data_1DFJ # _model_server_result.job_id 2yY1yx4k23KX_eecMBEHKw _model_server_result.datetime_utc '2024-12-08 12:13:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dfj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 1DFJ # _exptl.entry_id 1DFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DFJ _cell.length_a 133.3 _cell.length_b 133.3 _cell.length_c 86.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 E CYS 26 1_555 A SG CYS 84 E CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 40 E CYS 40 1_555 A SG CYS 95 E CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 58 E CYS 58 1_555 A SG CYS 110 E CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 A SG CYS 65 E CYS 65 1_555 A SG CYS 72 E CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 B C ACE 1 I ACE 1 1_555 B N MET 2 I MET 1 1_555 A ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 296 n n S O2 SO4 doub 297 n n S O3 SO4 sing 298 n n S O4 SO4 sing 299 n n # _atom_sites.entry_id 1DFJ _atom_sites.fract_transf_matrix[1][1] 0.007502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007502 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 E 1 1001 1001 SO4 SO4 . D 4 HOH E 1 2001 2001 HOH HOH . D 4 HOH E 2 2002 2002 HOH HOH . D 4 HOH E 3 2005 2005 HOH HOH . D 4 HOH E 4 2018 2018 HOH HOH . D 4 HOH E 5 2024 2024 HOH HOH . D 4 HOH E 6 2026 2026 HOH HOH . D 4 HOH E 7 2027 2027 HOH HOH . D 4 HOH E 8 2028 2028 HOH HOH . D 4 HOH E 9 2040 2040 HOH HOH . D 4 HOH E 10 2041 2041 HOH HOH . D 4 HOH E 11 2042 2042 HOH HOH . D 4 HOH E 12 2046 2046 HOH HOH . E 4 HOH I 1 2003 2003 HOH HOH . E 4 HOH I 2 2004 2004 HOH HOH . E 4 HOH I 3 2006 2006 HOH HOH . E 4 HOH I 4 2007 2007 HOH HOH . E 4 HOH I 5 2008 2008 HOH HOH . E 4 HOH I 6 2009 2009 HOH HOH . E 4 HOH I 7 2010 2010 HOH HOH . E 4 HOH I 8 2011 2011 HOH HOH . E 4 HOH I 9 2012 2012 HOH HOH . E 4 HOH I 10 2013 2013 HOH HOH . E 4 HOH I 11 2014 2014 HOH HOH . E 4 HOH I 12 2015 2015 HOH HOH . E 4 HOH I 13 2016 2016 HOH HOH . E 4 HOH I 14 2017 2017 HOH HOH . E 4 HOH I 15 2019 2019 HOH HOH . E 4 HOH I 16 2020 2020 HOH HOH . E 4 HOH I 17 2021 2021 HOH HOH . E 4 HOH I 18 2022 2022 HOH HOH . E 4 HOH I 19 2023 2023 HOH HOH . E 4 HOH I 20 2025 2025 HOH HOH . E 4 HOH I 21 2029 2029 HOH HOH . E 4 HOH I 22 2030 2030 HOH HOH . E 4 HOH I 23 2031 2031 HOH HOH . E 4 HOH I 24 2032 2032 HOH HOH . E 4 HOH I 25 2033 2033 HOH HOH . E 4 HOH I 26 2034 2034 HOH HOH . E 4 HOH I 27 2035 2035 HOH HOH . E 4 HOH I 28 2036 2036 HOH HOH . E 4 HOH I 29 2037 2037 HOH HOH . E 4 HOH I 30 2038 2038 HOH HOH . E 4 HOH I 31 2039 2039 HOH HOH . E 4 HOH I 32 2043 2043 HOH HOH . E 4 HOH I 33 2044 2044 HOH HOH . E 4 HOH I 34 2045 2045 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 4.753 29.145 1.166 1 73.27 ? S SO4 1001 E 1 HETATM 2 O O1 SO4 . . . C 3 4.527 27.727 1.263 1 50.94 ? O1 SO4 1001 E 1 HETATM 3 O O2 SO4 . . . C 3 6.077 29.495 1.567 1 78.56 ? O2 SO4 1001 E 1 HETATM 4 O O3 SO4 . . . C 3 3.833 29.77 2.036 1 60.7 ? O3 SO4 1001 E 1 HETATM 5 O O4 SO4 . . . C 3 4.535 29.645 -0.155 1 69.86 ? O4 SO4 1001 E 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #