data_1DG6 # _model_server_result.job_id GskEfPbNQ6vaKICKBleVsQ _model_server_result.datetime_utc '2024-11-22 06:08:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dg6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1DG6 # _exptl.entry_id 1DG6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1DG6 _cell.length_a 66.435 _cell.length_b 66.435 _cell.length_c 197.727 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 140 A CYS 230 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc2 A SG CYS 140 A CYS 230 3_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc3 A SG CYS 140 A CYS 230 2_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc4 B ZN ZN . A ZN 300 1_555 C CL CL . A CL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 B ZN ZN . A ZN 300 1_555 C CL CL . A CL 406 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 B ZN ZN . A ZN 300 1_555 C CL CL . A CL 406 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DG6 _atom_sites.fract_transf_matrix[1][1] 0.015052 _atom_sites.fract_transf_matrix[1][2] 0.00869 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017381 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN . C 3 CL A 1 406 406 CL CL . D 4 HOH A 1 407 1 HOH HOH . D 4 HOH A 2 408 2 HOH HOH . D 4 HOH A 3 409 3 HOH HOH . D 4 HOH A 4 410 4 HOH HOH . D 4 HOH A 5 411 5 HOH HOH . D 4 HOH A 6 412 6 HOH HOH . D 4 HOH A 7 413 7 HOH HOH . D 4 HOH A 8 414 8 HOH HOH . D 4 HOH A 9 415 9 HOH HOH . D 4 HOH A 10 416 10 HOH HOH . D 4 HOH A 11 417 11 HOH HOH . D 4 HOH A 12 418 12 HOH HOH . D 4 HOH A 13 419 13 HOH HOH . D 4 HOH A 14 420 14 HOH HOH . D 4 HOH A 15 421 15 HOH HOH . D 4 HOH A 16 422 16 HOH HOH . D 4 HOH A 17 423 17 HOH HOH . D 4 HOH A 18 424 18 HOH HOH . D 4 HOH A 19 425 19 HOH HOH . D 4 HOH A 20 426 20 HOH HOH . D 4 HOH A 21 427 21 HOH HOH . D 4 HOH A 22 428 22 HOH HOH . D 4 HOH A 23 429 23 HOH HOH . D 4 HOH A 24 430 24 HOH HOH . D 4 HOH A 25 431 25 HOH HOH . D 4 HOH A 26 432 26 HOH HOH . D 4 HOH A 27 433 27 HOH HOH . D 4 HOH A 28 434 28 HOH HOH . D 4 HOH A 29 435 29 HOH HOH . D 4 HOH A 30 436 30 HOH HOH . D 4 HOH A 31 437 31 HOH HOH . D 4 HOH A 32 438 32 HOH HOH . D 4 HOH A 33 439 33 HOH HOH . D 4 HOH A 34 440 34 HOH HOH . D 4 HOH A 35 441 35 HOH HOH . D 4 HOH A 36 442 36 HOH HOH . D 4 HOH A 37 443 37 HOH HOH . D 4 HOH A 38 444 38 HOH HOH . D 4 HOH A 39 445 39 HOH HOH . D 4 HOH A 40 446 40 HOH HOH . D 4 HOH A 41 447 41 HOH HOH . D 4 HOH A 42 448 42 HOH HOH . D 4 HOH A 43 449 43 HOH HOH . D 4 HOH A 44 450 44 HOH HOH . D 4 HOH A 45 451 45 HOH HOH . D 4 HOH A 46 452 46 HOH HOH . D 4 HOH A 47 453 47 HOH HOH . D 4 HOH A 48 454 48 HOH HOH . D 4 HOH A 49 455 49 HOH HOH . D 4 HOH A 50 456 50 HOH HOH . D 4 HOH A 51 457 51 HOH HOH . D 4 HOH A 52 458 52 HOH HOH . D 4 HOH A 53 459 53 HOH HOH . D 4 HOH A 54 460 54 HOH HOH . D 4 HOH A 55 461 55 HOH HOH . D 4 HOH A 56 462 56 HOH HOH . D 4 HOH A 57 463 57 HOH HOH . D 4 HOH A 58 464 58 HOH HOH . D 4 HOH A 59 465 59 HOH HOH . D 4 HOH A 60 466 60 HOH HOH . D 4 HOH A 61 467 61 HOH HOH . D 4 HOH A 62 468 62 HOH HOH . D 4 HOH A 63 469 63 HOH HOH . D 4 HOH A 64 470 64 HOH HOH . D 4 HOH A 65 471 65 HOH HOH . D 4 HOH A 66 472 66 HOH HOH . D 4 HOH A 67 473 67 HOH HOH . D 4 HOH A 68 474 68 HOH HOH . D 4 HOH A 69 475 69 HOH HOH . D 4 HOH A 70 476 70 HOH HOH . D 4 HOH A 71 477 71 HOH HOH . D 4 HOH A 72 478 72 HOH HOH . D 4 HOH A 73 479 73 HOH HOH . D 4 HOH A 74 480 74 HOH HOH . D 4 HOH A 75 481 75 HOH HOH . D 4 HOH A 76 482 76 HOH HOH . D 4 HOH A 77 483 77 HOH HOH . D 4 HOH A 78 484 78 HOH HOH . D 4 HOH A 79 485 79 HOH HOH . D 4 HOH A 80 486 80 HOH HOH . D 4 HOH A 81 487 81 HOH HOH . D 4 HOH A 82 488 82 HOH HOH . D 4 HOH A 83 489 83 HOH HOH . D 4 HOH A 84 490 84 HOH HOH . D 4 HOH A 85 491 85 HOH HOH . D 4 HOH A 86 492 86 HOH HOH . D 4 HOH A 87 493 87 HOH HOH . D 4 HOH A 88 494 88 HOH HOH . D 4 HOH A 89 495 89 HOH HOH . D 4 HOH A 90 496 90 HOH HOH . D 4 HOH A 91 497 91 HOH HOH . D 4 HOH A 92 498 92 HOH HOH . D 4 HOH A 93 499 93 HOH HOH . D 4 HOH A 94 500 94 HOH HOH . D 4 HOH A 95 501 95 HOH HOH . D 4 HOH A 96 502 96 HOH HOH . D 4 HOH A 97 503 97 HOH HOH . D 4 HOH A 98 504 98 HOH HOH . D 4 HOH A 99 505 99 HOH HOH . D 4 HOH A 100 506 100 HOH HOH . D 4 HOH A 101 507 101 HOH HOH . D 4 HOH A 102 508 102 HOH HOH . D 4 HOH A 103 509 103 HOH HOH . D 4 HOH A 104 510 104 HOH HOH . D 4 HOH A 105 511 105 HOH HOH . D 4 HOH A 106 512 106 HOH HOH . D 4 HOH A 107 513 107 HOH HOH . D 4 HOH A 108 514 108 HOH HOH . D 4 HOH A 109 515 109 HOH HOH . D 4 HOH A 110 516 110 HOH HOH . D 4 HOH A 111 517 111 HOH HOH . D 4 HOH A 112 518 112 HOH HOH . D 4 HOH A 113 519 113 HOH HOH . D 4 HOH A 114 520 114 HOH HOH . D 4 HOH A 115 521 115 HOH HOH . D 4 HOH A 116 522 116 HOH HOH . D 4 HOH A 117 523 117 HOH HOH . D 4 HOH A 118 524 118 HOH HOH . D 4 HOH A 119 525 119 HOH HOH . D 4 HOH A 120 526 120 HOH HOH . D 4 HOH A 121 527 121 HOH HOH . D 4 HOH A 122 528 122 HOH HOH . D 4 HOH A 123 529 123 HOH HOH . D 4 HOH A 124 530 124 HOH HOH . D 4 HOH A 125 531 125 HOH HOH . D 4 HOH A 126 532 126 HOH HOH . D 4 HOH A 127 533 127 HOH HOH . D 4 HOH A 128 534 128 HOH HOH . D 4 HOH A 129 535 129 HOH HOH . D 4 HOH A 130 536 130 HOH HOH . D 4 HOH A 131 537 131 HOH HOH . D 4 HOH A 132 538 132 HOH HOH . D 4 HOH A 133 539 133 HOH HOH . D 4 HOH A 134 540 134 HOH HOH . D 4 HOH A 135 541 135 HOH HOH . D 4 HOH A 136 542 136 HOH HOH . D 4 HOH A 137 543 137 HOH HOH . D 4 HOH A 138 544 138 HOH HOH . D 4 HOH A 139 545 139 HOH HOH . D 4 HOH A 140 546 140 HOH HOH . D 4 HOH A 141 547 141 HOH HOH . D 4 HOH A 142 548 142 HOH HOH . D 4 HOH A 143 549 143 HOH HOH . D 4 HOH A 144 550 144 HOH HOH . D 4 HOH A 145 551 145 HOH HOH . D 4 HOH A 146 552 146 HOH HOH . D 4 HOH A 147 553 147 HOH HOH . D 4 HOH A 148 554 148 HOH HOH . D 4 HOH A 149 555 149 HOH HOH . D 4 HOH A 150 556 150 HOH HOH . D 4 HOH A 151 557 151 HOH HOH . D 4 HOH A 152 558 152 HOH HOH . D 4 HOH A 153 559 153 HOH HOH . D 4 HOH A 154 560 154 HOH HOH . D 4 HOH A 155 561 155 HOH HOH . D 4 HOH A 156 562 156 HOH HOH . D 4 HOH A 157 563 157 HOH HOH . D 4 HOH A 158 564 158 HOH HOH . D 4 HOH A 159 565 159 HOH HOH . D 4 HOH A 160 566 160 HOH HOH . D 4 HOH A 161 567 161 HOH HOH . D 4 HOH A 162 568 162 HOH HOH . D 4 HOH A 163 569 163 HOH HOH . D 4 HOH A 164 570 164 HOH HOH . D 4 HOH A 165 571 165 HOH HOH . D 4 HOH A 166 572 166 HOH HOH . D 4 HOH A 167 573 167 HOH HOH . D 4 HOH A 168 574 168 HOH HOH . D 4 HOH A 169 575 169 HOH HOH . D 4 HOH A 170 576 170 HOH HOH . D 4 HOH A 171 577 171 HOH HOH . D 4 HOH A 172 578 172 HOH HOH . D 4 HOH A 173 579 173 HOH HOH . D 4 HOH A 174 580 174 HOH HOH . D 4 HOH A 175 581 175 HOH HOH . D 4 HOH A 176 582 176 HOH HOH . D 4 HOH A 177 583 177 HOH HOH . D 4 HOH A 178 584 178 HOH HOH . D 4 HOH A 179 585 179 HOH HOH . D 4 HOH A 180 586 180 HOH HOH . D 4 HOH A 181 587 181 HOH HOH . D 4 HOH A 182 588 182 HOH HOH . D 4 HOH A 183 589 183 HOH HOH . D 4 HOH A 184 590 184 HOH HOH . D 4 HOH A 185 591 185 HOH HOH . D 4 HOH A 186 592 186 HOH HOH . D 4 HOH A 187 593 187 HOH HOH . D 4 HOH A 188 594 188 HOH HOH . D 4 HOH A 189 595 189 HOH HOH . D 4 HOH A 190 596 190 HOH HOH . D 4 HOH A 191 597 191 HOH HOH . D 4 HOH A 192 598 192 HOH HOH . D 4 HOH A 193 599 193 HOH HOH . D 4 HOH A 194 600 194 HOH HOH . D 4 HOH A 195 601 195 HOH HOH . D 4 HOH A 196 602 196 HOH HOH . D 4 HOH A 197 603 197 HOH HOH . D 4 HOH A 198 604 198 HOH HOH . D 4 HOH A 199 605 199 HOH HOH . D 4 HOH A 200 606 200 HOH HOH . D 4 HOH A 201 607 201 HOH HOH . D 4 HOH A 202 608 202 HOH HOH . D 4 HOH A 203 609 203 HOH HOH . D 4 HOH A 204 610 204 HOH HOH . D 4 HOH A 205 611 205 HOH HOH . D 4 HOH A 206 612 206 HOH HOH . D 4 HOH A 207 613 207 HOH HOH . D 4 HOH A 208 614 208 HOH HOH . D 4 HOH A 209 615 209 HOH HOH . D 4 HOH A 210 616 210 HOH HOH . D 4 HOH A 211 617 211 HOH HOH . D 4 HOH A 212 618 212 HOH HOH . D 4 HOH A 213 619 213 HOH HOH . D 4 HOH A 214 620 214 HOH HOH . D 4 HOH A 215 621 215 HOH HOH . D 4 HOH A 216 622 216 HOH HOH . D 4 HOH A 217 623 217 HOH HOH . D 4 HOH A 218 624 218 HOH HOH . D 4 HOH A 219 625 219 HOH HOH . D 4 HOH A 220 626 220 HOH HOH . D 4 HOH A 221 627 221 HOH HOH . D 4 HOH A 222 628 222 HOH HOH . D 4 HOH A 223 629 223 HOH HOH . D 4 HOH A 224 630 224 HOH HOH . D 4 HOH A 225 631 225 HOH HOH . D 4 HOH A 226 632 226 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 70.22 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 11.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #