data_1DMG # _model_server_result.job_id kCTbibtaeZD6RPi7NAmtow _model_server_result.datetime_utc '2025-03-03 00:10:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dmg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":510}' # _entry.id 1DMG # _exptl.entry_id 1DMG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DMG _cell.length_a 43 _cell.length_b 48.6 _cell.length_c 112 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1DMG _atom_sites.fract_transf_matrix[1][1] 0.023256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020576 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008929 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 510 510 CIT CIT . C 3 HOH A 1 511 1 HOH HOH . C 3 HOH A 2 512 2 HOH HOH . C 3 HOH A 3 513 3 HOH HOH . C 3 HOH A 4 514 4 HOH HOH . C 3 HOH A 5 515 5 HOH HOH . C 3 HOH A 6 516 6 HOH HOH . C 3 HOH A 7 517 7 HOH HOH . C 3 HOH A 8 518 8 HOH HOH . C 3 HOH A 9 519 9 HOH HOH . C 3 HOH A 10 520 10 HOH HOH . C 3 HOH A 11 521 11 HOH HOH . C 3 HOH A 12 522 13 HOH HOH . C 3 HOH A 13 523 14 HOH HOH . C 3 HOH A 14 524 15 HOH HOH . C 3 HOH A 15 525 16 HOH HOH . C 3 HOH A 16 526 17 HOH HOH . C 3 HOH A 17 527 18 HOH HOH . C 3 HOH A 18 528 19 HOH HOH . C 3 HOH A 19 529 20 HOH HOH . C 3 HOH A 20 530 23 HOH HOH . C 3 HOH A 21 531 24 HOH HOH . C 3 HOH A 22 532 25 HOH HOH . C 3 HOH A 23 533 26 HOH HOH . C 3 HOH A 24 534 28 HOH HOH . C 3 HOH A 25 535 29 HOH HOH . C 3 HOH A 26 536 30 HOH HOH . C 3 HOH A 27 537 31 HOH HOH . C 3 HOH A 28 538 32 HOH HOH . C 3 HOH A 29 539 33 HOH HOH . C 3 HOH A 30 540 34 HOH HOH . C 3 HOH A 31 541 35 HOH HOH . C 3 HOH A 32 542 38 HOH HOH . C 3 HOH A 33 543 39 HOH HOH . C 3 HOH A 34 544 40 HOH HOH . C 3 HOH A 35 545 41 HOH HOH . C 3 HOH A 36 546 42 HOH HOH . C 3 HOH A 37 547 43 HOH HOH . C 3 HOH A 38 548 45 HOH HOH . C 3 HOH A 39 549 46 HOH HOH . C 3 HOH A 40 550 47 HOH HOH . C 3 HOH A 41 551 48 HOH HOH . C 3 HOH A 42 552 49 HOH HOH . C 3 HOH A 43 553 51 HOH HOH . C 3 HOH A 44 554 53 HOH HOH . C 3 HOH A 45 555 55 HOH HOH . C 3 HOH A 46 556 56 HOH HOH . C 3 HOH A 47 557 58 HOH HOH . C 3 HOH A 48 558 59 HOH HOH . C 3 HOH A 49 559 60 HOH HOH . C 3 HOH A 50 560 61 HOH HOH . C 3 HOH A 51 561 62 HOH HOH . C 3 HOH A 52 562 63 HOH HOH . C 3 HOH A 53 563 65 HOH HOH . C 3 HOH A 54 564 66 HOH HOH . C 3 HOH A 55 565 67 HOH HOH . C 3 HOH A 56 566 68 HOH HOH . C 3 HOH A 57 567 69 HOH HOH . C 3 HOH A 58 568 70 HOH HOH . C 3 HOH A 59 569 71 HOH HOH . C 3 HOH A 60 570 72 HOH HOH . C 3 HOH A 61 571 73 HOH HOH . C 3 HOH A 62 572 77 HOH HOH . C 3 HOH A 63 573 78 HOH HOH . C 3 HOH A 64 574 79 HOH HOH . C 3 HOH A 65 575 80 HOH HOH . C 3 HOH A 66 576 81 HOH HOH . C 3 HOH A 67 577 83 HOH HOH . C 3 HOH A 68 578 84 HOH HOH . C 3 HOH A 69 579 90 HOH HOH . C 3 HOH A 70 580 93 HOH HOH . C 3 HOH A 71 581 94 HOH HOH . C 3 HOH A 72 582 95 HOH HOH . C 3 HOH A 73 583 97 HOH HOH . C 3 HOH A 74 584 98 HOH HOH . C 3 HOH A 75 585 99 HOH HOH . C 3 HOH A 76 586 101 HOH HOH . C 3 HOH A 77 587 102 HOH HOH . C 3 HOH A 78 588 104 HOH HOH . C 3 HOH A 79 589 106 HOH HOH . C 3 HOH A 80 590 110 HOH HOH . C 3 HOH A 81 591 111 HOH HOH . C 3 HOH A 82 592 129 HOH HOH . C 3 HOH A 83 593 271 HOH HOH . C 3 HOH A 84 594 274 HOH HOH . C 3 HOH A 85 595 277 HOH HOH . C 3 HOH A 86 596 278 HOH HOH . C 3 HOH A 87 597 279 HOH HOH . C 3 HOH A 88 598 280 HOH HOH . C 3 HOH A 89 599 283 HOH HOH . C 3 HOH A 90 600 284 HOH HOH . C 3 HOH A 91 601 285 HOH HOH . C 3 HOH A 92 602 286 HOH HOH . C 3 HOH A 93 603 288 HOH HOH . C 3 HOH A 94 604 289 HOH HOH . C 3 HOH A 95 605 290 HOH HOH . C 3 HOH A 96 606 292 HOH HOH . C 3 HOH A 97 607 294 HOH HOH . C 3 HOH A 98 608 296 HOH HOH . C 3 HOH A 99 609 298 HOH HOH . C 3 HOH A 100 610 299 HOH HOH . C 3 HOH A 101 611 302 HOH HOH . C 3 HOH A 102 612 305 HOH HOH . C 3 HOH A 103 613 307 HOH HOH . C 3 HOH A 104 614 309 HOH HOH . C 3 HOH A 105 615 310 HOH HOH . C 3 HOH A 106 616 311 HOH HOH . C 3 HOH A 107 617 312 HOH HOH . C 3 HOH A 108 618 319 HOH HOH . C 3 HOH A 109 619 321 HOH HOH . C 3 HOH A 110 620 322 HOH HOH . C 3 HOH A 111 621 323 HOH HOH . C 3 HOH A 112 622 324 HOH HOH . C 3 HOH A 113 623 325 HOH HOH . C 3 HOH A 114 624 328 HOH HOH . C 3 HOH A 115 625 331 HOH HOH . C 3 HOH A 116 626 332 HOH HOH . C 3 HOH A 117 627 333 HOH HOH . C 3 HOH A 118 628 334 HOH HOH . C 3 HOH A 119 629 336 HOH HOH . C 3 HOH A 120 630 337 HOH HOH . C 3 HOH A 121 631 338 HOH HOH . C 3 HOH A 122 632 339 HOH HOH . C 3 HOH A 123 633 340 HOH HOH . C 3 HOH A 124 634 341 HOH HOH . C 3 HOH A 125 635 342 HOH HOH . C 3 HOH A 126 636 347 HOH HOH . C 3 HOH A 127 637 349 HOH HOH . C 3 HOH A 128 638 350 HOH HOH . C 3 HOH A 129 639 353 HOH HOH . C 3 HOH A 130 640 354 HOH HOH . C 3 HOH A 131 641 355 HOH HOH . C 3 HOH A 132 642 356 HOH HOH . C 3 HOH A 133 643 357 HOH HOH . C 3 HOH A 134 644 358 HOH HOH . C 3 HOH A 135 645 361 HOH HOH . C 3 HOH A 136 646 362 HOH HOH . C 3 HOH A 137 647 363 HOH HOH . C 3 HOH A 138 648 364 HOH HOH . C 3 HOH A 139 649 365 HOH HOH . C 3 HOH A 140 650 366 HOH HOH . C 3 HOH A 141 651 367 HOH HOH . C 3 HOH A 142 652 368 HOH HOH . C 3 HOH A 143 653 370 HOH HOH . C 3 HOH A 144 654 372 HOH HOH . C 3 HOH A 145 655 373 HOH HOH . C 3 HOH A 146 656 374 HOH HOH . C 3 HOH A 147 657 376 HOH HOH . C 3 HOH A 148 658 377 HOH HOH . C 3 HOH A 149 659 378 HOH HOH . C 3 HOH A 150 660 379 HOH HOH . C 3 HOH A 151 661 383 HOH HOH . C 3 HOH A 152 662 384 HOH HOH . C 3 HOH A 153 663 388 HOH HOH . C 3 HOH A 154 664 391 HOH HOH . C 3 HOH A 155 665 393 HOH HOH . C 3 HOH A 156 666 394 HOH HOH . C 3 HOH A 157 667 395 HOH HOH . C 3 HOH A 158 668 396 HOH HOH . C 3 HOH A 159 669 397 HOH HOH . C 3 HOH A 160 670 398 HOH HOH . C 3 HOH A 161 671 400 HOH HOH . C 3 HOH A 162 672 401 HOH HOH . C 3 HOH A 163 673 402 HOH HOH . C 3 HOH A 164 674 403 HOH HOH . C 3 HOH A 165 675 406 HOH HOH . C 3 HOH A 166 676 407 HOH HOH . C 3 HOH A 167 677 410 HOH HOH . C 3 HOH A 168 678 411 HOH HOH . C 3 HOH A 169 679 412 HOH HOH . C 3 HOH A 170 680 413 HOH HOH . C 3 HOH A 171 681 415 HOH HOH . C 3 HOH A 172 682 416 HOH HOH . C 3 HOH A 173 683 417 HOH HOH . C 3 HOH A 174 684 418 HOH HOH . C 3 HOH A 175 685 419 HOH HOH . C 3 HOH A 176 686 420 HOH HOH . C 3 HOH A 177 687 422 HOH HOH . C 3 HOH A 178 688 423 HOH HOH . C 3 HOH A 179 689 424 HOH HOH . C 3 HOH A 180 690 425 HOH HOH . C 3 HOH A 181 691 426 HOH HOH . C 3 HOH A 182 692 428 HOH HOH . C 3 HOH A 183 693 429 HOH HOH . C 3 HOH A 184 694 430 HOH HOH . C 3 HOH A 185 695 432 HOH HOH . C 3 HOH A 186 696 436 HOH HOH . C 3 HOH A 187 697 438 HOH HOH . C 3 HOH A 188 698 439 HOH HOH . C 3 HOH A 189 699 440 HOH HOH . C 3 HOH A 190 700 441 HOH HOH . C 3 HOH A 191 701 446 HOH HOH . C 3 HOH A 192 702 447 HOH HOH . C 3 HOH A 193 703 448 HOH HOH . C 3 HOH A 194 704 452 HOH HOH . C 3 HOH A 195 705 455 HOH HOH . C 3 HOH A 196 706 457 HOH HOH . C 3 HOH A 197 707 458 HOH HOH . C 3 HOH A 198 708 459 HOH HOH . C 3 HOH A 199 709 460 HOH HOH . C 3 HOH A 200 710 461 HOH HOH . C 3 HOH A 201 711 463 HOH HOH . C 3 HOH A 202 712 464 HOH HOH . C 3 HOH A 203 713 467 HOH HOH . C 3 HOH A 204 714 468 HOH HOH . C 3 HOH A 205 715 472 HOH HOH . C 3 HOH A 206 716 475 HOH HOH . C 3 HOH A 207 717 481 HOH HOH . C 3 HOH A 208 718 482 HOH HOH . C 3 HOH A 209 719 484 HOH HOH . C 3 HOH A 210 720 486 HOH HOH . C 3 HOH A 211 721 489 HOH HOH . C 3 HOH A 212 722 494 HOH HOH . C 3 HOH A 213 723 496 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 -24.919 28.075 -26.589 1 44.53 ? C1 CIT 510 A 1 HETATM 2 O O1 CIT . . . B 2 -24.143 28.133 -25.607 1 45.84 ? O1 CIT 510 A 1 HETATM 3 O O2 CIT . . . B 2 -24.955 29.279 -27.373 1 45.28 ? O2 CIT 510 A 1 HETATM 4 C C2 CIT . . . B 2 -25.819 26.938 -27.074 1 42.76 ? C2 CIT 510 A 1 HETATM 5 C C3 CIT . . . B 2 -26.043 25.769 -26.074 1 40.45 ? C3 CIT 510 A 1 HETATM 6 O O7 CIT . . . B 2 -24.813 25.134 -25.633 1 37.99 ? O7 CIT 510 A 1 HETATM 7 C C4 CIT . . . B 2 -26.942 24.717 -26.762 1 39.37 ? C4 CIT 510 A 1 HETATM 8 C C5 CIT . . . B 2 -27.373 23.564 -25.85 1 40.57 ? C5 CIT 510 A 1 HETATM 9 O O3 CIT . . . B 2 -28.092 23.517 -24.808 1 40.15 ? O3 CIT 510 A 1 HETATM 10 O O4 CIT . . . B 2 -26.844 22.31 -26.299 1 39.57 ? O4 CIT 510 A 1 HETATM 11 C C6 CIT . . . B 2 -26.816 26.309 -24.857 1 41.25 ? C6 CIT 510 A 1 HETATM 12 O O5 CIT . . . B 2 -27.874 26.942 -25.105 1 40.51 ? O5 CIT 510 A 1 HETATM 13 O O6 CIT . . . B 2 -26.47 26.179 -23.454 1 40.38 ? O6 CIT 510 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #