data_1DJL # _model_server_result.job_id wKi0dGloG3Kb5T4ExQ00Hw _model_server_result.datetime_utc '2024-10-10 13:31:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1djl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2137}' # _entry.id 1DJL # _exptl.entry_id 1DJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DJL _cell.length_a 58.104 _cell.length_b 58.104 _cell.length_c 250.773 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 1DJL _atom_sites.fract_transf_matrix[1][1] 0.01721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1138 1138 SO4 SO4 . D 3 NAP A 1 1136 1136 NAP NAP . E 4 GOL A 1 1137 1137 GOL GOL . F 2 SO4 B 1 2138 2138 SO4 SO4 . G 3 NAP B 1 2136 2136 NAP NAP . H 4 GOL B 1 2137 2137 GOL GOL . I 5 HOH A 1 6 6 HOH HOH . I 5 HOH A 2 8 8 HOH HOH . I 5 HOH A 3 9 9 HOH HOH . I 5 HOH A 4 10 10 HOH HOH . I 5 HOH A 5 11 11 HOH HOH . I 5 HOH A 6 12 12 HOH HOH . I 5 HOH A 7 13 13 HOH HOH . I 5 HOH A 8 17 17 HOH HOH . I 5 HOH A 9 19 19 HOH HOH . I 5 HOH A 10 21 21 HOH HOH . I 5 HOH A 11 22 22 HOH HOH . I 5 HOH A 12 23 23 HOH HOH . I 5 HOH A 13 24 24 HOH HOH . I 5 HOH A 14 27 27 HOH HOH . I 5 HOH A 15 29 29 HOH HOH . I 5 HOH A 16 37 37 HOH HOH . I 5 HOH A 17 39 39 HOH HOH . I 5 HOH A 18 41 41 HOH HOH . I 5 HOH A 19 42 42 HOH HOH . I 5 HOH A 20 44 44 HOH HOH . I 5 HOH A 21 45 45 HOH HOH . I 5 HOH A 22 48 48 HOH HOH . I 5 HOH A 23 49 49 HOH HOH . I 5 HOH A 24 54 54 HOH HOH . I 5 HOH A 25 55 55 HOH HOH . I 5 HOH A 26 58 58 HOH HOH . I 5 HOH A 27 59 59 HOH HOH . I 5 HOH A 28 61 61 HOH HOH . I 5 HOH A 29 62 62 HOH HOH . I 5 HOH A 30 63 63 HOH HOH . I 5 HOH A 31 64 64 HOH HOH . I 5 HOH A 32 65 65 HOH HOH . I 5 HOH A 33 68 68 HOH HOH . I 5 HOH A 34 70 70 HOH HOH . I 5 HOH A 35 72 72 HOH HOH . I 5 HOH A 36 73 73 HOH HOH . I 5 HOH A 37 74 74 HOH HOH . I 5 HOH A 38 75 75 HOH HOH . I 5 HOH A 39 77 77 HOH HOH . I 5 HOH A 40 79 79 HOH HOH . I 5 HOH A 41 80 80 HOH HOH . J 5 HOH B 1 1 1 HOH HOH . J 5 HOH B 2 2 2 HOH HOH . J 5 HOH B 3 3 3 HOH HOH . J 5 HOH B 4 4 4 HOH HOH . J 5 HOH B 5 5 5 HOH HOH . J 5 HOH B 6 7 7 HOH HOH . J 5 HOH B 7 14 14 HOH HOH . J 5 HOH B 8 15 15 HOH HOH . J 5 HOH B 9 16 16 HOH HOH . J 5 HOH B 10 18 18 HOH HOH . J 5 HOH B 11 20 20 HOH HOH . J 5 HOH B 12 25 25 HOH HOH . J 5 HOH B 13 26 26 HOH HOH . J 5 HOH B 14 28 28 HOH HOH . J 5 HOH B 15 30 30 HOH HOH . J 5 HOH B 16 31 31 HOH HOH . J 5 HOH B 17 32 32 HOH HOH . J 5 HOH B 18 33 33 HOH HOH . J 5 HOH B 19 34 34 HOH HOH . J 5 HOH B 20 35 35 HOH HOH . J 5 HOH B 21 36 36 HOH HOH . J 5 HOH B 22 38 38 HOH HOH . J 5 HOH B 23 40 40 HOH HOH . J 5 HOH B 24 43 43 HOH HOH . J 5 HOH B 25 46 46 HOH HOH . J 5 HOH B 26 47 47 HOH HOH . J 5 HOH B 27 50 50 HOH HOH . J 5 HOH B 28 51 51 HOH HOH . J 5 HOH B 29 52 52 HOH HOH . J 5 HOH B 30 53 53 HOH HOH . J 5 HOH B 31 56 56 HOH HOH . J 5 HOH B 32 57 57 HOH HOH . J 5 HOH B 33 60 60 HOH HOH . J 5 HOH B 34 66 66 HOH HOH . J 5 HOH B 35 67 67 HOH HOH . J 5 HOH B 36 69 69 HOH HOH . J 5 HOH B 37 71 71 HOH HOH . J 5 HOH B 38 76 76 HOH HOH . J 5 HOH B 39 78 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 6.611 28.813 14.471 1 45.89 ? C1 GOL 2137 B 1 HETATM 2 O O1 GOL . . . H 4 7.172 27.792 13.644 1 45.64 ? O1 GOL 2137 B 1 HETATM 3 C C2 GOL . . . H 4 7.077 28.649 15.914 1 45.86 ? C2 GOL 2137 B 1 HETATM 4 O O2 GOL . . . H 4 6.519 29.689 16.723 1 47.14 ? O2 GOL 2137 B 1 HETATM 5 C C3 GOL . . . H 4 8.605 28.707 15.966 1 45.64 ? C3 GOL 2137 B 1 HETATM 6 O O3 GOL . . . H 4 9.148 27.679 15.128 1 44.98 ? O3 GOL 2137 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #