data_1D5A
#
_model_server_result.job_id            fGV1cXlMxkbiNsdPlKwJFg 
_model_server_result.datetime_utc      '2024-11-21 23:19:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1d5a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":4787}' 
#
_entry.id    1D5A 
#
_exptl.entry_id    1D5A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1D5A 
_cell.length_a            64.8 
_cell.length_b            107.6 
_cell.length_c            153.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1D5A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 428 A CYS 428 1_555 A SG CYS 442 A CYS 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf2 A SG CYS 506 A CYS 506 1_555 A SG CYS 509 A CYS 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 K MG MG . A MG 5030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc2 A OD2 ASP 141 A ASP 141 1_555 L MG MG . A MG 5031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc3 A OD1 ASP 315 A ASP 315 1_555 K MG MG . A MG 5030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc4 K MG MG . A MG 5030 1_555 L MG MG . A MG 5031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     1D5A 
_atom_sites.fract_transf_matrix[1][1]    0.015432 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009294 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006527 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 4004 4004 SO4 SO1 . 
C 2 SO4 A 1 4091 4091 SO4 SO1 . 
D 2 SO4 A 1 4130 4130 SO4 SO1 . 
E 2 SO4 A 1 4487 4487 SO4 SO1 . 
F 2 SO4 A 1 4606 4606 SO4 SO1 . 
G 2 SO4 A 1 4730 4730 SO4 SO1 . 
H 2 SO4 A 1 4787 4787 SO4 SO1 . 
I 2 SO4 A 1 4706 4706 SO4 SO1 . 
J 2 SO4 A 1 4587 4587 SO4 SO1 . 
K 3 MG A 1 5030 5030 MG MG2 . 
L 3 MG A 1 5031 5031 MG MG2 . 
M 4 HOH A 1 3005 3005 HOH TIP . 
M 4 HOH A 2 3006 3006 HOH TIP . 
M 4 HOH A 3 3007 3007 HOH TIP . 
M 4 HOH A 4 3008 3008 HOH TIP . 
M 4 HOH A 5 3009 3009 HOH TIP . 
M 4 HOH A 6 3010 3010 HOH TIP . 
M 4 HOH A 7 3011 3011 HOH TIP . 
M 4 HOH A 8 3012 3012 HOH TIP . 
M 4 HOH A 9 3013 3013 HOH TIP . 
M 4 HOH A 10 3014 3014 HOH TIP . 
M 4 HOH A 11 3015 3015 HOH TIP . 
M 4 HOH A 12 3016 3016 HOH TIP . 
M 4 HOH A 13 3017 3017 HOH TIP . 
M 4 HOH A 14 3019 3019 HOH TIP . 
M 4 HOH A 15 3020 3020 HOH TIP . 
M 4 HOH A 16 3021 3021 HOH TIP . 
M 4 HOH A 17 3022 3022 HOH TIP . 
M 4 HOH A 18 3023 3023 HOH TIP . 
M 4 HOH A 19 3024 3024 HOH TIP . 
M 4 HOH A 20 3025 3025 HOH TIP . 
M 4 HOH A 21 3026 3026 HOH TIP . 
M 4 HOH A 22 3029 3029 HOH TIP . 
M 4 HOH A 23 3030 3030 HOH TIP . 
M 4 HOH A 24 3031 3031 HOH TIP . 
M 4 HOH A 25 3033 3033 HOH TIP . 
M 4 HOH A 26 3034 3034 HOH TIP . 
M 4 HOH A 27 3035 3035 HOH TIP . 
M 4 HOH A 28 3037 3037 HOH TIP . 
M 4 HOH A 29 3038 3038 HOH TIP . 
M 4 HOH A 30 3039 3039 HOH TIP . 
M 4 HOH A 31 3040 3040 HOH TIP . 
M 4 HOH A 32 3041 3041 HOH TIP . 
M 4 HOH A 33 3043 3043 HOH TIP . 
M 4 HOH A 34 3044 3044 HOH TIP . 
M 4 HOH A 35 3045 3045 HOH TIP . 
M 4 HOH A 36 3046 3046 HOH TIP . 
M 4 HOH A 37 3047 3047 HOH TIP . 
M 4 HOH A 38 3048 3048 HOH TIP . 
M 4 HOH A 39 3049 3049 HOH TIP . 
M 4 HOH A 40 3050 3050 HOH TIP . 
M 4 HOH A 41 3051 3051 HOH TIP . 
M 4 HOH A 42 3052 3052 HOH TIP . 
M 4 HOH A 43 3053 3053 HOH TIP . 
M 4 HOH A 44 3054 3054 HOH TIP . 
M 4 HOH A 45 3055 3055 HOH TIP . 
M 4 HOH A 46 3056 3056 HOH TIP . 
M 4 HOH A 47 3057 3057 HOH TIP . 
M 4 HOH A 48 3058 3058 HOH TIP . 
M 4 HOH A 49 3059 3059 HOH TIP . 
M 4 HOH A 50 3060 3060 HOH TIP . 
M 4 HOH A 51 3061 3061 HOH TIP . 
M 4 HOH A 52 3062 3062 HOH TIP . 
M 4 HOH A 53 3064 3064 HOH TIP . 
M 4 HOH A 54 3065 3065 HOH TIP . 
M 4 HOH A 55 3066 3066 HOH TIP . 
M 4 HOH A 56 3067 3067 HOH TIP . 
M 4 HOH A 57 3068 3068 HOH TIP . 
M 4 HOH A 58 3069 3069 HOH TIP . 
M 4 HOH A 59 3070 3070 HOH TIP . 
M 4 HOH A 60 3071 3071 HOH TIP . 
M 4 HOH A 61 3072 3072 HOH TIP . 
M 4 HOH A 62 3073 3073 HOH TIP . 
M 4 HOH A 63 3074 3074 HOH TIP . 
M 4 HOH A 64 3075 3075 HOH TIP . 
M 4 HOH A 65 3076 3076 HOH TIP . 
M 4 HOH A 66 3077 3077 HOH TIP . 
M 4 HOH A 67 3078 3078 HOH TIP . 
M 4 HOH A 68 3079 3079 HOH TIP . 
M 4 HOH A 69 3080 3080 HOH TIP . 
M 4 HOH A 70 3082 3082 HOH TIP . 
M 4 HOH A 71 3083 3083 HOH TIP . 
M 4 HOH A 72 3084 3084 HOH TIP . 
M 4 HOH A 73 3085 3085 HOH TIP . 
M 4 HOH A 74 3086 3086 HOH TIP . 
M 4 HOH A 75 3087 3087 HOH TIP . 
M 4 HOH A 76 3088 3088 HOH TIP . 
M 4 HOH A 77 3089 3089 HOH TIP . 
M 4 HOH A 78 3090 3090 HOH TIP . 
M 4 HOH A 79 3091 3091 HOH TIP . 
M 4 HOH A 80 3122 3122 HOH TIP . 
M 4 HOH A 81 3123 3123 HOH TIP . 
M 4 HOH A 82 3124 3124 HOH TIP . 
M 4 HOH A 83 3125 3125 HOH TIP . 
M 4 HOH A 84 3126 3126 HOH TIP . 
M 4 HOH A 85 3127 3127 HOH TIP . 
M 4 HOH A 86 3128 3128 HOH TIP . 
M 4 HOH A 87 3129 3129 HOH TIP . 
M 4 HOH A 88 3131 3131 HOH TIP . 
M 4 HOH A 89 3132 3132 HOH TIP . 
M 4 HOH A 90 3133 3133 HOH TIP . 
M 4 HOH A 91 3134 3134 HOH TIP . 
M 4 HOH A 92 3135 3135 HOH TIP . 
M 4 HOH A 93 3136 3136 HOH TIP . 
M 4 HOH A 94 3137 3137 HOH TIP . 
M 4 HOH A 95 3138 3138 HOH TIP . 
M 4 HOH A 96 3139 3139 HOH TIP . 
M 4 HOH A 97 3140 3140 HOH TIP . 
M 4 HOH A 98 3141 3141 HOH TIP . 
M 4 HOH A 99 3142 3142 HOH TIP . 
M 4 HOH A 100 3143 3143 HOH TIP . 
M 4 HOH A 101 3144 3144 HOH TIP . 
M 4 HOH A 102 3145 3145 HOH TIP . 
M 4 HOH A 103 3146 3146 HOH TIP . 
M 4 HOH A 104 3147 3147 HOH TIP . 
M 4 HOH A 105 3148 3148 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . H 2 13.985 23.525 13.869 1 139.19 ? S SO4 4787 A 1 
HETATM 2 O O1 SO4 . . . H 2 13.227 23.177 12.672 1 139.14 ? O1 SO4 4787 A 1 
HETATM 3 O O2 SO4 . . . H 2 13.088 24.042 14.885 1 139.11 ? O2 SO4 4787 A 1 
HETATM 4 O O3 SO4 . . . H 2 14.667 22.356 14.394 1 139.24 ? O3 SO4 4787 A 1 
HETATM 5 O O4 SO4 . . . H 2 14.982 24.545 13.558 1 139.17 ? O4 SO4 4787 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#