data_1D2S
#
_model_server_result.job_id            E0H2i7KY2NBdTuR3-OQpzA 
_model_server_result.datetime_utc      '2024-11-13 15:56:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1d2s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    1D2S 
#
_exptl.entry_id    1D2S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              290.44 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-ALPHA-DIHYDROTESTOSTERONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1D2S 
_cell.length_a            104.04 
_cell.length_b            104.04 
_cell.length_c            84.43 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1D2S 
_symmetry.cell_setting             hexagonal 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 84.43 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 146 A CYS 164 1_555 A SG CYS 170 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc1 A OD1 ASP 38 A ASP 50 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? 
metalc ? metalc2 A OD2 ASP 38 A ASP 50 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc3 A O GLU 40 A GLU 52 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc4 A OD1 ASP 53 A ASP 65 1_555 C CA CA . A CA 501 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc5 A NE2 HIS 71 A HIS 83 1_555 C CA CA . A CA 501 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc6 A NE2 HIS 118 A HIS 136 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc7 A O ALA 142 A ALA 160 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc8 B CA CA . A CA 401 1_555 E O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc9 B CA CA . A CA 401 1_555 E O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc10 B CA CA . A CA 401 1_555 E O HOH . A HOH 649 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
#
_chem_comp.formula           'C19 H30 O2' 
_chem_comp.formula_weight    290.44 
_chem_comp.id                DHT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-ALPHA-DIHYDROTESTOSTERONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DHT sing 83 n n 
C1 C10 DHT sing 84 n n 
C1 H11 DHT sing 85 n n 
C1 H12 DHT sing 86 n n 
C2 C3 DHT sing 87 n n 
C2 H21 DHT sing 88 n n 
C2 H22 DHT sing 89 n n 
C3 O3 DHT doub 90 n n 
C3 C4 DHT sing 91 n n 
C4 C5 DHT sing 92 n n 
C4 H41 DHT sing 93 n n 
C4 H42 DHT sing 94 n n 
C5 C6 DHT sing 95 n n 
C5 C10 DHT sing 96 n n 
C5 H5 DHT sing 97 n n 
C6 C7 DHT sing 98 n n 
C6 H61 DHT sing 99 n n 
C6 H62 DHT sing 100 n n 
C7 C8 DHT sing 101 n n 
C7 H71 DHT sing 102 n n 
C7 H72 DHT sing 103 n n 
C8 C9 DHT sing 104 n n 
C8 C14 DHT sing 105 n n 
C8 H8 DHT sing 106 n n 
C9 C10 DHT sing 107 n n 
C9 C11 DHT sing 108 n n 
C9 H9 DHT sing 109 n n 
C10 C19 DHT sing 110 n n 
C11 C12 DHT sing 111 n n 
C11 H111 DHT sing 112 n n 
C11 H112 DHT sing 113 n n 
C12 C13 DHT sing 114 n n 
C12 H121 DHT sing 115 n n 
C12 H122 DHT sing 116 n n 
C13 C14 DHT sing 117 n n 
C13 C17 DHT sing 118 n n 
C13 C18 DHT sing 119 n n 
C14 C15 DHT sing 120 n n 
C14 H14 DHT sing 121 n n 
C15 C16 DHT sing 122 n n 
C15 H151 DHT sing 123 n n 
C15 H152 DHT sing 124 n n 
C16 C17 DHT sing 125 n n 
C16 H161 DHT sing 126 n n 
C16 H162 DHT sing 127 n n 
C17 O17 DHT sing 128 n n 
C17 H17 DHT sing 129 n n 
O17 HO7 DHT sing 130 n n 
C18 H181 DHT sing 131 n n 
C18 H182 DHT sing 132 n n 
C18 H183 DHT sing 133 n n 
C19 H191 DHT sing 134 n n 
C19 H192 DHT sing 135 n n 
C19 H193 DHT sing 136 n n 
#
_atom_sites.entry_id                     1D2S 
_atom_sites.fract_transf_matrix[1][1]    0.00961 
_atom_sites.fract_transf_matrix[1][2]    0.00555 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0111 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01184 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 401 401 CA IUM . 
C 2 CA A 1 501 501 CA IUM . 
D 3 DHT A 1 301 301 DHT DHT . 
E 4 HOH A 1 601 601 HOH HOH . 
E 4 HOH A 2 602 602 HOH HOH . 
E 4 HOH A 3 603 603 HOH HOH . 
E 4 HOH A 4 604 604 HOH HOH . 
E 4 HOH A 5 605 605 HOH HOH . 
E 4 HOH A 6 606 606 HOH HOH . 
E 4 HOH A 7 607 607 HOH HOH . 
E 4 HOH A 8 608 608 HOH HOH . 
E 4 HOH A 9 609 609 HOH HOH . 
E 4 HOH A 10 610 610 HOH HOH . 
E 4 HOH A 11 611 611 HOH HOH . 
E 4 HOH A 12 612 612 HOH HOH . 
E 4 HOH A 13 613 613 HOH HOH . 
E 4 HOH A 14 614 614 HOH HOH . 
E 4 HOH A 15 615 615 HOH HOH . 
E 4 HOH A 16 616 616 HOH HOH . 
E 4 HOH A 17 617 617 HOH HOH . 
E 4 HOH A 18 618 618 HOH HOH . 
E 4 HOH A 19 619 619 HOH HOH . 
E 4 HOH A 20 620 620 HOH HOH . 
E 4 HOH A 21 621 621 HOH HOH . 
E 4 HOH A 22 622 622 HOH HOH . 
E 4 HOH A 23 623 623 HOH HOH . 
E 4 HOH A 24 624 624 HOH HOH . 
E 4 HOH A 25 625 625 HOH HOH . 
E 4 HOH A 26 626 626 HOH HOH . 
E 4 HOH A 27 627 627 HOH HOH . 
E 4 HOH A 28 628 628 HOH HOH . 
E 4 HOH A 29 629 629 HOH HOH . 
E 4 HOH A 30 630 630 HOH HOH . 
E 4 HOH A 31 631 631 HOH HOH . 
E 4 HOH A 32 632 632 HOH HOH . 
E 4 HOH A 33 633 633 HOH HOH . 
E 4 HOH A 34 634 634 HOH HOH . 
E 4 HOH A 35 635 635 HOH HOH . 
E 4 HOH A 36 636 636 HOH HOH . 
E 4 HOH A 37 637 637 HOH HOH . 
E 4 HOH A 38 638 638 HOH HOH . 
E 4 HOH A 39 639 639 HOH HOH . 
E 4 HOH A 40 640 640 HOH HOH . 
E 4 HOH A 41 641 641 HOH HOH . 
E 4 HOH A 42 642 642 HOH HOH . 
E 4 HOH A 43 643 643 HOH HOH . 
E 4 HOH A 44 644 644 HOH HOH . 
E 4 HOH A 45 645 645 HOH HOH . 
E 4 HOH A 46 646 646 HOH HOH . 
E 4 HOH A 47 647 647 HOH HOH . 
E 4 HOH A 48 648 648 HOH HOH . 
E 4 HOH A 49 649 649 HOH HOH . 
E 4 HOH A 50 650 650 HOH HOH . 
E 4 HOH A 51 651 651 HOH HOH . 
E 4 HOH A 52 652 652 HOH HOH . 
E 4 HOH A 53 653 653 HOH HOH . 
E 4 HOH A 54 654 654 HOH HOH . 
E 4 HOH A 55 655 655 HOH HOH . 
E 4 HOH A 56 656 656 HOH HOH . 
E 4 HOH A 57 657 657 HOH HOH . 
E 4 HOH A 58 658 658 HOH HOH . 
E 4 HOH A 59 659 659 HOH HOH . 
E 4 HOH A 60 660 660 HOH HOH . 
E 4 HOH A 61 661 661 HOH HOH . 
E 4 HOH A 62 662 662 HOH HOH . 
E 4 HOH A 63 663 663 HOH HOH . 
E 4 HOH A 64 664 664 HOH HOH . 
E 4 HOH A 65 665 665 HOH HOH . 
E 4 HOH A 66 666 666 HOH HOH . 
E 4 HOH A 67 667 667 HOH HOH . 
E 4 HOH A 68 668 668 HOH HOH . 
E 4 HOH A 69 669 669 HOH HOH . 
E 4 HOH A 70 670 670 HOH HOH . 
E 4 HOH A 71 671 671 HOH HOH . 
E 4 HOH A 72 672 672 HOH HOH . 
E 4 HOH A 73 673 673 HOH HOH . 
E 4 HOH A 74 674 674 HOH HOH . 
E 4 HOH A 75 675 675 HOH HOH . 
E 4 HOH A 76 676 676 HOH HOH . 
E 4 HOH A 77 677 677 HOH HOH . 
E 4 HOH A 78 678 678 HOH HOH . 
E 4 HOH A 79 679 679 HOH HOH . 
E 4 HOH A 80 680 680 HOH HOH . 
E 4 HOH A 81 681 681 HOH HOH . 
E 4 HOH A 82 682 682 HOH HOH . 
E 4 HOH A 83 683 683 HOH HOH . 
E 4 HOH A 84 684 684 HOH HOH . 
E 4 HOH A 85 685 685 HOH HOH . 
E 4 HOH A 86 686 686 HOH HOH . 
E 4 HOH A 87 687 687 HOH HOH . 
E 4 HOH A 88 688 688 HOH HOH . 
E 4 HOH A 89 689 689 HOH HOH . 
E 4 HOH A 90 690 690 HOH HOH . 
E 4 HOH A 91 691 691 HOH HOH . 
E 4 HOH A 92 692 692 HOH HOH . 
E 4 HOH A 93 693 693 HOH HOH . 
E 4 HOH A 94 694 694 HOH HOH . 
E 4 HOH A 95 695 695 HOH HOH . 
E 4 HOH A 96 696 696 HOH HOH . 
E 4 HOH A 97 697 697 HOH HOH . 
E 4 HOH A 98 698 698 HOH HOH . 
E 4 HOH A 99 699 699 HOH HOH . 
E 4 HOH A 100 700 700 HOH HOH . 
E 4 HOH A 101 701 701 HOH HOH . 
E 4 HOH A 102 702 702 HOH HOH . 
E 4 HOH A 103 703 703 HOH HOH . 
E 4 HOH A 104 704 704 HOH HOH . 
E 4 HOH A 105 705 705 HOH HOH . 
E 4 HOH A 106 706 706 HOH HOH . 
E 4 HOH A 107 707 707 HOH HOH . 
E 4 HOH A 108 708 708 HOH HOH . 
E 4 HOH A 109 709 709 HOH HOH . 
E 4 HOH A 110 710 710 HOH HOH . 
E 4 HOH A 111 711 711 HOH HOH . 
E 4 HOH A 112 712 712 HOH HOH . 
E 4 HOH A 113 713 713 HOH HOH . 
E 4 HOH A 114 714 714 HOH HOH . 
E 4 HOH A 115 715 715 HOH HOH . 
E 4 HOH A 116 716 716 HOH HOH . 
E 4 HOH A 117 717 717 HOH HOH . 
E 4 HOH A 118 718 718 HOH HOH . 
E 4 HOH A 119 719 719 HOH HOH . 
E 4 HOH A 120 720 720 HOH HOH . 
E 4 HOH A 121 721 721 HOH HOH . 
E 4 HOH A 122 722 722 HOH HOH . 
E 4 HOH A 123 723 723 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DHT . . . D 3 24.117 10.029 30.871 1 17.32 ? C1 DHT 301 A 1 
HETATM 2 C C2 DHT . . . D 3 25.617 10.208 30.707 1 17.3 ? C2 DHT 301 A 1 
HETATM 3 C C3 DHT . . . D 3 25.924 11.688 30.926 1 19.79 ? C3 DHT 301 A 1 
HETATM 4 O O3 DHT . . . D 3 26.749 12.216 30.197 1 21.32 ? O3 DHT 301 A 1 
HETATM 5 C C4 DHT . . . D 3 25.328 12.355 32.098 1 18.05 ? C4 DHT 301 A 1 
HETATM 6 C C5 DHT . . . D 3 23.815 12.113 32.21 1 16.77 ? C5 DHT 301 A 1 
HETATM 7 C C6 DHT . . . D 3 23.168 12.812 33.411 1 17.19 ? C6 DHT 301 A 1 
HETATM 8 C C7 DHT . . . D 3 21.655 12.694 33.348 1 19 ? C7 DHT 301 A 1 
HETATM 9 C C8 DHT . . . D 3 21.215 11.215 33.253 1 17.37 ? C8 DHT 301 A 1 
HETATM 10 C C9 DHT . . . D 3 21.931 10.495 32.079 1 17.46 ? C9 DHT 301 A 1 
HETATM 11 C C10 DHT . . . D 3 23.482 10.586 32.152 1 15.32 ? C10 DHT 301 A 1 
HETATM 12 C C11 DHT . . . D 3 21.395 9.053 31.952 1 16.78 ? C11 DHT 301 A 1 
HETATM 13 C C12 DHT . . . D 3 19.895 8.869 31.912 1 17.85 ? C12 DHT 301 A 1 
HETATM 14 C C13 DHT . . . D 3 19.209 9.618 33.045 1 20.28 ? C13 DHT 301 A 1 
HETATM 15 C C14 DHT . . . D 3 19.714 11.076 33.065 1 16.73 ? C14 DHT 301 A 1 
HETATM 16 C C15 DHT . . . D 3 18.801 11.714 34.111 1 19.68 ? C15 DHT 301 A 1 
HETATM 17 C C16 DHT . . . D 3 17.427 11.093 33.807 1 17.48 ? C16 DHT 301 A 1 
HETATM 18 C C17 DHT . . . D 3 17.732 9.909 32.867 1 18.97 ? C17 DHT 301 A 1 
HETATM 19 O O17 DHT . . . D 3 16.863 8.809 33.148 1 24.09 ? O17 DHT 301 A 1 
HETATM 20 C C18 DHT . . . D 3 19.469 8.936 34.412 1 18.83 ? C18 DHT 301 A 1 
HETATM 21 C C19 DHT . . . D 3 24.006 9.879 33.424 1 16.18 ? C19 DHT 301 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           21 
#