data_1D2Z # _model_server_result.job_id n4xnO32rDAmg64QG_Ust2A _model_server_result.datetime_utc '2025-02-26 15:45:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1d2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":300}' # _entry.id 1D2Z # _exptl.entry_id 1D2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1D2Z _cell.length_a 58.123 _cell.length_b 87.495 _cell.length_c 117.662 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G 1 1 C,D,E,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 1D2Z _atom_sites.fract_transf_matrix[1][1] 0.017205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008499 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EPE C 1 300 1 EPE EPE . F 4 HOH A 1 130 2 HOH HOH . F 4 HOH A 2 131 3 HOH HOH . F 4 HOH A 3 132 4 HOH HOH . F 4 HOH A 4 133 10 HOH HOH . F 4 HOH A 5 134 11 HOH HOH . F 4 HOH A 6 135 12 HOH HOH . F 4 HOH A 7 136 13 HOH HOH . F 4 HOH A 8 137 30 HOH HOH . F 4 HOH A 9 138 33 HOH HOH . F 4 HOH A 10 139 51 HOH HOH . F 4 HOH A 11 140 54 HOH HOH . F 4 HOH A 12 141 58 HOH HOH . F 4 HOH A 13 142 69 HOH HOH . F 4 HOH A 14 143 78 HOH HOH . F 4 HOH A 15 144 79 HOH HOH . F 4 HOH A 16 145 81 HOH HOH . F 4 HOH A 17 146 82 HOH HOH . F 4 HOH A 18 147 84 HOH HOH . F 4 HOH A 19 148 85 HOH HOH . F 4 HOH A 20 149 86 HOH HOH . F 4 HOH A 21 150 87 HOH HOH . F 4 HOH A 22 151 88 HOH HOH . F 4 HOH A 23 152 90 HOH HOH . F 4 HOH A 24 153 91 HOH HOH . F 4 HOH A 25 154 92 HOH HOH . F 4 HOH A 26 155 93 HOH HOH . F 4 HOH A 27 156 94 HOH HOH . F 4 HOH A 28 157 95 HOH HOH . F 4 HOH A 29 158 108 HOH HOH . F 4 HOH A 30 159 111 HOH HOH . F 4 HOH A 31 160 112 HOH HOH . F 4 HOH A 32 161 113 HOH HOH . F 4 HOH A 33 162 114 HOH HOH . F 4 HOH A 34 163 117 HOH HOH . F 4 HOH A 35 164 120 HOH HOH . F 4 HOH A 36 165 121 HOH HOH . F 4 HOH A 37 166 122 HOH HOH . F 4 HOH A 38 167 137 HOH HOH . F 4 HOH A 39 168 140 HOH HOH . F 4 HOH A 40 169 142 HOH HOH . F 4 HOH A 41 170 144 HOH HOH . F 4 HOH A 42 171 145 HOH HOH . F 4 HOH A 43 172 146 HOH HOH . F 4 HOH A 44 173 149 HOH HOH . F 4 HOH A 45 174 154 HOH HOH . F 4 HOH A 46 175 156 HOH HOH . F 4 HOH A 47 176 157 HOH HOH . F 4 HOH A 48 177 158 HOH HOH . F 4 HOH A 49 178 170 HOH HOH . F 4 HOH A 50 179 171 HOH HOH . F 4 HOH A 51 180 175 HOH HOH . F 4 HOH A 52 181 181 HOH HOH . F 4 HOH A 53 182 213 HOH HOH . F 4 HOH A 54 183 214 HOH HOH . F 4 HOH A 55 184 215 HOH HOH . F 4 HOH A 56 185 254 HOH HOH . F 4 HOH A 57 186 255 HOH HOH . G 4 HOH B 1 176 1 HOH HOH . G 4 HOH B 2 177 5 HOH HOH . G 4 HOH B 3 178 6 HOH HOH . G 4 HOH B 4 179 7 HOH HOH . G 4 HOH B 5 180 8 HOH HOH . G 4 HOH B 6 181 9 HOH HOH . G 4 HOH B 7 182 14 HOH HOH . G 4 HOH B 8 183 15 HOH HOH . G 4 HOH B 9 184 16 HOH HOH . G 4 HOH B 10 185 17 HOH HOH . G 4 HOH B 11 186 18 HOH HOH . G 4 HOH B 12 187 19 HOH HOH . G 4 HOH B 13 188 20 HOH HOH . G 4 HOH B 14 189 21 HOH HOH . G 4 HOH B 15 190 22 HOH HOH . G 4 HOH B 16 191 23 HOH HOH . G 4 HOH B 17 192 24 HOH HOH . G 4 HOH B 18 193 25 HOH HOH . G 4 HOH B 19 194 26 HOH HOH . G 4 HOH B 20 195 32 HOH HOH . G 4 HOH B 21 196 34 HOH HOH . G 4 HOH B 22 197 35 HOH HOH . G 4 HOH B 23 198 50 HOH HOH . G 4 HOH B 24 199 52 HOH HOH . G 4 HOH B 25 200 74 HOH HOH . G 4 HOH B 26 201 83 HOH HOH . G 4 HOH B 27 202 97 HOH HOH . G 4 HOH B 28 203 99 HOH HOH . G 4 HOH B 29 204 102 HOH HOH . G 4 HOH B 30 205 106 HOH HOH . G 4 HOH B 31 206 107 HOH HOH . G 4 HOH B 32 207 115 HOH HOH . G 4 HOH B 33 208 116 HOH HOH . G 4 HOH B 34 209 124 HOH HOH . G 4 HOH B 35 210 126 HOH HOH . G 4 HOH B 36 211 128 HOH HOH . G 4 HOH B 37 212 129 HOH HOH . G 4 HOH B 38 213 130 HOH HOH . G 4 HOH B 39 214 131 HOH HOH . G 4 HOH B 40 215 134 HOH HOH . G 4 HOH B 41 216 135 HOH HOH . G 4 HOH B 42 217 143 HOH HOH . G 4 HOH B 43 218 147 HOH HOH . G 4 HOH B 44 219 148 HOH HOH . G 4 HOH B 45 220 150 HOH HOH . G 4 HOH B 46 221 151 HOH HOH . G 4 HOH B 47 222 161 HOH HOH . G 4 HOH B 48 223 162 HOH HOH . G 4 HOH B 49 224 164 HOH HOH . G 4 HOH B 50 225 165 HOH HOH . G 4 HOH B 51 226 183 HOH HOH . G 4 HOH B 52 227 188 HOH HOH . G 4 HOH B 53 228 189 HOH HOH . G 4 HOH B 54 229 192 HOH HOH . G 4 HOH B 55 230 193 HOH HOH . G 4 HOH B 56 231 194 HOH HOH . G 4 HOH B 57 232 195 HOH HOH . G 4 HOH B 58 233 199 HOH HOH . G 4 HOH B 59 234 200 HOH HOH . G 4 HOH B 60 235 203 HOH HOH . G 4 HOH B 61 236 212 HOH HOH . G 4 HOH B 62 237 222 HOH HOH . G 4 HOH B 63 238 224 HOH HOH . G 4 HOH B 64 239 225 HOH HOH . G 4 HOH B 65 240 226 HOH HOH . G 4 HOH B 66 241 227 HOH HOH . G 4 HOH B 67 242 228 HOH HOH . G 4 HOH B 68 243 229 HOH HOH . G 4 HOH B 69 244 230 HOH HOH . G 4 HOH B 70 245 231 HOH HOH . G 4 HOH B 71 246 233 HOH HOH . G 4 HOH B 72 247 247 HOH HOH . G 4 HOH B 73 248 249 HOH HOH . H 4 HOH C 1 301 36 HOH HOH . H 4 HOH C 2 302 37 HOH HOH . H 4 HOH C 3 303 38 HOH HOH . H 4 HOH C 4 304 39 HOH HOH . H 4 HOH C 5 305 40 HOH HOH . H 4 HOH C 6 306 41 HOH HOH . H 4 HOH C 7 307 42 HOH HOH . H 4 HOH C 8 308 45 HOH HOH . H 4 HOH C 9 309 46 HOH HOH . H 4 HOH C 10 310 47 HOH HOH . H 4 HOH C 11 311 49 HOH HOH . H 4 HOH C 12 312 53 HOH HOH . H 4 HOH C 13 313 55 HOH HOH . H 4 HOH C 14 314 56 HOH HOH . H 4 HOH C 15 315 57 HOH HOH . H 4 HOH C 16 316 71 HOH HOH . H 4 HOH C 17 317 80 HOH HOH . H 4 HOH C 18 318 96 HOH HOH . H 4 HOH C 19 319 98 HOH HOH . H 4 HOH C 20 320 101 HOH HOH . H 4 HOH C 21 321 139 HOH HOH . H 4 HOH C 22 322 152 HOH HOH . H 4 HOH C 23 323 153 HOH HOH . H 4 HOH C 24 324 155 HOH HOH . H 4 HOH C 25 325 159 HOH HOH . H 4 HOH C 26 326 167 HOH HOH . H 4 HOH C 27 327 168 HOH HOH . H 4 HOH C 28 328 177 HOH HOH . H 4 HOH C 29 329 196 HOH HOH . H 4 HOH C 30 330 197 HOH HOH . H 4 HOH C 31 331 198 HOH HOH . H 4 HOH C 32 332 201 HOH HOH . H 4 HOH C 33 333 202 HOH HOH . H 4 HOH C 34 334 223 HOH HOH . H 4 HOH C 35 335 232 HOH HOH . H 4 HOH C 36 336 236 HOH HOH . H 4 HOH C 37 337 237 HOH HOH . H 4 HOH C 38 338 240 HOH HOH . H 4 HOH C 39 339 245 HOH HOH . H 4 HOH C 40 340 250 HOH HOH . H 4 HOH C 41 341 257 HOH HOH . H 4 HOH C 42 342 258 HOH HOH . H 4 HOH C 43 343 259 HOH HOH . H 4 HOH C 44 344 260 HOH HOH . H 4 HOH C 45 345 261 HOH HOH . H 4 HOH C 46 346 262 HOH HOH . H 4 HOH C 47 347 264 HOH HOH . H 4 HOH C 48 348 265 HOH HOH . H 4 HOH C 49 349 266 HOH HOH . I 4 HOH D 1 176 27 HOH HOH . I 4 HOH D 2 177 28 HOH HOH . I 4 HOH D 3 178 29 HOH HOH . I 4 HOH D 4 179 31 HOH HOH . I 4 HOH D 5 180 43 HOH HOH . I 4 HOH D 6 181 44 HOH HOH . I 4 HOH D 7 182 48 HOH HOH . I 4 HOH D 8 183 59 HOH HOH . I 4 HOH D 9 184 60 HOH HOH . I 4 HOH D 10 185 61 HOH HOH . I 4 HOH D 11 186 62 HOH HOH . I 4 HOH D 12 187 63 HOH HOH . I 4 HOH D 13 188 64 HOH HOH . I 4 HOH D 14 189 65 HOH HOH . I 4 HOH D 15 190 66 HOH HOH . I 4 HOH D 16 191 67 HOH HOH . I 4 HOH D 17 192 68 HOH HOH . I 4 HOH D 18 193 70 HOH HOH . I 4 HOH D 19 194 72 HOH HOH . I 4 HOH D 20 195 73 HOH HOH . I 4 HOH D 21 196 75 HOH HOH . I 4 HOH D 22 197 76 HOH HOH . I 4 HOH D 23 198 77 HOH HOH . I 4 HOH D 24 199 89 HOH HOH . I 4 HOH D 25 200 100 HOH HOH . I 4 HOH D 26 201 103 HOH HOH . I 4 HOH D 27 202 104 HOH HOH . I 4 HOH D 28 203 105 HOH HOH . I 4 HOH D 29 204 109 HOH HOH . I 4 HOH D 30 205 110 HOH HOH . I 4 HOH D 31 206 118 HOH HOH . I 4 HOH D 32 207 119 HOH HOH . I 4 HOH D 33 208 123 HOH HOH . I 4 HOH D 34 209 125 HOH HOH . I 4 HOH D 35 210 127 HOH HOH . I 4 HOH D 36 211 132 HOH HOH . I 4 HOH D 37 212 133 HOH HOH . I 4 HOH D 38 213 136 HOH HOH . I 4 HOH D 39 214 138 HOH HOH . I 4 HOH D 40 215 141 HOH HOH . I 4 HOH D 41 216 160 HOH HOH . I 4 HOH D 42 217 163 HOH HOH . I 4 HOH D 43 218 166 HOH HOH . I 4 HOH D 44 219 169 HOH HOH . I 4 HOH D 45 220 172 HOH HOH . I 4 HOH D 46 221 173 HOH HOH . I 4 HOH D 47 222 174 HOH HOH . I 4 HOH D 48 223 176 HOH HOH . I 4 HOH D 49 224 178 HOH HOH . I 4 HOH D 50 225 179 HOH HOH . I 4 HOH D 51 226 180 HOH HOH . I 4 HOH D 52 227 182 HOH HOH . I 4 HOH D 53 228 184 HOH HOH . I 4 HOH D 54 229 185 HOH HOH . I 4 HOH D 55 230 186 HOH HOH . I 4 HOH D 56 231 187 HOH HOH . I 4 HOH D 57 232 190 HOH HOH . I 4 HOH D 58 233 191 HOH HOH . I 4 HOH D 59 234 204 HOH HOH . I 4 HOH D 60 235 205 HOH HOH . I 4 HOH D 61 236 206 HOH HOH . I 4 HOH D 62 237 207 HOH HOH . I 4 HOH D 63 238 208 HOH HOH . I 4 HOH D 64 239 209 HOH HOH . I 4 HOH D 65 240 210 HOH HOH . I 4 HOH D 66 241 211 HOH HOH . I 4 HOH D 67 242 216 HOH HOH . I 4 HOH D 68 243 217 HOH HOH . I 4 HOH D 69 244 218 HOH HOH . I 4 HOH D 70 245 219 HOH HOH . I 4 HOH D 71 246 220 HOH HOH . I 4 HOH D 72 247 221 HOH HOH . I 4 HOH D 73 248 234 HOH HOH . I 4 HOH D 74 249 235 HOH HOH . I 4 HOH D 75 250 238 HOH HOH . I 4 HOH D 76 251 239 HOH HOH . I 4 HOH D 77 252 241 HOH HOH . I 4 HOH D 78 253 242 HOH HOH . I 4 HOH D 79 254 243 HOH HOH . I 4 HOH D 80 255 244 HOH HOH . I 4 HOH D 81 256 246 HOH HOH . I 4 HOH D 82 257 248 HOH HOH . I 4 HOH D 83 258 251 HOH HOH . I 4 HOH D 84 259 252 HOH HOH . I 4 HOH D 85 260 253 HOH HOH . I 4 HOH D 86 261 256 HOH HOH . I 4 HOH D 87 262 263 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 3 18.568 29.241 0.867 1 68.2 ? N1 EPE 300 C 1 HETATM 2 C C2 EPE . . . E 3 18.08 29.443 2.26 1 69.74 ? C2 EPE 300 C 1 HETATM 3 C C3 EPE . . . E 3 16.604 29.112 2.393 1 70.29 ? C3 EPE 300 C 1 HETATM 4 N N4 EPE . . . E 3 15.713 29.789 1.399 1 72.22 ? N4 EPE 300 C 1 HETATM 5 C C5 EPE . . . E 3 16.208 29.508 0.005 1 70.66 ? C5 EPE 300 C 1 HETATM 6 C C6 EPE . . . E 3 17.685 29.925 -0.125 1 70.15 ? C6 EPE 300 C 1 HETATM 7 C C7 EPE . . . E 3 14.278 29.41 1.561 1 72.89 ? C7 EPE 300 C 1 HETATM 8 C C8 EPE . . . E 3 13.825 29.717 2.992 1 73.65 ? C8 EPE 300 C 1 HETATM 9 O O8 EPE . . . E 3 14.406 30.799 3.656 1 74.25 ? O8 EPE 300 C 1 HETATM 10 C C9 EPE . . . E 3 19.985 29.682 0.74 1 66.3 ? C9 EPE 300 C 1 HETATM 11 C C10 EPE . . . E 3 20.466 29.401 -0.682 1 64.02 ? C10 EPE 300 C 1 HETATM 12 S S EPE . . . E 3 22.188 29.92 -0.878 1 63.33 ? S EPE 300 C 1 HETATM 13 O O1S EPE . . . E 3 22.539 29.609 -2.264 1 59.86 ? O1S EPE 300 C 1 HETATM 14 O O2S EPE . . . E 3 23.007 29.494 0.22 1 63.59 ? O2S EPE 300 C 1 HETATM 15 O O3S EPE . . . E 3 22.083 31.581 -0.879 1 64.05 ? O3S EPE 300 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #