data_1D7H # _model_server_result.job_id FImmZiUUjK0cSU8UNAVnBQ _model_server_result.datetime_utc '2024-10-18 15:29:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1d7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 1D7H # _exptl.entry_id 1D7H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96 _cell.angle_gamma 90 _cell.entry_id 1D7H _cell.length_a 102.8 _cell.length_b 36.45 _cell.length_c 56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA,PQS dimeric 2 software_defined_assembly 3 PQS dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,C,D,E,I 3 1,2 B,F,G,H,J 4 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 102.8 0 0 3 'crystal symmetry operation' 2_654 -x+1,y,-z-1 -1 0 0 0 1 0 0 0 -1 108.653594 0 -55.693226 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N HN1 NH4 sing 246 n n N HN2 NH4 sing 247 n n N HN3 NH4 sing 248 n n N HN4 NH4 sing 249 n n # _atom_sites.entry_id 1D7H _atom_sites.fract_transf_matrix[1][1] 0.009728 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NH4 A 1 401 1 NH4 NH4 . D 3 SO4 A 1 403 3 SO4 SO4 . E 4 DMS A 1 301 1 DMS DMS . F 2 NH4 B 1 402 2 NH4 NH4 . G 3 SO4 B 1 404 4 SO4 SO4 . H 4 DMS B 1 302 2 DMS DMS . I 5 HOH A 1 404 4 HOH HOH . I 5 HOH A 2 405 6 HOH HOH . I 5 HOH A 3 406 8 HOH HOH . I 5 HOH A 4 407 10 HOH HOH . I 5 HOH A 5 408 12 HOH HOH . I 5 HOH A 6 409 13 HOH HOH . I 5 HOH A 7 410 14 HOH HOH . I 5 HOH A 8 411 20 HOH HOH . I 5 HOH A 9 412 22 HOH HOH . I 5 HOH A 10 413 25 HOH HOH . I 5 HOH A 11 414 27 HOH HOH . I 5 HOH A 12 415 31 HOH HOH . I 5 HOH A 13 416 33 HOH HOH . I 5 HOH A 14 417 37 HOH HOH . I 5 HOH A 15 418 39 HOH HOH . I 5 HOH A 16 419 41 HOH HOH . I 5 HOH A 17 420 43 HOH HOH . I 5 HOH A 18 421 44 HOH HOH . I 5 HOH A 19 422 47 HOH HOH . I 5 HOH A 20 423 53 HOH HOH . I 5 HOH A 21 424 55 HOH HOH . I 5 HOH A 22 425 57 HOH HOH . I 5 HOH A 23 426 58 HOH HOH . I 5 HOH A 24 427 60 HOH HOH . I 5 HOH A 25 428 63 HOH HOH . I 5 HOH A 26 429 69 HOH HOH . I 5 HOH A 27 430 78 HOH HOH . I 5 HOH A 28 431 82 HOH HOH . I 5 HOH A 29 432 83 HOH HOH . I 5 HOH A 30 433 84 HOH HOH . I 5 HOH A 31 434 86 HOH HOH . I 5 HOH A 32 435 90 HOH HOH . I 5 HOH A 33 436 91 HOH HOH . I 5 HOH A 34 437 93 HOH HOH . I 5 HOH A 35 438 94 HOH HOH . I 5 HOH A 36 439 95 HOH HOH . I 5 HOH A 37 440 96 HOH HOH . I 5 HOH A 38 441 102 HOH HOH . I 5 HOH A 39 442 104 HOH HOH . I 5 HOH A 40 443 105 HOH HOH . I 5 HOH A 41 444 106 HOH HOH . I 5 HOH A 42 445 107 HOH HOH . I 5 HOH A 43 446 109 HOH HOH . I 5 HOH A 44 447 111 HOH HOH . I 5 HOH A 45 448 113 HOH HOH . I 5 HOH A 46 449 118 HOH HOH . I 5 HOH A 47 450 120 HOH HOH . I 5 HOH A 48 451 124 HOH HOH . I 5 HOH A 49 452 125 HOH HOH . I 5 HOH A 50 453 126 HOH HOH . I 5 HOH A 51 454 128 HOH HOH . I 5 HOH A 52 455 129 HOH HOH . I 5 HOH A 53 456 130 HOH HOH . I 5 HOH A 54 457 131 HOH HOH . I 5 HOH A 55 458 133 HOH HOH . I 5 HOH A 56 459 134 HOH HOH . I 5 HOH A 57 460 140 HOH HOH . I 5 HOH A 58 461 144 HOH HOH . I 5 HOH A 59 462 147 HOH HOH . I 5 HOH A 60 463 152 HOH HOH . I 5 HOH A 61 464 154 HOH HOH . I 5 HOH A 62 465 164 HOH HOH . I 5 HOH A 63 466 166 HOH HOH . I 5 HOH A 64 467 167 HOH HOH . I 5 HOH A 65 468 170 HOH HOH . I 5 HOH A 66 469 172 HOH HOH . I 5 HOH A 67 470 174 HOH HOH . I 5 HOH A 68 471 175 HOH HOH . I 5 HOH A 69 472 178 HOH HOH . I 5 HOH A 70 473 179 HOH HOH . I 5 HOH A 71 474 180 HOH HOH . I 5 HOH A 72 475 188 HOH HOH . I 5 HOH A 73 476 190 HOH HOH . I 5 HOH A 74 477 195 HOH HOH . J 5 HOH B 1 405 1 HOH HOH . J 5 HOH B 2 406 2 HOH HOH . J 5 HOH B 3 407 3 HOH HOH . J 5 HOH B 4 408 5 HOH HOH . J 5 HOH B 5 409 7 HOH HOH . J 5 HOH B 6 410 9 HOH HOH . J 5 HOH B 7 411 15 HOH HOH . J 5 HOH B 8 412 16 HOH HOH . J 5 HOH B 9 413 18 HOH HOH . J 5 HOH B 10 414 19 HOH HOH . J 5 HOH B 11 415 24 HOH HOH . J 5 HOH B 12 416 26 HOH HOH . J 5 HOH B 13 417 29 HOH HOH . J 5 HOH B 14 418 30 HOH HOH . J 5 HOH B 15 419 36 HOH HOH . J 5 HOH B 16 420 38 HOH HOH . J 5 HOH B 17 421 40 HOH HOH . J 5 HOH B 18 422 45 HOH HOH . J 5 HOH B 19 423 46 HOH HOH . J 5 HOH B 20 424 48 HOH HOH . J 5 HOH B 21 425 49 HOH HOH . J 5 HOH B 22 426 50 HOH HOH . J 5 HOH B 23 427 51 HOH HOH . J 5 HOH B 24 428 56 HOH HOH . J 5 HOH B 25 429 59 HOH HOH . J 5 HOH B 26 430 66 HOH HOH . J 5 HOH B 27 431 67 HOH HOH . J 5 HOH B 28 432 70 HOH HOH . J 5 HOH B 29 433 73 HOH HOH . J 5 HOH B 30 434 74 HOH HOH . J 5 HOH B 31 435 76 HOH HOH . J 5 HOH B 32 436 77 HOH HOH . J 5 HOH B 33 437 79 HOH HOH . J 5 HOH B 34 438 80 HOH HOH . J 5 HOH B 35 439 81 HOH HOH . J 5 HOH B 36 440 85 HOH HOH . J 5 HOH B 37 441 88 HOH HOH . J 5 HOH B 38 442 92 HOH HOH . J 5 HOH B 39 443 97 HOH HOH . J 5 HOH B 40 444 103 HOH HOH . J 5 HOH B 41 445 108 HOH HOH . J 5 HOH B 42 446 114 HOH HOH . J 5 HOH B 43 447 116 HOH HOH . J 5 HOH B 44 448 121 HOH HOH . J 5 HOH B 45 449 127 HOH HOH . J 5 HOH B 46 450 135 HOH HOH . J 5 HOH B 47 451 138 HOH HOH . J 5 HOH B 48 452 139 HOH HOH . J 5 HOH B 49 453 141 HOH HOH . J 5 HOH B 50 454 146 HOH HOH . J 5 HOH B 51 455 148 HOH HOH . J 5 HOH B 52 456 149 HOH HOH . J 5 HOH B 53 457 150 HOH HOH . J 5 HOH B 54 458 153 HOH HOH . J 5 HOH B 55 459 156 HOH HOH . J 5 HOH B 56 460 158 HOH HOH . J 5 HOH B 57 461 160 HOH HOH . J 5 HOH B 58 462 161 HOH HOH . J 5 HOH B 59 463 163 HOH HOH . J 5 HOH B 60 464 169 HOH HOH . J 5 HOH B 61 465 171 HOH HOH . J 5 HOH B 62 466 176 HOH HOH . J 5 HOH B 63 467 177 HOH HOH . J 5 HOH B 64 468 182 HOH HOH . J 5 HOH B 65 469 183 HOH HOH . J 5 HOH B 66 470 184 HOH HOH . J 5 HOH B 67 471 186 HOH HOH . J 5 HOH B 68 472 187 HOH HOH . J 5 HOH B 69 473 192 HOH HOH . J 5 HOH B 70 474 194 HOH HOH . J 5 HOH B 71 475 196 HOH HOH . J 5 HOH B 72 476 198 HOH HOH . J 5 HOH B 73 477 200 HOH HOH . J 5 HOH B 74 478 202 HOH HOH . J 5 HOH B 75 479 204 HOH HOH . J 5 HOH B 76 480 207 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol N _atom_site.label_atom_id N _atom_site.label_comp_id NH4 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 54.321 _atom_site.Cartn_y -29.123 _atom_site.Cartn_z -27.804 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 17.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id N _atom_site.auth_comp_id NH4 _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #