data_1D8X
#
_model_server_result.job_id            J9g5qD_3JqhG9nK98qekwQ 
_model_server_result.datetime_utc      '2025-03-03 00:11:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1d8x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":23}' 
#
_entry.id    1D8X 
#
_exptl.entry_id    1D8X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.38 
_cell.angle_gamma         90 
_cell.entry_id            1D8X 
_cell.length_a            62.784 
_cell.length_b            35.685 
_cell.length_c            22.466 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1D8X 
_symmetry.cell_setting             monoclinic 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OP2 DA 5 A DA 5 1_555 C MG MG . A MG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
metalc ? metalc2 A OP1 DG 9 A DG 9 1_555 D MG MG . A MG 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc3 C MG MG . A MG 22 1_555 F O HOH . A HOH 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc4 C MG MG . A MG 22 1_555 F O HOH . A HOH 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc5 C MG MG . A MG 22 1_555 F O HOH . A HOH 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc6 C MG MG . A MG 22 1_555 F O HOH . A HOH 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc7 C MG MG . A MG 22 1_555 F O HOH . A HOH 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc8 D MG MG . A MG 23 1_555 F O HOH . A HOH 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc9 D MG MG . A MG 23 1_555 F O HOH . A HOH 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc10 D MG MG . A MG 23 1_555 F O HOH . A HOH 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc11 D MG MG . A MG 23 1_555 F O HOH . A HOH 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc12 D MG MG . A MG 23 1_555 F O HOH . A HOH 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog7 A N2 DG 3 A DG 3 1_555 B N7 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog8 A N3 DG 3 A DG 3 1_555 B N6 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog9 A N6 DA 4 A DA 4 1_555 B N3 DG 7 B DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog10 A N7 DA 4 A DA 4 1_555 B N2 DG 7 B DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N1 DA 5 A DA 5 1_555 B N3 DT 6 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N6 DA 5 A DA 5 1_555 B O4 DT 6 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N3 DT 6 A DT 6 1_555 B N1 DA 5 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O4 DT 6 A DT 6 1_555 B N6 DA 5 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog15 A N2 DG 7 A DG 7 1_555 B N7 DA 4 B DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog16 A N3 DG 7 A DG 7 1_555 B N6 DA 4 B DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog17 A N6 DA 8 A DA 8 1_555 B N3 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_11_PAIR hydrog18 A N7 DA 8 A DA 8 1_555 B N2 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A N1 DG 9 A DG 9 1_555 B N3 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A N2 DG 9 A DG 9 1_555 B O2 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A O6 DG 9 A DG 9 1_555 B N4 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A N1 DG 10 A DG 10 1_555 B N3 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A N2 DG 10 A DG 10 1_555 B O2 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 A O6 DG 10 A DG 10 1_555 B N4 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1D8X 
_atom_sites.fract_transf_matrix[1][1]    0.015928 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004084 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028023 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.045951 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 22 22 MG MO5 . 
D 2 MG A 1 23 23 MG MO5 . 
E 3 NCO A 1 21 21 NCO NCO . 
F 4 HOH A 1 100 100 HOH HOH . 
F 4 HOH A 2 101 101 HOH HOH . 
F 4 HOH A 3 102 102 HOH HOH . 
F 4 HOH A 4 105 105 HOH HOH . 
F 4 HOH A 5 107 107 HOH HOH . 
F 4 HOH A 6 110 110 HOH HOH . 
F 4 HOH A 7 111 111 HOH HOH . 
F 4 HOH A 8 114 114 HOH HOH . 
F 4 HOH A 9 115 115 HOH HOH . 
F 4 HOH A 10 116 116 HOH HOH . 
F 4 HOH A 11 117 117 HOH HOH . 
F 4 HOH A 12 118 118 HOH HOH . 
F 4 HOH A 13 119 119 HOH HOH . 
F 4 HOH A 14 120 120 HOH HOH . 
F 4 HOH A 15 121 121 HOH HOH . 
F 4 HOH A 16 122 122 HOH HOH . 
F 4 HOH A 17 123 123 HOH HOH . 
F 4 HOH A 18 124 124 HOH HOH . 
F 4 HOH A 19 126 126 HOH HOH . 
F 4 HOH A 20 131 131 HOH HOH . 
F 4 HOH A 21 134 134 HOH HOH . 
F 4 HOH A 22 135 135 HOH HOH . 
F 4 HOH A 23 137 137 HOH HOH . 
F 4 HOH A 24 140 140 HOH HOH . 
F 4 HOH A 25 143 143 HOH HOH . 
F 4 HOH A 26 144 144 HOH HOH . 
F 4 HOH A 27 146 146 HOH HOH . 
F 4 HOH A 28 147 147 HOH HOH . 
F 4 HOH A 29 148 148 HOH HOH . 
F 4 HOH A 30 152 152 HOH HOH . 
F 4 HOH A 31 155 155 HOH HOH . 
F 4 HOH A 32 156 156 HOH HOH . 
F 4 HOH A 33 157 157 HOH HOH . 
F 4 HOH A 34 158 158 HOH HOH . 
F 4 HOH A 35 160 160 HOH HOH . 
F 4 HOH A 36 161 161 HOH HOH . 
F 4 HOH A 37 162 162 HOH HOH . 
F 4 HOH A 38 165 165 HOH HOH . 
F 4 HOH A 39 167 167 HOH HOH . 
F 4 HOH A 40 168 168 HOH HOH . 
F 4 HOH A 41 170 170 HOH HOH . 
F 4 HOH A 42 171 171 HOH HOH . 
F 4 HOH A 43 172 172 HOH HOH . 
F 4 HOH A 44 173 173 HOH HOH . 
F 4 HOH A 45 174 174 HOH HOH . 
F 4 HOH A 46 175 175 HOH HOH . 
F 4 HOH A 47 176 176 HOH HOH . 
F 4 HOH A 48 178 178 HOH HOH . 
F 4 HOH A 49 183 183 HOH HOH . 
F 4 HOH A 50 184 184 HOH HOH . 
F 4 HOH A 51 185 185 HOH HOH . 
F 4 HOH A 52 188 188 HOH HOH . 
F 4 HOH A 53 190 190 HOH HOH . 
F 4 HOH A 54 191 191 HOH HOH . 
F 4 HOH A 55 192 192 HOH HOH . 
F 4 HOH A 56 193 193 HOH HOH . 
F 4 HOH A 57 195 195 HOH HOH . 
F 4 HOH A 58 199 199 HOH HOH . 
F 4 HOH A 59 200 200 HOH HOH . 
F 4 HOH A 60 201 201 HOH HOH . 
F 4 HOH A 61 202 202 HOH HOH . 
F 4 HOH A 62 204 204 HOH HOH . 
F 4 HOH A 63 206 206 HOH HOH . 
F 4 HOH A 64 208 208 HOH HOH . 
F 4 HOH A 65 209 209 HOH HOH . 
F 4 HOH A 66 210 210 HOH HOH . 
F 4 HOH A 67 211 211 HOH HOH . 
F 4 HOH A 68 213 213 HOH HOH . 
F 4 HOH A 69 214 214 HOH HOH . 
F 4 HOH A 70 215 215 HOH HOH . 
F 4 HOH A 71 217 217 HOH HOH . 
F 4 HOH A 72 221 221 HOH HOH . 
F 4 HOH A 73 224 224 HOH HOH . 
F 4 HOH A 74 225 225 HOH HOH . 
F 4 HOH A 75 228 22 HOH MO5 . 
F 4 HOH A 76 229 22 HOH MO5 . 
F 4 HOH A 77 230 22 HOH MO5 . 
F 4 HOH A 78 231 22 HOH MO5 . 
F 4 HOH A 79 232 22 HOH MO5 . 
F 4 HOH A 80 233 23 HOH MO5 . 
F 4 HOH A 81 234 23 HOH MO5 . 
F 4 HOH A 82 235 23 HOH MO5 . 
F 4 HOH A 83 236 23 HOH MO5 . 
F 4 HOH A 84 237 23 HOH MO5 . 
G 4 HOH B 1 103 103 HOH HOH . 
G 4 HOH B 2 104 104 HOH HOH . 
G 4 HOH B 3 106 106 HOH HOH . 
G 4 HOH B 4 108 108 HOH HOH . 
G 4 HOH B 5 109 109 HOH HOH . 
G 4 HOH B 6 112 112 HOH HOH . 
G 4 HOH B 7 113 113 HOH HOH . 
G 4 HOH B 8 125 125 HOH HOH . 
G 4 HOH B 9 127 127 HOH HOH . 
G 4 HOH B 10 128 128 HOH HOH . 
G 4 HOH B 11 129 129 HOH HOH . 
G 4 HOH B 12 130 130 HOH HOH . 
G 4 HOH B 13 132 132 HOH HOH . 
G 4 HOH B 14 133 133 HOH HOH . 
G 4 HOH B 15 136 136 HOH HOH . 
G 4 HOH B 16 138 138 HOH HOH . 
G 4 HOH B 17 139 139 HOH HOH . 
G 4 HOH B 18 141 141 HOH HOH . 
G 4 HOH B 19 142 142 HOH HOH . 
G 4 HOH B 20 145 145 HOH HOH . 
G 4 HOH B 21 149 149 HOH HOH . 
G 4 HOH B 22 150 150 HOH HOH . 
G 4 HOH B 23 151 151 HOH HOH . 
G 4 HOH B 24 153 153 HOH HOH . 
G 4 HOH B 25 154 154 HOH HOH . 
G 4 HOH B 26 159 159 HOH HOH . 
G 4 HOH B 27 163 163 HOH HOH . 
G 4 HOH B 28 164 164 HOH HOH . 
G 4 HOH B 29 166 166 HOH HOH . 
G 4 HOH B 30 169 169 HOH HOH . 
G 4 HOH B 31 177 177 HOH HOH . 
G 4 HOH B 32 179 179 HOH HOH . 
G 4 HOH B 33 180 180 HOH HOH . 
G 4 HOH B 34 181 181 HOH HOH . 
G 4 HOH B 35 182 182 HOH HOH . 
G 4 HOH B 36 186 186 HOH HOH . 
G 4 HOH B 37 187 187 HOH HOH . 
G 4 HOH B 38 189 189 HOH HOH . 
G 4 HOH B 39 194 194 HOH HOH . 
G 4 HOH B 40 196 196 HOH HOH . 
G 4 HOH B 41 197 197 HOH HOH . 
G 4 HOH B 42 198 198 HOH HOH . 
G 4 HOH B 43 203 203 HOH HOH . 
G 4 HOH B 44 205 205 HOH HOH . 
G 4 HOH B 45 207 207 HOH HOH . 
G 4 HOH B 46 212 212 HOH HOH . 
G 4 HOH B 47 216 216 HOH HOH . 
G 4 HOH B 48 218 218 HOH HOH . 
G 4 HOH B 49 219 219 HOH HOH . 
G 4 HOH B 50 220 220 HOH HOH . 
G 4 HOH B 51 222 222 HOH HOH . 
G 4 HOH B 52 223 223 HOH HOH . 
G 4 HOH B 53 226 226 HOH HOH . 
G 4 HOH B 54 227 227 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               2.46 
_atom_site.Cartn_y               8.51 
_atom_site.Cartn_z               -0.11 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.13 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           23 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#