data_1DF1
#
_model_server_result.job_id            eHDFiYv4LrXu2PaDaQoiLw 
_model_server_result.datetime_utc      '2024-11-07 15:33:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1df1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":900}' 
#
_entry.id    1DF1 
#
_exptl.entry_id    1DF1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1DF1 
_cell.length_a            214.464 
_cell.length_b            214.464 
_cell.length_c            112.752 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DF1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA,PQS dimeric 2 author_and_software_defined_assembly 1 
PISA,PQS dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1,2 
B,G,H,I,J,L 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 214.464 0 56.376 
3 'crystal symmetry operation' 9_766 -x+2,-x+y+1,-z+5/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 321.696 185.731272 187.92 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 28 A CYS 104 1_555 C ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc2 A SG CYS 28 A CYS 104 11_655 C ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc3 A SG CYS 33 A CYS 109 1_555 C ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc4 A SG CYS 33 A CYS 109 11_655 C ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc5 A SG CYS 118 A CYS 194 1_555 D FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc6 B SG CYS 28 B CYS 104 1_555 G ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc7 B SG CYS 28 B CYS 104 9_766 G ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc8 B SG CYS 33 B CYS 109 1_555 G ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc9 B SG CYS 33 B CYS 109 9_766 G ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc10 B SG CYS 118 B CYS 194 1_555 H FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1DF1 
_atom_sites.fract_transf_matrix[1][1]    0.004663 
_atom_sites.fract_transf_matrix[1][2]    0.002692 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005384 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008869 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 900 900 ZN ZN . 
D 3 HEM A 1 901 901 HEM HEM . 
E 4 H4B A 1 902 902 H4B HBI . 
F 5 ITU A 1 899 899 ITU ITU . 
G 2 ZN B 1 900 900 ZN ZN . 
H 3 HEM B 1 901 901 HEM HEM . 
I 4 H4B B 1 1902 902 H4B HBI . 
J 5 ITU B 1 1899 899 ITU ITU . 
K 6 HOH A 1 903 903 HOH H2O . 
K 6 HOH A 2 905 905 HOH H2O . 
K 6 HOH A 3 906 906 HOH H2O . 
K 6 HOH A 4 907 907 HOH H2O . 
K 6 HOH A 5 908 908 HOH H2O . 
K 6 HOH A 6 909 909 HOH H2O . 
K 6 HOH A 7 910 910 HOH H2O . 
K 6 HOH A 8 911 911 HOH H2O . 
K 6 HOH A 9 912 912 HOH H2O . 
K 6 HOH A 10 913 913 HOH H2O . 
K 6 HOH A 11 914 914 HOH H2O . 
K 6 HOH A 12 915 915 HOH H2O . 
K 6 HOH A 13 916 916 HOH H2O . 
K 6 HOH A 14 917 917 HOH H2O . 
K 6 HOH A 15 918 918 HOH H2O . 
K 6 HOH A 16 919 919 HOH H2O . 
K 6 HOH A 17 920 920 HOH H2O . 
K 6 HOH A 18 921 921 HOH H2O . 
K 6 HOH A 19 922 922 HOH H2O . 
K 6 HOH A 20 923 923 HOH H2O . 
K 6 HOH A 21 924 924 HOH H2O . 
K 6 HOH A 22 925 925 HOH H2O . 
K 6 HOH A 23 926 926 HOH H2O . 
K 6 HOH A 24 927 927 HOH H2O . 
K 6 HOH A 25 928 928 HOH H2O . 
K 6 HOH A 26 929 929 HOH H2O . 
K 6 HOH A 27 930 930 HOH H2O . 
K 6 HOH A 28 974 974 HOH H2O . 
K 6 HOH A 29 975 975 HOH H2O . 
K 6 HOH A 30 976 976 HOH H2O . 
K 6 HOH A 31 977 977 HOH H2O . 
K 6 HOH A 32 978 978 HOH H2O . 
K 6 HOH A 33 980 980 HOH H2O . 
K 6 HOH A 34 981 981 HOH H2O . 
K 6 HOH A 35 982 982 HOH H2O . 
K 6 HOH A 36 983 983 HOH H2O . 
K 6 HOH A 37 984 984 HOH H2O . 
K 6 HOH A 38 985 985 HOH H2O . 
K 6 HOH A 39 986 986 HOH H2O . 
K 6 HOH A 40 987 987 HOH H2O . 
K 6 HOH A 41 988 988 HOH H2O . 
K 6 HOH A 42 989 989 HOH H2O . 
K 6 HOH A 43 990 990 HOH H2O . 
K 6 HOH A 44 991 991 HOH H2O . 
K 6 HOH A 45 992 992 HOH H2O . 
K 6 HOH A 46 993 993 HOH H2O . 
K 6 HOH A 47 994 994 HOH H2O . 
K 6 HOH A 48 995 995 HOH H2O . 
K 6 HOH A 49 996 996 HOH H2O . 
K 6 HOH A 50 1011 1011 HOH H2O . 
K 6 HOH A 51 1012 1012 HOH H2O . 
K 6 HOH A 52 1013 1013 HOH H2O . 
K 6 HOH A 53 1014 1014 HOH H2O . 
K 6 HOH A 54 1026 1026 HOH H2O . 
K 6 HOH A 55 1027 1027 HOH H2O . 
K 6 HOH A 56 1028 1028 HOH H2O . 
K 6 HOH A 57 1029 1029 HOH H2O . 
K 6 HOH A 58 1030 1030 HOH H2O . 
K 6 HOH A 59 1031 1031 HOH H2O . 
K 6 HOH A 60 1033 1033 HOH H2O . 
K 6 HOH A 61 1034 1034 HOH H2O . 
K 6 HOH A 62 1035 1035 HOH H2O . 
K 6 HOH A 63 1036 1036 HOH H2O . 
K 6 HOH A 64 1037 1037 HOH H2O . 
K 6 HOH A 65 1038 1038 HOH H2O . 
K 6 HOH A 66 1040 1040 HOH H2O . 
K 6 HOH A 67 1042 1042 HOH H2O . 
K 6 HOH A 68 1043 1043 HOH H2O . 
K 6 HOH A 69 1044 1044 HOH H2O . 
K 6 HOH A 70 1045 1045 HOH H2O . 
K 6 HOH A 71 1046 1046 HOH H2O . 
K 6 HOH A 72 1047 1047 HOH H2O . 
K 6 HOH A 73 1048 1048 HOH H2O . 
K 6 HOH A 74 1056 1056 HOH H2O . 
K 6 HOH A 75 1057 1057 HOH H2O . 
K 6 HOH A 76 1058 1058 HOH H2O . 
K 6 HOH A 77 1059 1059 HOH H2O . 
K 6 HOH A 78 1060 1060 HOH H2O . 
K 6 HOH A 79 1061 1061 HOH H2O . 
K 6 HOH A 80 1062 1062 HOH H2O . 
K 6 HOH A 81 1063 1063 HOH H2O . 
K 6 HOH A 82 1064 1064 HOH H2O . 
K 6 HOH A 83 1065 1065 HOH H2O . 
K 6 HOH A 84 1066 1066 HOH H2O . 
K 6 HOH A 85 1067 1067 HOH H2O . 
K 6 HOH A 86 1068 1068 HOH H2O . 
K 6 HOH A 87 1069 1069 HOH H2O . 
K 6 HOH A 88 1070 1070 HOH H2O . 
K 6 HOH A 89 1071 1071 HOH H2O . 
K 6 HOH A 90 1072 1072 HOH H2O . 
K 6 HOH A 91 1073 1073 HOH H2O . 
K 6 HOH A 92 1074 1074 HOH H2O . 
K 6 HOH A 93 1075 1075 HOH H2O . 
K 6 HOH A 94 1076 1076 HOH H2O . 
K 6 HOH A 95 1077 1077 HOH H2O . 
K 6 HOH A 96 1078 1078 HOH H2O . 
K 6 HOH A 97 1094 1094 HOH H2O . 
K 6 HOH A 98 1095 1095 HOH H2O . 
K 6 HOH A 99 1097 1097 HOH H2O . 
K 6 HOH A 100 1098 1098 HOH H2O . 
K 6 HOH A 101 1099 1099 HOH H2O . 
K 6 HOH A 102 1100 1100 HOH H2O . 
K 6 HOH A 103 1101 1101 HOH H2O . 
K 6 HOH A 104 1102 1102 HOH H2O . 
K 6 HOH A 105 1121 1121 HOH H2O . 
K 6 HOH A 106 1131 1131 HOH H2O . 
K 6 HOH A 107 1132 1132 HOH H2O . 
L 6 HOH B 1 931 931 HOH H2O . 
L 6 HOH B 2 932 932 HOH H2O . 
L 6 HOH B 3 933 933 HOH H2O . 
L 6 HOH B 4 934 934 HOH H2O . 
L 6 HOH B 5 935 935 HOH H2O . 
L 6 HOH B 6 936 936 HOH H2O . 
L 6 HOH B 7 937 937 HOH H2O . 
L 6 HOH B 8 938 938 HOH H2O . 
L 6 HOH B 9 939 939 HOH H2O . 
L 6 HOH B 10 940 940 HOH H2O . 
L 6 HOH B 11 941 941 HOH H2O . 
L 6 HOH B 12 942 942 HOH H2O . 
L 6 HOH B 13 943 943 HOH H2O . 
L 6 HOH B 14 945 945 HOH H2O . 
L 6 HOH B 15 946 946 HOH H2O . 
L 6 HOH B 16 947 947 HOH H2O . 
L 6 HOH B 17 948 948 HOH H2O . 
L 6 HOH B 18 949 949 HOH H2O . 
L 6 HOH B 19 950 950 HOH H2O . 
L 6 HOH B 20 951 951 HOH H2O . 
L 6 HOH B 21 952 952 HOH H2O . 
L 6 HOH B 22 953 953 HOH H2O . 
L 6 HOH B 23 954 954 HOH H2O . 
L 6 HOH B 24 955 955 HOH H2O . 
L 6 HOH B 25 956 956 HOH H2O . 
L 6 HOH B 26 957 957 HOH H2O . 
L 6 HOH B 27 958 958 HOH H2O . 
L 6 HOH B 28 959 959 HOH H2O . 
L 6 HOH B 29 960 960 HOH H2O . 
L 6 HOH B 30 961 961 HOH H2O . 
L 6 HOH B 31 962 962 HOH H2O . 
L 6 HOH B 32 963 963 HOH H2O . 
L 6 HOH B 33 964 964 HOH H2O . 
L 6 HOH B 34 965 965 HOH H2O . 
L 6 HOH B 35 967 967 HOH H2O . 
L 6 HOH B 36 968 968 HOH H2O . 
L 6 HOH B 37 969 969 HOH H2O . 
L 6 HOH B 38 970 970 HOH H2O . 
L 6 HOH B 39 971 971 HOH H2O . 
L 6 HOH B 40 972 972 HOH H2O . 
L 6 HOH B 41 997 997 HOH H2O . 
L 6 HOH B 42 998 998 HOH H2O . 
L 6 HOH B 43 999 999 HOH H2O . 
L 6 HOH B 44 1000 1000 HOH H2O . 
L 6 HOH B 45 1001 1001 HOH H2O . 
L 6 HOH B 46 1002 1002 HOH H2O . 
L 6 HOH B 47 1004 1004 HOH H2O . 
L 6 HOH B 48 1006 1006 HOH H2O . 
L 6 HOH B 49 1007 1007 HOH H2O . 
L 6 HOH B 50 1008 1008 HOH H2O . 
L 6 HOH B 51 1009 1009 HOH H2O . 
L 6 HOH B 52 1010 1010 HOH H2O . 
L 6 HOH B 53 1015 1015 HOH H2O . 
L 6 HOH B 54 1016 1016 HOH H2O . 
L 6 HOH B 55 1017 1017 HOH H2O . 
L 6 HOH B 56 1018 1018 HOH H2O . 
L 6 HOH B 57 1019 1019 HOH H2O . 
L 6 HOH B 58 1020 1020 HOH H2O . 
L 6 HOH B 59 1021 1021 HOH H2O . 
L 6 HOH B 60 1022 1022 HOH H2O . 
L 6 HOH B 61 1023 1023 HOH H2O . 
L 6 HOH B 62 1024 1024 HOH H2O . 
L 6 HOH B 63 1025 1025 HOH H2O . 
L 6 HOH B 64 1050 1050 HOH H2O . 
L 6 HOH B 65 1051 1051 HOH H2O . 
L 6 HOH B 66 1052 1052 HOH H2O . 
L 6 HOH B 67 1053 1053 HOH H2O . 
L 6 HOH B 68 1055 1055 HOH H2O . 
L 6 HOH B 69 1079 1079 HOH H2O . 
L 6 HOH B 70 1080 1080 HOH H2O . 
L 6 HOH B 71 1081 1081 HOH H2O . 
L 6 HOH B 72 1083 1083 HOH H2O . 
L 6 HOH B 73 1084 1084 HOH H2O . 
L 6 HOH B 74 1090 1090 HOH H2O . 
L 6 HOH B 75 1091 1091 HOH H2O . 
L 6 HOH B 76 1092 1092 HOH H2O . 
L 6 HOH B 77 1093 1093 HOH H2O . 
L 6 HOH B 78 1103 1103 HOH H2O . 
L 6 HOH B 79 1104 1104 HOH H2O . 
L 6 HOH B 80 1105 1105 HOH H2O . 
L 6 HOH B 81 1106 1106 HOH H2O . 
L 6 HOH B 82 1107 1107 HOH H2O . 
L 6 HOH B 83 1108 1108 HOH H2O . 
L 6 HOH B 84 1109 1109 HOH H2O . 
L 6 HOH B 85 1110 1110 HOH H2O . 
L 6 HOH B 86 1111 1111 HOH H2O . 
L 6 HOH B 87 1112 1112 HOH H2O . 
L 6 HOH B 88 1113 1113 HOH H2O . 
L 6 HOH B 89 1114 1114 HOH H2O . 
L 6 HOH B 90 1115 1115 HOH H2O . 
L 6 HOH B 91 1116 1116 HOH H2O . 
L 6 HOH B 92 1117 1117 HOH H2O . 
L 6 HOH B 93 1118 1118 HOH H2O . 
L 6 HOH B 94 1119 1119 HOH H2O . 
L 6 HOH B 95 1120 1120 HOH H2O . 
L 6 HOH B 96 1122 1122 HOH H2O . 
L 6 HOH B 97 1123 1123 HOH H2O . 
L 6 HOH B 98 1124 1124 HOH H2O . 
L 6 HOH B 99 1125 1125 HOH H2O . 
L 6 HOH B 100 1126 1126 HOH H2O . 
L 6 HOH B 101 1127 1127 HOH H2O . 
L 6 HOH B 102 1128 1128 HOH H2O . 
L 6 HOH B 103 1129 1129 HOH H2O . 
L 6 HOH B 104 1130 1130 HOH H2O . 
L 6 HOH B 105 1133 1133 HOH H2O . 
L 6 HOH B 106 1134 1134 HOH H2O . 
L 6 HOH B 107 1135 1135 HOH H2O . 
L 6 HOH B 108 1136 1136 HOH H2O . 
L 6 HOH B 109 1137 1137 HOH H2O . 
L 6 HOH B 110 1138 1138 HOH H2O . 
L 6 HOH B 111 1139 1139 HOH H2O . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               107.319 
_atom_site.Cartn_y               98.736 
_atom_site.Cartn_z               28.134 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        78.99 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           900 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           1 
#