data_1DI0
#
_model_server_result.job_id            c2TrpUUSbWork8FaLoyeTQ 
_model_server_result.datetime_utc      '2024-10-24 04:32:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1di0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":197}' 
#
_entry.id    1DI0 
#
_exptl.entry_id    1DI0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    13 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1DI0 
_cell.length_a            142.25 
_cell.length_b            142.25 
_cell.length_c            242.3 
_cell.Z_PDB               90 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DI0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA pentameric 5 author_and_software_defined_assembly 1 
PISA decameric 10 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 242.3 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     1DI0 
_atom_sites.fract_transf_matrix[1][1]    0.00703 
_atom_sites.fract_transf_matrix[1][2]    0.004059 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004127 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 PO4 A 1 190 190 PO4 PO4 . 
G 2 PO4 A 1 191 191 PO4 PO4 . 
H 2 PO4 A 1 192 192 PO4 PO4 . 
I 2 PO4 B 1 193 190 PO4 PO4 . 
J 2 PO4 B 1 194 191 PO4 PO4 . 
K 2 PO4 B 1 195 192 PO4 PO4 . 
L 2 PO4 C 1 196 190 PO4 PO4 . 
M 2 PO4 C 1 197 192 PO4 PO4 . 
N 2 PO4 D 1 198 190 PO4 PO4 . 
O 2 PO4 D 1 199 192 PO4 PO4 . 
P 2 PO4 E 1 200 190 PO4 PO4 . 
Q 2 PO4 E 1 201 191 PO4 PO4 . 
R 2 PO4 E 1 202 192 PO4 PO4 . 
S 3 HOH A 1 2004 2004 HOH WAT . 
S 3 HOH A 2 2008 2008 HOH WAT . 
S 3 HOH A 3 2014 2014 HOH WAT . 
S 3 HOH A 4 2023 2023 HOH WAT . 
S 3 HOH A 5 2026 2026 HOH WAT . 
S 3 HOH A 6 2035 2035 HOH WAT . 
S 3 HOH A 7 2036 2036 HOH WAT . 
S 3 HOH A 8 2047 2047 HOH WAT . 
S 3 HOH A 9 2048 2048 HOH WAT . 
S 3 HOH A 10 2049 2049 HOH WAT . 
T 3 HOH B 1 2002 2002 HOH WAT . 
T 3 HOH B 2 2003 2003 HOH WAT . 
T 3 HOH B 3 2006 2006 HOH WAT . 
T 3 HOH B 4 2007 2007 HOH WAT . 
T 3 HOH B 5 2022 2022 HOH WAT . 
T 3 HOH B 6 2025 2025 HOH WAT . 
T 3 HOH B 7 2043 2043 HOH WAT . 
T 3 HOH B 8 2046 2046 HOH WAT . 
U 3 HOH C 1 2005 2005 HOH WAT . 
U 3 HOH C 2 2009 2009 HOH WAT . 
U 3 HOH C 3 2012 2012 HOH WAT . 
U 3 HOH C 4 2016 2016 HOH WAT . 
U 3 HOH C 5 2021 2021 HOH WAT . 
U 3 HOH C 6 2027 2027 HOH WAT . 
U 3 HOH C 7 2031 2031 HOH WAT . 
U 3 HOH C 8 2033 2033 HOH WAT . 
U 3 HOH C 9 2034 2034 HOH WAT . 
U 3 HOH C 10 2037 2037 HOH WAT . 
U 3 HOH C 11 2038 2038 HOH WAT . 
U 3 HOH C 12 2041 2041 HOH WAT . 
V 3 HOH D 1 2013 2013 HOH WAT . 
V 3 HOH D 2 2017 2017 HOH WAT . 
V 3 HOH D 3 2028 2028 HOH WAT . 
V 3 HOH D 4 2029 2029 HOH WAT . 
V 3 HOH D 5 2039 2039 HOH WAT . 
V 3 HOH D 6 2040 2040 HOH WAT . 
V 3 HOH D 7 2044 2044 HOH WAT . 
W 3 HOH E 1 2001 2001 HOH WAT . 
W 3 HOH E 2 2015 2015 HOH WAT . 
W 3 HOH E 3 2018 2018 HOH WAT . 
W 3 HOH E 4 2019 2019 HOH WAT . 
W 3 HOH E 5 2020 2020 HOH WAT . 
W 3 HOH E 6 2024 2024 HOH WAT . 
W 3 HOH E 7 2030 2030 HOH WAT . 
W 3 HOH E 8 2032 2032 HOH WAT . 
W 3 HOH E 9 2042 2042 HOH WAT . 
W 3 HOH E 10 2045 2045 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . M 2 24.72 72.33 116.087 0.5 57.67 ? P PO4 197 C 1 
HETATM 2 O O1 PO4 . . . M 2 25.484 73.432 115.437 0.5 53.21 ? O1 PO4 197 C 1 
HETATM 3 O O2 PO4 . . . M 2 23.468 72.075 115.327 0.5 55.82 ? O2 PO4 197 C 1 
HETATM 4 O O3 PO4 . . . M 2 24.415 72.718 117.488 0.5 53.02 ? O3 PO4 197 C 1 
HETATM 5 O O4 PO4 . . . M 2 25.519 71.095 116.089 0.5 55.1 ? O4 PO4 197 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           5 
#