# Name: PGD # Created by ModelServer 0.9.11 # model_server_result.job_id: mWR7bUuge3Ofp5FDFjiVpA # model_server_result.datetime_utc: 2024-08-14 02:47:31 # model_server_result.server_version: 0.9.11 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 1dmr # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"B","auth_seq_id":782} # model_server_stats.io_time_ms: 3 # model_server_stats.parse_time_ms: 40 # model_server_stats.create_model_time_ms: 25 # model_server_stats.query_time_ms: 370 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 47 @MOLECULE PGD 47 52 1 **** **** @ATOM 1 PB 3.644 48.627 30.670 P.3 1 PGD 0.000 2 O1B 4.261 50.107 31.293 O.2 1 PGD 0.000 3 O2B 2.613 48.766 29.354 O.3 1 PGD 0.000 4 O3B 2.808 48.053 31.945 O.3 1 PGD 0.000 5 O3A 1.305 46.865 33.671 O.3 1 PGD 0.000 6 PA 2.299 46.530 32.304 P.3 1 PGD 0.000 7 O1A 1.542 45.902 30.956 O.2 1 PGD 0.000 8 O2A 3.698 45.712 32.849 O.3 1 PGD 0.000 9 O5' 4.966 47.524 30.462 O.3 1 PGD 0.000 10 C5' 5.086 47.124 29.130 C.3 1 PGD 0.000 11 C4' 6.600 47.016 28.861 C.3 1 PGD 0.000 12 O4' 6.768 46.283 27.657 O.3 1 PGD 0.000 13 C3' 7.230 48.382 28.689 C.3 1 PGD 0.000 14 O3' 8.352 48.566 29.530 O.3 1 PGD 0.000 15 C2' 7.585 48.396 27.218 C.3 1 PGD 0.000 16 O2' 8.723 49.139 26.927 O.3 1 PGD 0.000 17 C1' 7.846 46.921 26.968 C.3 1 PGD 0.000 18 N9 7.719 46.516 25.576 N.ar 1 PGD 0.000 19 C8 6.886 47.031 24.619 C.ar 1 PGD 0.000 20 N7 6.997 46.377 23.422 N.ar 1 PGD 0.000 21 C5 7.941 45.441 23.666 C.ar 1 PGD 0.000 22 C6 8.478 44.496 22.803 C.2 1 PGD 0.000 23 O6 8.130 44.374 21.643 O.2 1 PGD 0.000 24 N1 9.444 43.665 23.298 N.am 1 PGD 0.000 25 C2 9.839 43.767 24.619 C.cat 1 PGD 0.000 26 N2 10.824 42.868 25.079 N.pl3 1 PGD 0.000 27 N3 9.324 44.705 25.475 N.2 1 PGD 0.000 28 C4 8.368 45.527 24.947 C.ar 1 PGD 0.000 29 C10 0.028 47.265 33.286 C.3 1 PGD 0.000 30 C11 -0.835 46.853 34.501 C.3 1 PGD 0.000 31 O11 -0.626 47.781 35.542 O.3 1 PGD 0.000 32 C12 -2.298 46.828 34.098 C.2 1 PGD 0.000 33 S12 -2.810 46.213 32.491 S.3 1 PGD 0.000 34 C13 -3.262 47.233 34.955 C.2 1 PGD 0.000 35 S13 -4.974 47.312 34.445 S.3 1 PGD 0.000 36 C14 -2.924 47.637 36.353 C.3 1 PGD 0.000 37 N15 -3.306 49.055 36.556 N.2 1 PGD 0.000 38 C16 -2.999 49.507 37.896 C.2 1 PGD 0.000 39 C17 -3.788 50.401 38.620 C.2 1 PGD 0.000 40 O17 -4.826 50.883 38.191 O.2 1 PGD 0.000 41 N18 -3.399 50.760 39.874 N.2 1 PGD 0.000 42 C19 -2.268 50.248 40.436 C.cat 1 PGD 0.000 43 N19 -1.878 50.637 41.740 N.pl3 1 PGD 0.000 44 N20 -1.492 49.367 39.757 N.2 1 PGD 0.000 45 C21 -1.844 48.994 38.493 C.2 1 PGD 0.000 46 N22 -0.998 48.051 37.832 N.am 1 PGD 0.000 47 C23 -1.430 47.355 36.625 C.3 1 PGD 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 9 1 5 4 6 1 6 5 6 1 7 5 29 1 8 6 7 2 9 6 8 1 10 9 10 1 11 10 11 1 12 11 12 1 13 11 13 1 14 12 17 1 15 13 14 1 16 13 15 1 17 15 16 1 18 15 17 1 19 17 18 1 20 18 19 ar 21 18 28 ar 22 19 20 ar 23 20 21 ar 24 21 22 1 25 21 28 ar 26 22 23 2 27 22 24 1 28 24 25 1 29 25 26 1 30 25 27 2 31 27 28 1 32 29 30 1 33 30 31 1 34 30 32 1 35 31 47 1 36 32 33 1 37 32 34 2 38 34 35 1 39 34 36 1 40 36 37 1 41 36 47 1 42 37 38 2 43 38 39 1 44 38 45 1 45 39 40 2 46 39 41 1 47 41 42 2 48 42 43 1 49 42 44 1 50 44 45 2 51 45 46 1 52 46 47 1 @SUBSTRUCTURE 1 PGD 1