data_1DDE
#
_model_server_result.job_id            L4nC4J9soJeTlYFjblrOQQ 
_model_server_result.datetime_utc      '2024-11-12 23:03:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dde 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    1DDE 
#
_exptl.entry_id    1DDE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              88.906 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'YTTRIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1DDE 
_cell.length_a            38.02 
_cell.length_b            55.89 
_cell.length_c            139.49 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DDE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'Y 2' 
_chem_comp.formula_weight    88.906 
_chem_comp.id                Y1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'YTTRIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1DDE 
_atom_sites.fract_transf_matrix[1][1]    0.026302 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017892 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007169 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 Y1 A 1 1 1 Y1 Y1 . 
C 2 Y1 A 1 2 2 Y1 Y1 . 
D 2 Y1 A 1 3 3 Y1 Y1 . 
E 2 Y1 A 1 4 4 Y1 Y1 . 
F 3 HOH A 1 434 1 HOH HOH . 
F 3 HOH A 2 435 2 HOH HOH . 
F 3 HOH A 3 436 3 HOH HOH . 
F 3 HOH A 4 437 4 HOH HOH . 
F 3 HOH A 5 438 5 HOH HOH . 
F 3 HOH A 6 439 6 HOH HOH . 
F 3 HOH A 7 440 7 HOH HOH . 
F 3 HOH A 8 441 8 HOH HOH . 
F 3 HOH A 9 442 9 HOH HOH . 
F 3 HOH A 10 443 10 HOH HOH . 
F 3 HOH A 11 444 11 HOH HOH . 
F 3 HOH A 12 445 12 HOH HOH . 
F 3 HOH A 13 446 13 HOH HOH . 
F 3 HOH A 14 447 14 HOH HOH . 
F 3 HOH A 15 448 15 HOH HOH . 
F 3 HOH A 16 449 16 HOH HOH . 
F 3 HOH A 17 450 17 HOH HOH . 
F 3 HOH A 18 451 18 HOH HOH . 
F 3 HOH A 19 452 19 HOH HOH . 
F 3 HOH A 20 453 20 HOH HOH . 
F 3 HOH A 21 454 21 HOH HOH . 
F 3 HOH A 22 455 22 HOH HOH . 
F 3 HOH A 23 456 23 HOH HOH . 
F 3 HOH A 24 457 24 HOH HOH . 
F 3 HOH A 25 458 25 HOH HOH . 
F 3 HOH A 26 459 26 HOH HOH . 
F 3 HOH A 27 460 27 HOH HOH . 
F 3 HOH A 28 461 28 HOH HOH . 
F 3 HOH A 29 462 29 HOH HOH . 
F 3 HOH A 30 463 30 HOH HOH . 
F 3 HOH A 31 464 31 HOH HOH . 
F 3 HOH A 32 465 32 HOH HOH . 
F 3 HOH A 33 466 33 HOH HOH . 
F 3 HOH A 34 467 34 HOH HOH . 
F 3 HOH A 35 468 35 HOH HOH . 
F 3 HOH A 36 469 36 HOH HOH . 
F 3 HOH A 37 470 37 HOH HOH . 
F 3 HOH A 38 471 38 HOH HOH . 
F 3 HOH A 39 472 39 HOH HOH . 
F 3 HOH A 40 473 40 HOH HOH . 
F 3 HOH A 41 474 41 HOH HOH . 
F 3 HOH A 42 475 42 HOH HOH . 
F 3 HOH A 43 476 43 HOH HOH . 
F 3 HOH A 44 477 44 HOH HOH . 
F 3 HOH A 45 478 45 HOH HOH . 
F 3 HOH A 46 479 46 HOH HOH . 
F 3 HOH A 47 480 47 HOH HOH . 
F 3 HOH A 48 481 48 HOH HOH . 
F 3 HOH A 49 482 49 HOH HOH . 
F 3 HOH A 50 483 50 HOH HOH . 
F 3 HOH A 51 484 51 HOH HOH . 
F 3 HOH A 52 485 52 HOH HOH . 
F 3 HOH A 53 486 53 HOH HOH . 
F 3 HOH A 54 487 54 HOH HOH . 
F 3 HOH A 55 488 55 HOH HOH . 
F 3 HOH A 56 489 56 HOH HOH . 
F 3 HOH A 57 490 57 HOH HOH . 
F 3 HOH A 58 491 58 HOH HOH . 
F 3 HOH A 59 492 59 HOH HOH . 
F 3 HOH A 60 493 60 HOH HOH . 
F 3 HOH A 61 494 61 HOH HOH . 
F 3 HOH A 62 495 62 HOH HOH . 
F 3 HOH A 63 496 63 HOH HOH . 
F 3 HOH A 64 497 64 HOH HOH . 
F 3 HOH A 65 498 65 HOH HOH . 
F 3 HOH A 66 499 66 HOH HOH . 
F 3 HOH A 67 500 67 HOH HOH . 
F 3 HOH A 68 501 68 HOH HOH . 
F 3 HOH A 69 502 69 HOH HOH . 
F 3 HOH A 70 503 70 HOH HOH . 
F 3 HOH A 71 504 71 HOH HOH . 
F 3 HOH A 72 505 72 HOH HOH . 
F 3 HOH A 73 506 73 HOH HOH . 
F 3 HOH A 74 507 74 HOH HOH . 
F 3 HOH A 75 508 75 HOH HOH . 
F 3 HOH A 76 509 76 HOH HOH . 
F 3 HOH A 77 510 77 HOH HOH . 
F 3 HOH A 78 511 78 HOH HOH . 
F 3 HOH A 79 512 79 HOH HOH . 
F 3 HOH A 80 513 80 HOH HOH . 
F 3 HOH A 81 514 81 HOH HOH . 
F 3 HOH A 82 515 82 HOH HOH . 
F 3 HOH A 83 516 83 HOH HOH . 
F 3 HOH A 84 517 84 HOH HOH . 
F 3 HOH A 85 518 85 HOH HOH . 
F 3 HOH A 86 519 86 HOH HOH . 
F 3 HOH A 87 520 87 HOH HOH . 
F 3 HOH A 88 521 88 HOH HOH . 
F 3 HOH A 89 522 89 HOH HOH . 
F 3 HOH A 90 523 90 HOH HOH . 
F 3 HOH A 91 524 91 HOH HOH . 
F 3 HOH A 92 525 92 HOH HOH . 
F 3 HOH A 93 526 93 HOH HOH . 
F 3 HOH A 94 527 94 HOH HOH . 
F 3 HOH A 95 528 95 HOH HOH . 
F 3 HOH A 96 529 96 HOH HOH . 
F 3 HOH A 97 530 97 HOH HOH . 
F 3 HOH A 98 531 98 HOH HOH . 
F 3 HOH A 99 532 99 HOH HOH . 
F 3 HOH A 100 533 100 HOH HOH . 
F 3 HOH A 101 534 101 HOH HOH . 
F 3 HOH A 102 535 102 HOH HOH . 
F 3 HOH A 103 536 103 HOH HOH . 
F 3 HOH A 104 537 104 HOH HOH . 
F 3 HOH A 105 538 105 HOH HOH . 
F 3 HOH A 106 539 106 HOH HOH . 
F 3 HOH A 107 540 107 HOH HOH . 
F 3 HOH A 108 541 108 HOH HOH . 
F 3 HOH A 109 542 109 HOH HOH . 
F 3 HOH A 110 543 110 HOH HOH . 
F 3 HOH A 111 544 111 HOH HOH . 
F 3 HOH A 112 545 112 HOH HOH . 
F 3 HOH A 113 546 113 HOH HOH . 
F 3 HOH A 114 547 114 HOH HOH . 
F 3 HOH A 115 548 115 HOH HOH . 
F 3 HOH A 116 549 116 HOH HOH . 
F 3 HOH A 117 550 117 HOH HOH . 
F 3 HOH A 118 551 118 HOH HOH . 
F 3 HOH A 119 552 119 HOH HOH . 
F 3 HOH A 120 553 120 HOH HOH . 
F 3 HOH A 121 554 121 HOH HOH . 
F 3 HOH A 122 555 122 HOH HOH . 
F 3 HOH A 123 556 123 HOH HOH . 
F 3 HOH A 124 557 124 HOH HOH . 
F 3 HOH A 125 558 125 HOH HOH . 
F 3 HOH A 126 559 126 HOH HOH . 
F 3 HOH A 127 560 127 HOH HOH . 
F 3 HOH A 128 561 128 HOH HOH . 
F 3 HOH A 129 562 129 HOH HOH . 
F 3 HOH A 130 563 130 HOH HOH . 
F 3 HOH A 131 564 131 HOH HOH . 
F 3 HOH A 132 565 132 HOH HOH . 
F 3 HOH A 133 566 133 HOH HOH . 
F 3 HOH A 134 567 134 HOH HOH . 
F 3 HOH A 135 568 135 HOH HOH . 
F 3 HOH A 136 569 136 HOH HOH . 
F 3 HOH A 137 570 137 HOH HOH . 
F 3 HOH A 138 571 138 HOH HOH . 
F 3 HOH A 139 572 139 HOH HOH . 
F 3 HOH A 140 573 140 HOH HOH . 
F 3 HOH A 141 574 141 HOH HOH . 
F 3 HOH A 142 575 142 HOH HOH . 
F 3 HOH A 143 576 143 HOH HOH . 
F 3 HOH A 144 577 144 HOH HOH . 
F 3 HOH A 145 578 145 HOH HOH . 
F 3 HOH A 146 579 146 HOH HOH . 
F 3 HOH A 147 580 147 HOH HOH . 
F 3 HOH A 148 581 148 HOH HOH . 
F 3 HOH A 149 582 149 HOH HOH . 
F 3 HOH A 150 583 150 HOH HOH . 
F 3 HOH A 151 584 151 HOH HOH . 
F 3 HOH A 152 585 152 HOH HOH . 
F 3 HOH A 153 586 153 HOH HOH . 
F 3 HOH A 154 587 154 HOH HOH . 
F 3 HOH A 155 588 155 HOH HOH . 
F 3 HOH A 156 589 156 HOH HOH . 
F 3 HOH A 157 590 157 HOH HOH . 
F 3 HOH A 158 591 158 HOH HOH . 
F 3 HOH A 159 592 159 HOH HOH . 
F 3 HOH A 160 593 160 HOH HOH . 
F 3 HOH A 161 594 161 HOH HOH . 
F 3 HOH A 162 595 162 HOH HOH . 
F 3 HOH A 163 596 163 HOH HOH . 
F 3 HOH A 164 597 164 HOH HOH . 
F 3 HOH A 165 598 165 HOH HOH . 
F 3 HOH A 166 599 166 HOH HOH . 
F 3 HOH A 167 600 167 HOH HOH . 
F 3 HOH A 168 601 168 HOH HOH . 
F 3 HOH A 169 602 169 HOH HOH . 
F 3 HOH A 170 603 170 HOH HOH . 
F 3 HOH A 171 604 171 HOH HOH . 
F 3 HOH A 172 605 172 HOH HOH . 
F 3 HOH A 173 606 173 HOH HOH . 
F 3 HOH A 174 607 174 HOH HOH . 
F 3 HOH A 175 608 175 HOH HOH . 
F 3 HOH A 176 609 176 HOH HOH . 
F 3 HOH A 177 610 177 HOH HOH . 
F 3 HOH A 178 611 178 HOH HOH . 
F 3 HOH A 179 612 179 HOH HOH . 
F 3 HOH A 180 613 180 HOH HOH . 
F 3 HOH A 181 614 181 HOH HOH . 
F 3 HOH A 182 615 182 HOH HOH . 
F 3 HOH A 183 616 183 HOH HOH . 
F 3 HOH A 184 617 184 HOH HOH . 
F 3 HOH A 185 618 185 HOH HOH . 
F 3 HOH A 186 619 186 HOH HOH . 
F 3 HOH A 187 620 187 HOH HOH . 
F 3 HOH A 188 621 188 HOH HOH . 
F 3 HOH A 189 622 189 HOH HOH . 
F 3 HOH A 190 623 190 HOH HOH . 
F 3 HOH A 191 624 191 HOH HOH . 
F 3 HOH A 192 625 192 HOH HOH . 
F 3 HOH A 193 626 193 HOH HOH . 
F 3 HOH A 194 627 194 HOH HOH . 
F 3 HOH A 195 628 195 HOH HOH . 
F 3 HOH A 196 629 196 HOH HOH . 
F 3 HOH A 197 630 197 HOH HOH . 
F 3 HOH A 198 631 198 HOH HOH . 
F 3 HOH A 199 632 199 HOH HOH . 
F 3 HOH A 200 633 200 HOH HOH . 
F 3 HOH A 201 634 201 HOH HOH . 
F 3 HOH A 202 635 202 HOH HOH . 
F 3 HOH A 203 636 203 HOH HOH . 
F 3 HOH A 204 637 204 HOH HOH . 
F 3 HOH A 205 638 205 HOH HOH . 
F 3 HOH A 206 639 206 HOH HOH . 
F 3 HOH A 207 640 207 HOH HOH . 
F 3 HOH A 208 641 208 HOH HOH . 
F 3 HOH A 209 642 209 HOH HOH . 
F 3 HOH A 210 643 210 HOH HOH . 
F 3 HOH A 211 644 211 HOH HOH . 
F 3 HOH A 212 645 212 HOH HOH . 
F 3 HOH A 213 646 213 HOH HOH . 
F 3 HOH A 214 647 214 HOH HOH . 
F 3 HOH A 215 648 215 HOH HOH . 
F 3 HOH A 216 649 216 HOH HOH . 
F 3 HOH A 217 650 217 HOH HOH . 
F 3 HOH A 218 651 218 HOH HOH . 
F 3 HOH A 219 652 219 HOH HOH . 
F 3 HOH A 220 653 220 HOH HOH . 
F 3 HOH A 221 654 221 HOH HOH . 
F 3 HOH A 222 655 222 HOH HOH . 
F 3 HOH A 223 656 223 HOH HOH . 
F 3 HOH A 224 657 224 HOH HOH . 
F 3 HOH A 225 658 225 HOH HOH . 
F 3 HOH A 226 659 226 HOH HOH . 
F 3 HOH A 227 660 227 HOH HOH . 
F 3 HOH A 228 661 228 HOH HOH . 
F 3 HOH A 229 662 229 HOH HOH . 
F 3 HOH A 230 663 230 HOH HOH . 
F 3 HOH A 231 664 231 HOH HOH . 
F 3 HOH A 232 665 232 HOH HOH . 
F 3 HOH A 233 666 233 HOH HOH . 
F 3 HOH A 234 667 234 HOH HOH . 
F 3 HOH A 235 668 235 HOH HOH . 
F 3 HOH A 236 669 236 HOH HOH . 
F 3 HOH A 237 670 237 HOH HOH . 
F 3 HOH A 238 671 238 HOH HOH . 
F 3 HOH A 239 672 239 HOH HOH . 
F 3 HOH A 240 673 240 HOH HOH . 
F 3 HOH A 241 674 241 HOH HOH . 
F 3 HOH A 242 675 242 HOH HOH . 
F 3 HOH A 243 676 243 HOH HOH . 
F 3 HOH A 244 677 244 HOH HOH . 
F 3 HOH A 245 678 245 HOH HOH . 
F 3 HOH A 246 679 246 HOH HOH . 
F 3 HOH A 247 680 247 HOH HOH . 
F 3 HOH A 248 681 248 HOH HOH . 
F 3 HOH A 249 682 249 HOH HOH . 
F 3 HOH A 250 683 250 HOH HOH . 
F 3 HOH A 251 684 251 HOH HOH . 
F 3 HOH A 252 685 252 HOH HOH . 
F 3 HOH A 253 686 253 HOH HOH . 
F 3 HOH A 254 687 254 HOH HOH . 
F 3 HOH A 255 688 255 HOH HOH . 
F 3 HOH A 256 689 256 HOH HOH . 
F 3 HOH A 257 690 257 HOH HOH . 
F 3 HOH A 258 691 258 HOH HOH . 
F 3 HOH A 259 692 259 HOH HOH . 
F 3 HOH A 260 693 260 HOH HOH . 
F 3 HOH A 261 694 261 HOH HOH . 
F 3 HOH A 262 695 262 HOH HOH . 
F 3 HOH A 263 696 263 HOH HOH . 
F 3 HOH A 264 697 264 HOH HOH . 
F 3 HOH A 265 698 265 HOH HOH . 
F 3 HOH A 266 699 266 HOH HOH . 
F 3 HOH A 267 700 267 HOH HOH . 
F 3 HOH A 268 701 268 HOH HOH . 
F 3 HOH A 269 702 269 HOH HOH . 
F 3 HOH A 270 703 270 HOH HOH . 
F 3 HOH A 271 704 271 HOH HOH . 
F 3 HOH A 272 705 272 HOH HOH . 
F 3 HOH A 273 706 273 HOH HOH . 
F 3 HOH A 274 707 274 HOH HOH . 
F 3 HOH A 275 708 275 HOH HOH . 
F 3 HOH A 276 709 276 HOH HOH . 
F 3 HOH A 277 710 277 HOH HOH . 
F 3 HOH A 278 711 278 HOH HOH . 
F 3 HOH A 279 712 279 HOH HOH . 
F 3 HOH A 280 713 280 HOH HOH . 
F 3 HOH A 281 714 281 HOH HOH . 
F 3 HOH A 282 715 282 HOH HOH . 
F 3 HOH A 283 716 283 HOH HOH . 
F 3 HOH A 284 717 284 HOH HOH . 
F 3 HOH A 285 718 285 HOH HOH . 
F 3 HOH A 286 719 286 HOH HOH . 
F 3 HOH A 287 720 287 HOH HOH . 
F 3 HOH A 288 721 288 HOH HOH . 
F 3 HOH A 289 722 289 HOH HOH . 
F 3 HOH A 290 723 290 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           Y 
_atom_site.label_atom_id         Y 
_atom_site.label_comp_id         Y1 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               35.022 
_atom_site.Cartn_y               22.695 
_atom_site.Cartn_z               55.653 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        21.56 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          Y 
_atom_site.auth_comp_id          Y1 
_atom_site.auth_seq_id           1 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           1 
#