data_1DJ6 # _model_server_result.job_id LOY0Lcct_OMSf0hgUcj7Qg _model_server_result.datetime_utc '2024-10-10 10:21:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1DJ6 # _exptl.entry_id 1DJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DJ6 _cell.length_a 17.93 _cell.length_b 31.36 _cell.length_c 44.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DJ6 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OP2 DC 3 A DC 3 4_465 C MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc2 F O HOH . A HOH 51 4_465 C MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc3 F O HOH . A HOH 82 1_555 C MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc4 F O HOH . A HOH 84 4_465 C MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 B N3 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 B O2 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 B N4 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DC 5 A DC 5 1_555 B N1 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N4 DC 5 A DC 5 1_555 B O6 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O2 DC 5 A DC 5 1_555 B N2 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DG 6 A DG 6 1_555 B N3 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N2 DG 6 A DG 6 1_555 B O2 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O6 DG 6 A DG 6 1_555 B N4 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DJ6 _atom_sites.fract_transf_matrix[1][1] 0.055772 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 104 80 MG MG . D 3 104 A 1 13 13 104 104 . E 3 104 B 1 14 14 104 104 . F 4 HOH A 1 17 17 HOH WAT . F 4 HOH A 2 21 21 HOH WAT . F 4 HOH A 3 26 26 HOH WAT . F 4 HOH A 4 27 27 HOH WAT . F 4 HOH A 5 31 31 HOH WAT . F 4 HOH A 6 33 33 HOH WAT . F 4 HOH A 7 34 34 HOH WAT . F 4 HOH A 8 35 35 HOH WAT . F 4 HOH A 9 36 36 HOH WAT . F 4 HOH A 10 37 37 HOH WAT . F 4 HOH A 11 39 39 HOH WAT . F 4 HOH A 12 40 40 HOH WAT . F 4 HOH A 13 41 41 HOH WAT . F 4 HOH A 14 42 42 HOH WAT . F 4 HOH A 15 43 43 HOH WAT . F 4 HOH A 16 44 44 HOH WAT . F 4 HOH A 17 45 45 HOH WAT . F 4 HOH A 18 46 46 HOH WAT . F 4 HOH A 19 47 47 HOH WAT . F 4 HOH A 20 49 49 HOH WAT . F 4 HOH A 21 50 50 HOH WAT . F 4 HOH A 22 51 51 HOH WAT . F 4 HOH A 23 53 53 HOH WAT . F 4 HOH A 24 54 54 HOH WAT . F 4 HOH A 25 55 55 HOH WAT . F 4 HOH A 26 56 56 HOH WAT . F 4 HOH A 27 57 57 HOH WAT . F 4 HOH A 28 58 58 HOH WAT . F 4 HOH A 29 59 59 HOH WAT . F 4 HOH A 30 61 61 HOH WAT . F 4 HOH A 31 64 64 HOH WAT . F 4 HOH A 32 65 65 HOH WAT . F 4 HOH A 33 68 68 HOH WAT . F 4 HOH A 34 72 72 HOH WAT . F 4 HOH A 35 73 73 HOH WAT . F 4 HOH A 36 74 74 HOH WAT . F 4 HOH A 37 75 75 HOH WAT . F 4 HOH A 38 79 79 HOH WAT . F 4 HOH A 39 81 81 HOH WAT . F 4 HOH A 40 82 82 HOH WAT . F 4 HOH A 41 83 83 HOH WAT . F 4 HOH A 42 84 84 HOH WAT . F 4 HOH A 43 85 85 HOH WAT . F 4 HOH A 44 86 86 HOH WAT . F 4 HOH A 45 87 87 HOH WAT . F 4 HOH A 46 88 88 HOH WAT . F 4 HOH A 47 89 89 HOH WAT . F 4 HOH A 48 90 90 HOH WAT . F 4 HOH A 49 91 91 HOH WAT . F 4 HOH A 50 92 92 HOH WAT . F 4 HOH A 51 93 93 HOH WAT . F 4 HOH A 52 97 97 HOH WAT . F 4 HOH A 53 99 99 HOH WAT . F 4 HOH A 54 101 101 HOH WAT . F 4 HOH A 55 102 102 HOH WAT . F 4 HOH A 56 103 103 HOH WAT . G 4 HOH B 1 15 15 HOH WAT . G 4 HOH B 2 16 16 HOH WAT . G 4 HOH B 3 18 18 HOH WAT . G 4 HOH B 4 19 19 HOH WAT . G 4 HOH B 5 20 20 HOH WAT . G 4 HOH B 6 22 22 HOH WAT . G 4 HOH B 7 23 23 HOH WAT . G 4 HOH B 8 24 24 HOH WAT . G 4 HOH B 9 25 25 HOH WAT . G 4 HOH B 10 28 28 HOH WAT . G 4 HOH B 11 29 29 HOH WAT . G 4 HOH B 12 30 30 HOH WAT . G 4 HOH B 13 32 32 HOH WAT . G 4 HOH B 14 38 38 HOH WAT . G 4 HOH B 15 48 48 HOH WAT . G 4 HOH B 16 52 52 HOH WAT . G 4 HOH B 17 60 60 HOH WAT . G 4 HOH B 18 62 62 HOH WAT . G 4 HOH B 19 63 63 HOH WAT . G 4 HOH B 20 66 66 HOH WAT . G 4 HOH B 21 67 67 HOH WAT . G 4 HOH B 22 69 69 HOH WAT . G 4 HOH B 23 70 70 HOH WAT . G 4 HOH B 24 71 71 HOH WAT . G 4 HOH B 25 76 76 HOH WAT . G 4 HOH B 26 77 77 HOH WAT . G 4 HOH B 27 78 78 HOH WAT . G 4 HOH B 28 94 94 HOH WAT . G 4 HOH B 29 95 95 HOH WAT . G 4 HOH B 30 96 96 HOH WAT . G 4 HOH B 31 98 98 HOH WAT . G 4 HOH B 32 100 100 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 1.916 _atom_site.Cartn_y 24.29 _atom_site.Cartn_z 0.224 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 104 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #