data_1D8E # _model_server_result.job_id zCMg9Zxoxawcvz1KUX_XOg _model_server_result.datetime_utc '2024-11-24 09:41:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1d8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3002}' # _entry.id 1D8E # _exptl.entry_id 1D8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'non-reactive FPP analog (FPT Inhibitor II, Calbiochem) Manne, V. et al. & Biller, S.A. (1995) Drug Dev. Res. 34,pg 121-137' _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1D8E _cell.length_a 171.411 _cell.length_b 171.411 _cell.length_c 69.663 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 1D8E _atom_sites.fract_transf_matrix[1][1] 0.005834 _atom_sites.fract_transf_matrix[1][2] 0.003368 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014355 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ACT B 1 3002 3002 ACT ACT . E 5 FII B 1 3003 1 FII FII . F 6 HOH A 1 1004 1004 HOH HOH . F 6 HOH A 2 1007 1007 HOH HOH . F 6 HOH A 3 1008 1008 HOH HOH . F 6 HOH A 4 1012 1012 HOH HOH . F 6 HOH A 5 1014 1014 HOH HOH . F 6 HOH A 6 1016 1016 HOH HOH . F 6 HOH A 7 1018 1018 HOH HOH . F 6 HOH A 8 1019 1019 HOH HOH . F 6 HOH A 9 1020 1020 HOH HOH . F 6 HOH A 10 1021 1021 HOH HOH . F 6 HOH A 11 1022 1022 HOH HOH . F 6 HOH A 12 1027 1027 HOH HOH . F 6 HOH A 13 1029 1029 HOH HOH . F 6 HOH A 14 1030 1030 HOH HOH . F 6 HOH A 15 1035 1035 HOH HOH . F 6 HOH A 16 1036 1036 HOH HOH . F 6 HOH A 17 1040 1040 HOH HOH . F 6 HOH A 18 1042 1042 HOH HOH . F 6 HOH A 19 1044 1044 HOH HOH . F 6 HOH A 20 1047 1047 HOH HOH . F 6 HOH A 21 1049 1049 HOH HOH . F 6 HOH A 22 1051 1051 HOH HOH . F 6 HOH A 23 1060 1060 HOH HOH . F 6 HOH A 24 1061 1061 HOH HOH . F 6 HOH A 25 1062 1062 HOH HOH . F 6 HOH A 26 1063 1063 HOH HOH . F 6 HOH A 27 1067 1067 HOH HOH . F 6 HOH A 28 1071 1071 HOH HOH . F 6 HOH A 29 1072 1072 HOH HOH . F 6 HOH A 30 1075 1075 HOH HOH . F 6 HOH A 31 1077 1077 HOH HOH . F 6 HOH A 32 1080 1080 HOH HOH . F 6 HOH A 33 1082 1082 HOH HOH . F 6 HOH A 34 1083 1083 HOH HOH . F 6 HOH A 35 1085 1085 HOH HOH . F 6 HOH A 36 1087 1087 HOH HOH . F 6 HOH A 37 1089 1089 HOH HOH . F 6 HOH A 38 1106 1106 HOH HOH . F 6 HOH A 39 1150 1150 HOH HOH . G 6 HOH B 1 1003 1003 HOH HOH . G 6 HOH B 2 1005 1005 HOH HOH . G 6 HOH B 3 1006 1006 HOH HOH . G 6 HOH B 4 1009 1009 HOH HOH . G 6 HOH B 5 1010 1010 HOH HOH . G 6 HOH B 6 1011 1011 HOH HOH . G 6 HOH B 7 1013 1013 HOH HOH . G 6 HOH B 8 1015 1015 HOH HOH . G 6 HOH B 9 1017 1017 HOH HOH . G 6 HOH B 10 1026 1026 HOH HOH . G 6 HOH B 11 1028 1028 HOH HOH . G 6 HOH B 12 1031 1031 HOH HOH . G 6 HOH B 13 1034 1034 HOH HOH . G 6 HOH B 14 1038 1038 HOH HOH . G 6 HOH B 15 1039 1039 HOH HOH . G 6 HOH B 16 1041 1041 HOH HOH . G 6 HOH B 17 1045 1045 HOH HOH . G 6 HOH B 18 1046 1046 HOH HOH . G 6 HOH B 19 1048 1048 HOH HOH . G 6 HOH B 20 1053 1053 HOH HOH . G 6 HOH B 21 1054 1054 HOH HOH . G 6 HOH B 22 1056 1056 HOH HOH . G 6 HOH B 23 1059 1059 HOH HOH . G 6 HOH B 24 1064 1064 HOH HOH . G 6 HOH B 25 1069 1069 HOH HOH . G 6 HOH B 26 1070 1070 HOH HOH . G 6 HOH B 27 1074 1074 HOH HOH . G 6 HOH B 28 1079 1079 HOH HOH . G 6 HOH B 29 1086 1086 HOH HOH . G 6 HOH B 30 1088 1088 HOH HOH . G 6 HOH B 31 1104 1104 HOH HOH . G 6 HOH B 32 1140 1140 HOH HOH . G 6 HOH B 33 1170 1170 HOH HOH . G 6 HOH B 34 1172 1172 HOH HOH . G 6 HOH B 35 1173 1173 HOH HOH . H 6 HOH P 1 1171 1171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 4 94.376 7.284 24.995 1 30.8 ? C ACT 3002 B 1 HETATM 2 O O ACT . . . D 4 95.553 6.776 25.33 1 30.11 ? O ACT 3002 B 1 HETATM 3 O OXT ACT . . . D 4 93.203 6.831 25.307 1 25.74 ? OXT ACT 3002 B 1 HETATM 4 C CH3 ACT . . . D 4 94.487 8.556 24.14 1 30.59 ? CH3 ACT 3002 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #