data_1DFL # _model_server_result.job_id lG-mOVOSQ8lORAy86CpsrA _model_server_result.datetime_utc '2024-10-18 14:36:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":2996}' # _entry.id 1DFL # _exptl.entry_id 1DFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.2 _cell.angle_gamma 90 _cell.entry_id 1DFL _cell.length_a 53.032 _cell.length_b 243.475 _cell.length_c 124.65 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K 1 1 D,E,F,L,M,N,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 L N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G MG MG . A MG 1997 1_555 H O1 VO4 . A VO4 1998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc2 G MG MG . A MG 1997 1_555 I O1B ADP . A ADP 1999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 H V VO4 . A VO4 1998 1_555 I O3B ADP . A ADP 1999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc4 B O PHE 23 Y PHE 34 1_555 J MG MG . Y MG 1996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc5 C O ASP 17 Z ASP 19 1_555 K CA CA . Z CA 1995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc6 C O ASP 20 Z ASP 22 1_555 K CA CA . Z CA 1995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.378 ? metalc ? metalc7 C O GLY 21 Z GLY 23 1_555 K CA CA . Z CA 1995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc8 C O ALA 25 Z ALA 27 1_555 K CA CA . Z CA 1995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc9 L MG MG . B MG 2997 1_555 M O1 VO4 . B VO4 2998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? metalc ? metalc10 L MG MG . B MG 2997 1_555 N O1B ADP . B ADP 2999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc11 M V VO4 . B VO4 2998 1_555 N O3B ADP . B ADP 2999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc12 E O PHE 23 W PHE 34 1_555 O MG MG . W MG 2996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc13 F O ASP 17 X ASP 19 1_555 P CA CA . X CA 2995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc14 F O ASP 20 X ASP 22 1_555 P CA CA . X CA 2995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.38 ? metalc ? metalc15 F O GLY 21 X GLY 23 1_555 P CA CA . X CA 2995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc16 F O ALA 25 X ALA 27 1_555 P CA CA . X CA 2995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DFL _atom_sites.fract_transf_matrix[1][1] 0.018857 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003392 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004107 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 MG A 1 1997 1997 MG MG . H 5 VO4 A 1 1998 1998 VO4 VO4 . I 6 ADP A 1 1999 1999 ADP ADP . J 4 MG Y 1 1996 1996 MG MG . K 7 CA Z 1 1995 1995 CA CA . L 4 MG B 1 2997 2997 MG MG . M 5 VO4 B 1 2998 2998 VO4 VO4 . N 6 ADP B 1 2999 2999 ADP ADP . O 4 MG W 1 2996 2996 MG MG . P 7 CA X 1 2995 2995 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 4 _atom_site.Cartn_x -49.19 _atom_site.Cartn_y -76.061 _atom_site.Cartn_z 161.802 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2996 _atom_site.auth_asym_id W _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #