data_1DBQ # _model_server_result.job_id vbPJnuUdIwCS7Ju0flqmJg _model_server_result.datetime_utc '2024-11-26 01:40:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dbq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1DBQ # _exptl.entry_id 1DBQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.17 _cell.angle_gamma 90 _cell.entry_id 1DBQ _cell.length_a 38.04 _cell.length_b 125.26 _cell.length_c 61.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DBQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 2 1_555 F O HOH . A HOH 409 1_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc2 E MG MG . B MG 3 1_555 G O HOH . B HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DBQ _atom_sites.fract_transf_matrix[1][1] 0.026288 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004716 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 1 1 MG MG . D 2 MG A 1 2 2 MG MG . E 2 MG B 1 3 3 MG MG . F 3 HOH A 1 342 4 HOH HOH . F 3 HOH A 2 343 5 HOH HOH . F 3 HOH A 3 344 7 HOH HOH . F 3 HOH A 4 345 10 HOH HOH . F 3 HOH A 5 346 11 HOH HOH . F 3 HOH A 6 347 12 HOH HOH . F 3 HOH A 7 348 13 HOH HOH . F 3 HOH A 8 349 17 HOH HOH . F 3 HOH A 9 350 19 HOH HOH . F 3 HOH A 10 351 25 HOH HOH . F 3 HOH A 11 352 26 HOH HOH . F 3 HOH A 12 353 27 HOH HOH . F 3 HOH A 13 354 28 HOH HOH . F 3 HOH A 14 355 29 HOH HOH . F 3 HOH A 15 356 30 HOH HOH . F 3 HOH A 16 357 31 HOH HOH . F 3 HOH A 17 358 32 HOH HOH . F 3 HOH A 18 359 33 HOH HOH . F 3 HOH A 19 360 34 HOH HOH . F 3 HOH A 20 361 35 HOH HOH . F 3 HOH A 21 362 36 HOH HOH . F 3 HOH A 22 363 37 HOH HOH . F 3 HOH A 23 364 38 HOH HOH . F 3 HOH A 24 365 39 HOH HOH . F 3 HOH A 25 366 41 HOH HOH . F 3 HOH A 26 367 42 HOH HOH . F 3 HOH A 27 368 43 HOH HOH . F 3 HOH A 28 369 44 HOH HOH . F 3 HOH A 29 370 45 HOH HOH . F 3 HOH A 30 371 46 HOH HOH . F 3 HOH A 31 372 47 HOH HOH . F 3 HOH A 32 373 48 HOH HOH . F 3 HOH A 33 374 49 HOH HOH . F 3 HOH A 34 375 50 HOH HOH . F 3 HOH A 35 376 51 HOH HOH . F 3 HOH A 36 377 52 HOH HOH . F 3 HOH A 37 378 53 HOH HOH . F 3 HOH A 38 379 58 HOH HOH . F 3 HOH A 39 380 59 HOH HOH . F 3 HOH A 40 381 60 HOH HOH . F 3 HOH A 41 382 61 HOH HOH . F 3 HOH A 42 383 62 HOH HOH . F 3 HOH A 43 384 63 HOH HOH . F 3 HOH A 44 385 64 HOH HOH . F 3 HOH A 45 386 65 HOH HOH . F 3 HOH A 46 387 67 HOH HOH . F 3 HOH A 47 388 68 HOH HOH . F 3 HOH A 48 389 71 HOH HOH . F 3 HOH A 49 390 72 HOH HOH . F 3 HOH A 50 391 73 HOH HOH . F 3 HOH A 51 392 74 HOH HOH . F 3 HOH A 52 393 75 HOH HOH . F 3 HOH A 53 394 76 HOH HOH . F 3 HOH A 54 395 84 HOH HOH . F 3 HOH A 55 396 85 HOH HOH . F 3 HOH A 56 397 86 HOH HOH . F 3 HOH A 57 398 91 HOH HOH . F 3 HOH A 58 399 92 HOH HOH . F 3 HOH A 59 400 96 HOH HOH . F 3 HOH A 60 401 98 HOH HOH . F 3 HOH A 61 402 99 HOH HOH . F 3 HOH A 62 403 108 HOH HOH . F 3 HOH A 63 404 109 HOH HOH . F 3 HOH A 64 405 110 HOH HOH . F 3 HOH A 65 406 111 HOH HOH . F 3 HOH A 66 407 112 HOH HOH . F 3 HOH A 67 408 113 HOH HOH . F 3 HOH A 68 409 126 HOH HOH . F 3 HOH A 69 410 127 HOH HOH . F 3 HOH A 70 411 128 HOH HOH . F 3 HOH A 71 412 129 HOH HOH . F 3 HOH A 72 413 130 HOH HOH . F 3 HOH A 73 414 134 HOH HOH . F 3 HOH A 74 415 135 HOH HOH . F 3 HOH A 75 416 136 HOH HOH . F 3 HOH A 76 417 137 HOH HOH . F 3 HOH A 77 418 138 HOH HOH . F 3 HOH A 78 419 139 HOH HOH . F 3 HOH A 79 420 140 HOH HOH . F 3 HOH A 80 421 141 HOH HOH . F 3 HOH A 81 422 142 HOH HOH . F 3 HOH A 82 423 143 HOH HOH . F 3 HOH A 83 424 144 HOH HOH . F 3 HOH A 84 425 145 HOH HOH . F 3 HOH A 85 426 147 HOH HOH . F 3 HOH A 86 427 148 HOH HOH . F 3 HOH A 87 428 150 HOH HOH . F 3 HOH A 88 429 151 HOH HOH . F 3 HOH A 89 430 152 HOH HOH . F 3 HOH A 90 431 153 HOH HOH . F 3 HOH A 91 432 154 HOH HOH . F 3 HOH A 92 433 155 HOH HOH . F 3 HOH A 93 434 156 HOH HOH . F 3 HOH A 94 435 157 HOH HOH . F 3 HOH A 95 436 158 HOH HOH . F 3 HOH A 96 437 164 HOH HOH . F 3 HOH A 97 438 165 HOH HOH . F 3 HOH A 98 439 166 HOH HOH . F 3 HOH A 99 440 167 HOH HOH . F 3 HOH A 100 441 168 HOH HOH . F 3 HOH A 101 442 169 HOH HOH . F 3 HOH A 102 443 171 HOH HOH . F 3 HOH A 103 444 172 HOH HOH . F 3 HOH A 104 445 174 HOH HOH . F 3 HOH A 105 446 175 HOH HOH . F 3 HOH A 106 447 176 HOH HOH . F 3 HOH A 107 448 177 HOH HOH . F 3 HOH A 108 449 178 HOH HOH . F 3 HOH A 109 450 179 HOH HOH . F 3 HOH A 110 451 180 HOH HOH . F 3 HOH A 111 452 181 HOH HOH . F 3 HOH A 112 453 182 HOH HOH . F 3 HOH A 113 454 183 HOH HOH . F 3 HOH A 114 455 184 HOH HOH . F 3 HOH A 115 456 186 HOH HOH . F 3 HOH A 116 457 187 HOH HOH . F 3 HOH A 117 458 188 HOH HOH . F 3 HOH A 118 459 189 HOH HOH . F 3 HOH A 119 460 192 HOH HOH . F 3 HOH A 120 461 195 HOH HOH . F 3 HOH A 121 462 204 HOH HOH . F 3 HOH A 122 463 205 HOH HOH . F 3 HOH A 123 464 206 HOH HOH . F 3 HOH A 124 465 208 HOH HOH . F 3 HOH A 125 466 209 HOH HOH . F 3 HOH A 126 467 212 HOH HOH . F 3 HOH A 127 468 213 HOH HOH . F 3 HOH A 128 469 221 HOH HOH . F 3 HOH A 129 470 222 HOH HOH . F 3 HOH A 130 471 223 HOH HOH . F 3 HOH A 131 472 224 HOH HOH . F 3 HOH A 132 473 225 HOH HOH . F 3 HOH A 133 474 226 HOH HOH . F 3 HOH A 134 475 228 HOH HOH . F 3 HOH A 135 476 229 HOH HOH . F 3 HOH A 136 477 230 HOH HOH . F 3 HOH A 137 478 236 HOH HOH . F 3 HOH A 138 479 237 HOH HOH . F 3 HOH A 139 480 238 HOH HOH . F 3 HOH A 140 481 239 HOH HOH . F 3 HOH A 141 482 241 HOH HOH . F 3 HOH A 142 483 247 HOH HOH . G 3 HOH B 1 342 6 HOH HOH . G 3 HOH B 2 343 8 HOH HOH . G 3 HOH B 3 344 9 HOH HOH . G 3 HOH B 4 345 14 HOH HOH . G 3 HOH B 5 346 15 HOH HOH . G 3 HOH B 6 347 16 HOH HOH . G 3 HOH B 7 348 18 HOH HOH . G 3 HOH B 8 349 20 HOH HOH . G 3 HOH B 9 350 21 HOH HOH . G 3 HOH B 10 351 22 HOH HOH . G 3 HOH B 11 352 23 HOH HOH . G 3 HOH B 12 353 24 HOH HOH . G 3 HOH B 13 354 40 HOH HOH . G 3 HOH B 14 355 54 HOH HOH . G 3 HOH B 15 356 55 HOH HOH . G 3 HOH B 16 357 56 HOH HOH . G 3 HOH B 17 358 57 HOH HOH . G 3 HOH B 18 359 66 HOH HOH . G 3 HOH B 19 360 69 HOH HOH . G 3 HOH B 20 361 70 HOH HOH . G 3 HOH B 21 362 77 HOH HOH . G 3 HOH B 22 363 78 HOH HOH . G 3 HOH B 23 364 79 HOH HOH . G 3 HOH B 24 365 80 HOH HOH . G 3 HOH B 25 366 81 HOH HOH . G 3 HOH B 26 367 82 HOH HOH . G 3 HOH B 27 368 83 HOH HOH . G 3 HOH B 28 369 87 HOH HOH . G 3 HOH B 29 370 88 HOH HOH . G 3 HOH B 30 371 89 HOH HOH . G 3 HOH B 31 372 90 HOH HOH . G 3 HOH B 32 373 93 HOH HOH . G 3 HOH B 33 374 94 HOH HOH . G 3 HOH B 34 375 95 HOH HOH . G 3 HOH B 35 376 97 HOH HOH . G 3 HOH B 36 377 100 HOH HOH . G 3 HOH B 37 378 101 HOH HOH . G 3 HOH B 38 379 102 HOH HOH . G 3 HOH B 39 380 103 HOH HOH . G 3 HOH B 40 381 104 HOH HOH . G 3 HOH B 41 382 105 HOH HOH . G 3 HOH B 42 383 106 HOH HOH . G 3 HOH B 43 384 107 HOH HOH . G 3 HOH B 44 385 114 HOH HOH . G 3 HOH B 45 386 115 HOH HOH . G 3 HOH B 46 387 116 HOH HOH . G 3 HOH B 47 388 117 HOH HOH . G 3 HOH B 48 389 118 HOH HOH . G 3 HOH B 49 390 119 HOH HOH . G 3 HOH B 50 391 120 HOH HOH . G 3 HOH B 51 392 121 HOH HOH . G 3 HOH B 52 393 122 HOH HOH . G 3 HOH B 53 394 123 HOH HOH . G 3 HOH B 54 395 124 HOH HOH . G 3 HOH B 55 396 125 HOH HOH . G 3 HOH B 56 397 131 HOH HOH . G 3 HOH B 57 398 132 HOH HOH . G 3 HOH B 58 399 133 HOH HOH . G 3 HOH B 59 400 146 HOH HOH . G 3 HOH B 60 401 149 HOH HOH . G 3 HOH B 61 402 159 HOH HOH . G 3 HOH B 62 403 160 HOH HOH . G 3 HOH B 63 404 161 HOH HOH . G 3 HOH B 64 405 162 HOH HOH . G 3 HOH B 65 406 163 HOH HOH . G 3 HOH B 66 407 170 HOH HOH . G 3 HOH B 67 408 173 HOH HOH . G 3 HOH B 68 409 185 HOH HOH . G 3 HOH B 69 410 190 HOH HOH . G 3 HOH B 70 411 191 HOH HOH . G 3 HOH B 71 412 193 HOH HOH . G 3 HOH B 72 413 194 HOH HOH . G 3 HOH B 73 414 196 HOH HOH . G 3 HOH B 74 415 197 HOH HOH . G 3 HOH B 75 416 198 HOH HOH . G 3 HOH B 76 417 199 HOH HOH . G 3 HOH B 77 418 200 HOH HOH . G 3 HOH B 78 419 201 HOH HOH . G 3 HOH B 79 420 202 HOH HOH . G 3 HOH B 80 421 203 HOH HOH . G 3 HOH B 81 422 207 HOH HOH . G 3 HOH B 82 423 210 HOH HOH . G 3 HOH B 83 424 211 HOH HOH . G 3 HOH B 84 425 214 HOH HOH . G 3 HOH B 85 426 215 HOH HOH . G 3 HOH B 86 427 216 HOH HOH . G 3 HOH B 87 428 217 HOH HOH . G 3 HOH B 88 429 218 HOH HOH . G 3 HOH B 89 430 219 HOH HOH . G 3 HOH B 90 431 220 HOH HOH . G 3 HOH B 91 432 227 HOH HOH . G 3 HOH B 92 433 231 HOH HOH . G 3 HOH B 93 434 232 HOH HOH . G 3 HOH B 94 435 233 HOH HOH . G 3 HOH B 95 436 234 HOH HOH . G 3 HOH B 96 437 235 HOH HOH . G 3 HOH B 97 438 240 HOH HOH . G 3 HOH B 98 439 242 HOH HOH . G 3 HOH B 99 440 243 HOH HOH . G 3 HOH B 100 441 244 HOH HOH . G 3 HOH B 101 442 245 HOH HOH . G 3 HOH B 102 443 246 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.583 _atom_site.Cartn_y -4.507 _atom_site.Cartn_z 53.868 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #