data_1DE0 # _model_server_result.job_id tTbqI4A2nLJxio5doX3A8w _model_server_result.datetime_utc '2025-09-08 19:31:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1de0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":290}' # _entry.id 1DE0 # _exptl.entry_id 1DE0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.76 _cell.angle_gamma 90 _cell.entry_id 1DE0 _cell.length_a 56.54 _cell.length_b 91.05 _cell.length_c 63.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DE0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 97 A CYS 97 1_555 C FE3 SF4 . A SF4 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc2 A SG CYS 132 A CYS 132 1_555 C FE2 SF4 . A SF4 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc3 C FE1 SF4 . A SF4 290 1_555 B SG CYS 97 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc4 C FE4 SF4 . A SF4 290 1_555 B SG CYS 132 B CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 1DE0 _atom_sites.fract_transf_matrix[1][1] 0.017687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003042 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 290 290 SF4 FS4 . D 3 HOH A 1 291 1 HOH HOH . D 3 HOH A 2 292 2 HOH HOH . D 3 HOH A 3 293 4 HOH HOH . D 3 HOH A 4 294 5 HOH HOH . D 3 HOH A 5 295 7 HOH HOH . D 3 HOH A 6 296 8 HOH HOH . D 3 HOH A 7 297 10 HOH HOH . D 3 HOH A 8 298 11 HOH HOH . D 3 HOH A 9 299 13 HOH HOH . D 3 HOH A 10 300 14 HOH HOH . D 3 HOH A 11 301 15 HOH HOH . D 3 HOH A 12 302 16 HOH HOH . D 3 HOH A 13 303 17 HOH HOH . D 3 HOH A 14 304 18 HOH HOH . D 3 HOH A 15 305 19 HOH HOH . D 3 HOH A 16 306 20 HOH HOH . D 3 HOH A 17 307 21 HOH HOH . D 3 HOH A 18 308 23 HOH HOH . D 3 HOH A 19 309 25 HOH HOH . D 3 HOH A 20 310 26 HOH HOH . D 3 HOH A 21 311 27 HOH HOH . D 3 HOH A 22 312 31 HOH HOH . D 3 HOH A 23 313 32 HOH HOH . D 3 HOH A 24 314 36 HOH HOH . D 3 HOH A 25 315 39 HOH HOH . D 3 HOH A 26 316 40 HOH HOH . D 3 HOH A 27 317 43 HOH HOH . D 3 HOH A 28 318 44 HOH HOH . D 3 HOH A 29 319 45 HOH HOH . D 3 HOH A 30 320 46 HOH HOH . D 3 HOH A 31 321 47 HOH HOH . D 3 HOH A 32 322 49 HOH HOH . D 3 HOH A 33 323 50 HOH HOH . D 3 HOH A 34 324 52 HOH HOH . D 3 HOH A 35 325 57 HOH HOH . D 3 HOH A 36 326 58 HOH HOH . D 3 HOH A 37 327 59 HOH HOH . D 3 HOH A 38 328 60 HOH HOH . D 3 HOH A 39 329 61 HOH HOH . D 3 HOH A 40 330 63 HOH HOH . D 3 HOH A 41 331 65 HOH HOH . D 3 HOH A 42 332 67 HOH HOH . D 3 HOH A 43 333 69 HOH HOH . D 3 HOH A 44 334 71 HOH HOH . D 3 HOH A 45 335 73 HOH HOH . D 3 HOH A 46 336 78 HOH HOH . D 3 HOH A 47 337 79 HOH HOH . D 3 HOH A 48 338 80 HOH HOH . D 3 HOH A 49 339 81 HOH HOH . D 3 HOH A 50 340 82 HOH HOH . D 3 HOH A 51 341 83 HOH HOH . D 3 HOH A 52 342 85 HOH HOH . D 3 HOH A 53 343 86 HOH HOH . D 3 HOH A 54 344 88 HOH HOH . D 3 HOH A 55 345 90 HOH HOH . D 3 HOH A 56 346 95 HOH HOH . D 3 HOH A 57 347 96 HOH HOH . D 3 HOH A 58 348 97 HOH HOH . D 3 HOH A 59 349 98 HOH HOH . D 3 HOH A 60 350 99 HOH HOH . D 3 HOH A 61 351 101 HOH HOH . D 3 HOH A 62 352 102 HOH HOH . D 3 HOH A 63 353 103 HOH HOH . D 3 HOH A 64 354 104 HOH HOH . D 3 HOH A 65 355 105 HOH HOH . D 3 HOH A 66 356 107 HOH HOH . D 3 HOH A 67 357 108 HOH HOH . D 3 HOH A 68 358 110 HOH HOH . D 3 HOH A 69 359 111 HOH HOH . D 3 HOH A 70 360 113 HOH HOH . D 3 HOH A 71 361 114 HOH HOH . D 3 HOH A 72 362 118 HOH HOH . D 3 HOH A 73 363 122 HOH HOH . D 3 HOH A 74 364 125 HOH HOH . D 3 HOH A 75 365 126 HOH HOH . D 3 HOH A 76 366 127 HOH HOH . D 3 HOH A 77 367 128 HOH HOH . D 3 HOH A 78 368 129 HOH HOH . D 3 HOH A 79 369 132 HOH HOH . D 3 HOH A 80 370 134 HOH HOH . D 3 HOH A 81 371 135 HOH HOH . D 3 HOH A 82 372 136 HOH HOH . D 3 HOH A 83 373 139 HOH HOH . D 3 HOH A 84 374 141 HOH HOH . D 3 HOH A 85 375 142 HOH HOH . D 3 HOH A 86 376 147 HOH HOH . D 3 HOH A 87 377 148 HOH HOH . D 3 HOH A 88 378 149 HOH HOH . D 3 HOH A 89 379 151 HOH HOH . D 3 HOH A 90 380 153 HOH HOH . D 3 HOH A 91 381 154 HOH HOH . D 3 HOH A 92 382 157 HOH HOH . D 3 HOH A 93 383 158 HOH HOH . D 3 HOH A 94 384 159 HOH HOH . D 3 HOH A 95 385 160 HOH HOH . D 3 HOH A 96 386 164 HOH HOH . D 3 HOH A 97 387 165 HOH HOH . D 3 HOH A 98 388 169 HOH HOH . D 3 HOH A 99 389 170 HOH HOH . D 3 HOH A 100 390 177 HOH HOH . D 3 HOH A 101 391 178 HOH HOH . D 3 HOH A 102 392 180 HOH HOH . D 3 HOH A 103 393 181 HOH HOH . D 3 HOH A 104 394 185 HOH HOH . D 3 HOH A 105 395 186 HOH HOH . D 3 HOH A 106 396 187 HOH HOH . D 3 HOH A 107 397 188 HOH HOH . D 3 HOH A 108 398 190 HOH HOH . D 3 HOH A 109 399 194 HOH HOH . D 3 HOH A 110 400 196 HOH HOH . D 3 HOH A 111 401 197 HOH HOH . D 3 HOH A 112 402 199 HOH HOH . D 3 HOH A 113 403 201 HOH HOH . D 3 HOH A 114 404 207 HOH HOH . D 3 HOH A 115 405 211 HOH HOH . D 3 HOH A 116 406 212 HOH HOH . D 3 HOH A 117 407 215 HOH HOH . D 3 HOH A 118 408 216 HOH HOH . D 3 HOH A 119 409 218 HOH HOH . D 3 HOH A 120 410 219 HOH HOH . D 3 HOH A 121 411 222 HOH HOH . D 3 HOH A 122 412 224 HOH HOH . E 3 HOH B 1 290 3 HOH HOH . E 3 HOH B 2 291 6 HOH HOH . E 3 HOH B 3 292 9 HOH HOH . E 3 HOH B 4 293 12 HOH HOH . E 3 HOH B 5 294 22 HOH HOH . E 3 HOH B 6 295 24 HOH HOH . E 3 HOH B 7 296 28 HOH HOH . E 3 HOH B 8 297 29 HOH HOH . E 3 HOH B 9 298 30 HOH HOH . E 3 HOH B 10 299 33 HOH HOH . E 3 HOH B 11 300 34 HOH HOH . E 3 HOH B 12 301 35 HOH HOH . E 3 HOH B 13 302 37 HOH HOH . E 3 HOH B 14 303 38 HOH HOH . E 3 HOH B 15 304 41 HOH HOH . E 3 HOH B 16 305 42 HOH HOH . E 3 HOH B 17 306 48 HOH HOH . E 3 HOH B 18 307 51 HOH HOH . E 3 HOH B 19 308 53 HOH HOH . E 3 HOH B 20 309 54 HOH HOH . E 3 HOH B 21 310 55 HOH HOH . E 3 HOH B 22 311 56 HOH HOH . E 3 HOH B 23 312 62 HOH HOH . E 3 HOH B 24 313 64 HOH HOH . E 3 HOH B 25 314 66 HOH HOH . E 3 HOH B 26 315 68 HOH HOH . E 3 HOH B 27 316 70 HOH HOH . E 3 HOH B 28 317 72 HOH HOH . E 3 HOH B 29 318 74 HOH HOH . E 3 HOH B 30 319 75 HOH HOH . E 3 HOH B 31 320 76 HOH HOH . E 3 HOH B 32 321 77 HOH HOH . E 3 HOH B 33 322 84 HOH HOH . E 3 HOH B 34 323 87 HOH HOH . E 3 HOH B 35 324 89 HOH HOH . E 3 HOH B 36 325 91 HOH HOH . E 3 HOH B 37 326 92 HOH HOH . E 3 HOH B 38 327 93 HOH HOH . E 3 HOH B 39 328 94 HOH HOH . E 3 HOH B 40 329 100 HOH HOH . E 3 HOH B 41 330 106 HOH HOH . E 3 HOH B 42 331 109 HOH HOH . E 3 HOH B 43 332 112 HOH HOH . E 3 HOH B 44 333 115 HOH HOH . E 3 HOH B 45 334 116 HOH HOH . E 3 HOH B 46 335 117 HOH HOH . E 3 HOH B 47 336 119 HOH HOH . E 3 HOH B 48 337 120 HOH HOH . E 3 HOH B 49 338 121 HOH HOH . E 3 HOH B 50 339 123 HOH HOH . E 3 HOH B 51 340 124 HOH HOH . E 3 HOH B 52 341 130 HOH HOH . E 3 HOH B 53 342 131 HOH HOH . E 3 HOH B 54 343 133 HOH HOH . E 3 HOH B 55 344 137 HOH HOH . E 3 HOH B 56 345 138 HOH HOH . E 3 HOH B 57 346 140 HOH HOH . E 3 HOH B 58 347 143 HOH HOH . E 3 HOH B 59 348 144 HOH HOH . E 3 HOH B 60 349 145 HOH HOH . E 3 HOH B 61 350 146 HOH HOH . E 3 HOH B 62 351 150 HOH HOH . E 3 HOH B 63 352 152 HOH HOH . E 3 HOH B 64 353 155 HOH HOH . E 3 HOH B 65 354 156 HOH HOH . E 3 HOH B 66 355 161 HOH HOH . E 3 HOH B 67 356 162 HOH HOH . E 3 HOH B 68 357 163 HOH HOH . E 3 HOH B 69 358 166 HOH HOH . E 3 HOH B 70 359 167 HOH HOH . E 3 HOH B 71 360 168 HOH HOH . E 3 HOH B 72 361 171 HOH HOH . E 3 HOH B 73 362 172 HOH HOH . E 3 HOH B 74 363 173 HOH HOH . E 3 HOH B 75 364 174 HOH HOH . E 3 HOH B 76 365 175 HOH HOH . E 3 HOH B 77 366 176 HOH HOH . E 3 HOH B 78 367 179 HOH HOH . E 3 HOH B 79 368 182 HOH HOH . E 3 HOH B 80 369 183 HOH HOH . E 3 HOH B 81 370 184 HOH HOH . E 3 HOH B 82 371 189 HOH HOH . E 3 HOH B 83 372 191 HOH HOH . E 3 HOH B 84 373 192 HOH HOH . E 3 HOH B 85 374 193 HOH HOH . E 3 HOH B 86 375 195 HOH HOH . E 3 HOH B 87 376 198 HOH HOH . E 3 HOH B 88 377 200 HOH HOH . E 3 HOH B 89 378 202 HOH HOH . E 3 HOH B 90 379 203 HOH HOH . E 3 HOH B 91 380 204 HOH HOH . E 3 HOH B 92 381 205 HOH HOH . E 3 HOH B 93 382 206 HOH HOH . E 3 HOH B 94 383 208 HOH HOH . E 3 HOH B 95 384 209 HOH HOH . E 3 HOH B 96 385 210 HOH HOH . E 3 HOH B 97 386 213 HOH HOH . E 3 HOH B 98 387 214 HOH HOH . E 3 HOH B 99 388 217 HOH HOH . E 3 HOH B 100 389 220 HOH HOH . E 3 HOH B 101 390 221 HOH HOH . E 3 HOH B 102 391 223 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . C 2 6.284 13.166 9.818 1 28.61 ? FE1 SF4 290 A 1 HETATM 2 FE FE2 SF4 . . . C 2 5.078 10.956 9.67 1 28.52 ? FE2 SF4 290 A 1 HETATM 3 FE FE3 SF4 . . . C 2 5.507 12.342 7.386 1 27.98 ? FE3 SF4 290 A 1 HETATM 4 FE FE4 SF4 . . . C 2 7.44 11.204 8.62 1 27.38 ? FE4 SF4 290 A 1 HETATM 5 S S1 SF4 . . . C 2 5.798 10.099 7.561 1 22.22 ? S1 SF4 290 A 1 HETATM 6 S S2 SF4 . . . C 2 7.476 13.369 7.788 1 23.87 ? S2 SF4 290 A 1 HETATM 7 S S3 SF4 . . . C 2 6.931 11.329 10.943 1 24.08 ? S3 SF4 290 A 1 HETATM 8 S S4 SF4 . . . C 2 4.185 12.893 9.194 1 23.61 ? S4 SF4 290 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #