data_1DDS # _model_server_result.job_id koQixebMyvs8JKNkOxEGXg _model_server_result.datetime_utc '2024-10-11 01:23:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dds # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 1DDS # _exptl.entry_id 1DDS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1DDS _cell.length_a 93.181 _cell.length_b 93.185 _cell.length_c 73.886 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DDS _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 18 A ASN 18 2_665 F CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A ND2 ASN 18 A ASN 18 2_665 F CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.295 ? metalc ? metalc3 B O ALA 143 B ALA 143 2_665 F CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DDS _atom_sites.fract_transf_matrix[1][1] 0.010732 _atom_sites.fract_transf_matrix[1][2] 0.006196 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 202 202 CL CL . D 3 MTX A 1 201 201 MTX MTX . E 2 CL B 1 203 203 CL CL . F 4 CA B 1 204 204 CA CA . G 3 MTX B 1 201 201 MTX MTX . H 5 HOH A 1 701 701 HOH HOH . H 5 HOH A 2 702 702 HOH HOH . H 5 HOH A 3 703 703 HOH HOH . H 5 HOH A 4 704 704 HOH HOH . H 5 HOH A 5 705 705 HOH HOH . H 5 HOH A 6 706 706 HOH HOH . H 5 HOH A 7 707 707 HOH HOH . H 5 HOH A 8 708 708 HOH HOH . H 5 HOH A 9 709 709 HOH HOH . H 5 HOH A 10 711 711 HOH HOH . H 5 HOH A 11 712 712 HOH HOH . H 5 HOH A 12 713 713 HOH HOH . H 5 HOH A 13 714 714 HOH HOH . H 5 HOH A 14 715 715 HOH HOH . H 5 HOH A 15 716 716 HOH HOH . H 5 HOH A 16 717 717 HOH HOH . H 5 HOH A 17 718 718 HOH HOH . H 5 HOH A 18 719 719 HOH HOH . H 5 HOH A 19 720 720 HOH HOH . H 5 HOH A 20 721 721 HOH HOH . H 5 HOH A 21 722 722 HOH HOH . H 5 HOH A 22 723 723 HOH HOH . H 5 HOH A 23 724 724 HOH HOH . H 5 HOH A 24 725 725 HOH HOH . H 5 HOH A 25 726 726 HOH HOH . H 5 HOH A 26 727 727 HOH HOH . H 5 HOH A 27 728 728 HOH HOH . H 5 HOH A 28 729 729 HOH HOH . H 5 HOH A 29 730 730 HOH HOH . H 5 HOH A 30 731 731 HOH HOH . H 5 HOH A 31 732 732 HOH HOH . H 5 HOH A 32 764 764 HOH HOH . H 5 HOH A 33 765 765 HOH HOH . H 5 HOH A 34 766 766 HOH HOH . H 5 HOH A 35 769 769 HOH HOH . H 5 HOH A 36 770 770 HOH HOH . H 5 HOH A 37 771 771 HOH HOH . H 5 HOH A 38 772 772 HOH HOH . H 5 HOH A 39 773 773 HOH HOH . H 5 HOH A 40 774 774 HOH HOH . H 5 HOH A 41 775 775 HOH HOH . H 5 HOH A 42 776 776 HOH HOH . H 5 HOH A 43 777 777 HOH HOH . H 5 HOH A 44 778 778 HOH HOH . H 5 HOH A 45 779 779 HOH HOH . H 5 HOH A 46 780 780 HOH HOH . H 5 HOH A 47 781 781 HOH HOH . H 5 HOH A 48 782 782 HOH HOH . H 5 HOH A 49 783 783 HOH HOH . H 5 HOH A 50 784 784 HOH HOH . H 5 HOH A 51 785 785 HOH HOH . H 5 HOH A 52 786 786 HOH HOH . H 5 HOH A 53 807 807 HOH HOH . H 5 HOH A 54 808 808 HOH HOH . H 5 HOH A 55 809 809 HOH HOH . H 5 HOH A 56 810 810 HOH HOH . H 5 HOH A 57 811 811 HOH HOH . H 5 HOH A 58 812 812 HOH HOH . H 5 HOH A 59 813 813 HOH HOH . H 5 HOH A 60 814 814 HOH HOH . H 5 HOH A 61 815 815 HOH HOH . H 5 HOH A 62 816 816 HOH HOH . H 5 HOH A 63 817 817 HOH HOH . H 5 HOH A 64 820 820 HOH HOH . H 5 HOH A 65 821 821 HOH HOH . I 5 HOH B 1 710 710 HOH HOH . I 5 HOH B 2 733 733 HOH HOH . I 5 HOH B 3 734 734 HOH HOH . I 5 HOH B 4 735 735 HOH HOH . I 5 HOH B 5 736 736 HOH HOH . I 5 HOH B 6 737 737 HOH HOH . I 5 HOH B 7 738 738 HOH HOH . I 5 HOH B 8 739 739 HOH HOH . I 5 HOH B 9 740 740 HOH HOH . I 5 HOH B 10 741 741 HOH HOH . I 5 HOH B 11 742 742 HOH HOH . I 5 HOH B 12 743 743 HOH HOH . I 5 HOH B 13 744 744 HOH HOH . I 5 HOH B 14 745 745 HOH HOH . I 5 HOH B 15 746 746 HOH HOH . I 5 HOH B 16 747 747 HOH HOH . I 5 HOH B 17 748 748 HOH HOH . I 5 HOH B 18 749 749 HOH HOH . I 5 HOH B 19 750 750 HOH HOH . I 5 HOH B 20 751 751 HOH HOH . I 5 HOH B 21 752 752 HOH HOH . I 5 HOH B 22 753 753 HOH HOH . I 5 HOH B 23 754 754 HOH HOH . I 5 HOH B 24 755 755 HOH HOH . I 5 HOH B 25 756 756 HOH HOH . I 5 HOH B 26 757 757 HOH HOH . I 5 HOH B 27 758 758 HOH HOH . I 5 HOH B 28 759 759 HOH HOH . I 5 HOH B 29 760 760 HOH HOH . I 5 HOH B 30 761 761 HOH HOH . I 5 HOH B 31 762 762 HOH HOH . I 5 HOH B 32 763 763 HOH HOH . I 5 HOH B 33 767 767 HOH HOH . I 5 HOH B 34 768 768 HOH HOH . I 5 HOH B 35 787 787 HOH HOH . I 5 HOH B 36 788 788 HOH HOH . I 5 HOH B 37 789 789 HOH HOH . I 5 HOH B 38 790 790 HOH HOH . I 5 HOH B 39 791 791 HOH HOH . I 5 HOH B 40 792 792 HOH HOH . I 5 HOH B 41 793 793 HOH HOH . I 5 HOH B 42 794 794 HOH HOH . I 5 HOH B 43 795 795 HOH HOH . I 5 HOH B 44 796 796 HOH HOH . I 5 HOH B 45 797 797 HOH HOH . I 5 HOH B 46 798 798 HOH HOH . I 5 HOH B 47 799 799 HOH HOH . I 5 HOH B 48 800 800 HOH HOH . I 5 HOH B 49 801 801 HOH HOH . I 5 HOH B 50 802 802 HOH HOH . I 5 HOH B 51 803 803 HOH HOH . I 5 HOH B 52 804 804 HOH HOH . I 5 HOH B 53 805 805 HOH HOH . I 5 HOH B 54 806 806 HOH HOH . I 5 HOH B 55 818 818 HOH HOH . I 5 HOH B 56 819 819 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -2.254 _atom_site.Cartn_y 60.77 _atom_site.Cartn_z 58.409 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 204 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #