# Name: PGD # Created by ModelServer 0.9.12 # model_server_result.job_id: ma5_8zVFZQbwQ5KeXPvuZQ # model_server_result.datetime_utc: 2025-03-24 06:10:11 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 1dmr # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"C","auth_seq_id":783} # model_server_stats.io_time_ms: 103 # model_server_stats.parse_time_ms: 8 # model_server_stats.create_model_time_ms: 19 # model_server_stats.query_time_ms: 324 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 47 @MOLECULE PGD 47 52 1 **** **** @ATOM 1 PB -8.957 54.093 36.016 P.3 1 PGD 0.000 2 O1B -8.073 55.403 35.365 O.2 1 PGD 0.000 3 O2B -8.063 53.046 37.008 O.3 1 PGD 0.000 4 O3B -9.468 53.295 34.704 O.3 1 PGD 0.000 5 O3A -9.752 51.577 32.761 O.3 1 PGD 0.000 6 PA -10.298 51.940 34.376 P.3 1 PGD 0.000 7 O1A -11.958 52.291 34.333 O.2 1 PGD 0.000 8 O2A -9.822 50.766 35.488 O.3 1 PGD 0.000 9 O5' -10.392 54.582 36.829 O.3 1 PGD 0.000 10 C5' -11.308 55.291 36.066 C.3 1 PGD 0.000 11 C4' -11.900 56.330 37.036 C.3 1 PGD 0.000 12 O4' -12.313 55.668 38.216 O.3 1 PGD 0.000 13 C3' -10.869 57.377 37.430 C.3 1 PGD 0.000 14 O3' -11.244 58.617 36.888 O.3 1 PGD 0.000 15 C2' -10.877 57.353 38.941 C.3 1 PGD 0.000 16 O2' -10.841 58.638 39.524 O.3 1 PGD 0.000 17 C1' -12.222 56.696 39.215 C.3 1 PGD 0.000 18 N9 -12.288 56.058 40.524 N.ar 1 PGD 0.000 19 C8 -11.270 55.580 41.294 C.ar 1 PGD 0.000 20 N7 -11.702 55.023 42.456 N.ar 1 PGD 0.000 21 C5 -13.039 55.161 42.400 C.ar 1 PGD 0.000 22 C6 -14.031 54.780 43.294 C.2 1 PGD 0.000 23 O6 -13.866 54.215 44.367 O.2 1 PGD 0.000 24 N1 -15.320 55.052 42.939 N.am 1 PGD 0.000 25 C2 -15.642 55.701 41.765 C.cat 1 PGD 0.000 26 N2 -17.002 55.946 41.493 N.pl3 1 PGD 0.000 27 N3 -14.668 56.070 40.874 N.2 1 PGD 0.000 28 C4 -13.385 55.779 41.239 C.ar 1 PGD 0.000 29 C10 -8.455 51.091 32.836 C.3 1 PGD 0.000 30 C11 -8.085 50.766 31.365 C.3 1 PGD 0.000 31 O11 -7.613 51.970 30.813 O.3 1 PGD 0.000 32 C12 -7.050 49.667 31.356 C.2 1 PGD 0.000 33 S12 -7.335 48.042 32.119 S.3 1 PGD 0.000 34 C13 -5.947 49.751 30.583 C.2 1 PGD 0.000 35 S13 -4.768 48.408 30.612 S.3 1 PGD 0.000 36 C14 -5.619 50.990 29.814 C.3 1 PGD 0.000 37 N15 -4.658 51.830 30.542 N.2 1 PGD 0.000 38 C16 -4.533 53.195 30.109 C.2 1 PGD 0.000 39 C17 -3.440 54.007 30.432 C.2 1 PGD 0.000 40 O17 -2.525 53.603 31.135 O.2 1 PGD 0.000 41 N18 -3.392 55.289 29.972 N.2 1 PGD 0.000 42 C19 -4.382 55.799 29.199 C.cat 1 PGD 0.000 43 N19 -4.335 57.136 28.730 N.pl3 1 PGD 0.000 44 N20 -5.446 55.027 28.866 N.2 1 PGD 0.000 45 C21 -5.533 53.745 29.318 C.2 1 PGD 0.000 46 N22 -6.684 52.986 28.925 N.am 1 PGD 0.000 47 C23 -6.971 51.727 29.595 C.3 1 PGD 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 9 1 5 4 6 1 6 5 6 1 7 5 29 1 8 6 7 2 9 6 8 1 10 9 10 1 11 10 11 1 12 11 12 1 13 11 13 1 14 12 17 1 15 13 14 1 16 13 15 1 17 15 16 1 18 15 17 1 19 17 18 1 20 18 19 ar 21 18 28 ar 22 19 20 ar 23 20 21 ar 24 21 22 1 25 21 28 ar 26 22 23 2 27 22 24 1 28 24 25 1 29 25 26 1 30 25 27 2 31 27 28 1 32 29 30 1 33 30 31 1 34 30 32 1 35 31 47 1 36 32 33 1 37 32 34 2 38 34 35 1 39 34 36 1 40 36 37 1 41 36 47 1 42 37 38 2 43 38 39 1 44 38 45 1 45 39 40 2 46 39 41 1 47 41 42 2 48 42 43 1 49 42 44 1 50 44 45 2 51 45 46 1 52 46 47 1 @SUBSTRUCTURE 1 PGD 1