data_1DOD # _model_server_result.job_id MFqpdQ3aKpleGGYQS5G-UQ _model_server_result.datetime_utc '2024-10-19 15:38:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dod # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":396}' # _entry.id 1DOD # _exptl.entry_id 1DOD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2,4-DIHYDROXYBENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DOD _cell.length_a 71.9 _cell.length_b 146.44 _cell.length_c 88.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DOD _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 146.44 88.25 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H6 O4' _chem_comp.formula_weight 154.12 _chem_comp.id DOB _chem_comp.mon_nstd_flag . _chem_comp.name '2,4-DIHYDROXYBENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' DOB doub 83 n n C1' O2' DOB sing 84 n n C1' C1 DOB sing 85 n n O2' HO2' DOB sing 86 n n C1 C2 DOB sing 87 n y C1 C6 DOB doub 88 n y C2 C3 DOB doub 89 n y C2 O2 DOB sing 90 n n C3 C4 DOB sing 91 n y C3 H3 DOB sing 92 n n C4 C5 DOB doub 93 n y C4 O4 DOB sing 94 n n C5 C6 DOB sing 95 n y C5 H5 DOB sing 96 n n C6 H6 DOB sing 97 n n O2 HO2 DOB sing 98 n n O4 HO4 DOB sing 99 n n # _atom_sites.entry_id 1DOD _atom_sites.fract_transf_matrix[1][1] 0.013908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 395 395 FAD FAD . C 3 DOB A 1 396 396 DOB DOB . D 4 HOH A 1 399 399 HOH HOH . D 4 HOH A 2 400 400 HOH HOH . D 4 HOH A 3 401 401 HOH HOH . D 4 HOH A 4 402 402 HOH HOH . D 4 HOH A 5 403 403 HOH HOH . D 4 HOH A 6 404 404 HOH HOH . D 4 HOH A 7 405 405 HOH HOH . D 4 HOH A 8 406 406 HOH HOH . D 4 HOH A 9 407 407 HOH HOH . D 4 HOH A 10 408 408 HOH HOH . D 4 HOH A 11 409 409 HOH HOH . D 4 HOH A 12 410 410 HOH HOH . D 4 HOH A 13 411 411 HOH HOH . D 4 HOH A 14 412 412 HOH HOH . D 4 HOH A 15 413 413 HOH HOH . D 4 HOH A 16 414 414 HOH HOH . D 4 HOH A 17 415 415 HOH HOH . D 4 HOH A 18 416 416 HOH HOH . D 4 HOH A 19 417 417 HOH HOH . D 4 HOH A 20 418 418 HOH HOH . D 4 HOH A 21 419 419 HOH HOH . D 4 HOH A 22 420 420 HOH HOH . D 4 HOH A 23 422 422 HOH HOH . D 4 HOH A 24 423 423 HOH HOH . D 4 HOH A 25 424 424 HOH HOH . D 4 HOH A 26 425 425 HOH HOH . D 4 HOH A 27 426 426 HOH HOH . D 4 HOH A 28 427 427 HOH HOH . D 4 HOH A 29 428 428 HOH HOH . D 4 HOH A 30 429 429 HOH HOH . D 4 HOH A 31 430 430 HOH HOH . D 4 HOH A 32 431 431 HOH HOH . D 4 HOH A 33 432 432 HOH HOH . D 4 HOH A 34 433 433 HOH HOH . D 4 HOH A 35 434 434 HOH HOH . D 4 HOH A 36 435 435 HOH HOH . D 4 HOH A 37 436 436 HOH HOH . D 4 HOH A 38 437 437 HOH HOH . D 4 HOH A 39 438 438 HOH HOH . D 4 HOH A 40 440 440 HOH HOH . D 4 HOH A 41 441 441 HOH HOH . D 4 HOH A 42 443 443 HOH HOH . D 4 HOH A 43 444 444 HOH HOH . D 4 HOH A 44 445 445 HOH HOH . D 4 HOH A 45 446 446 HOH HOH . D 4 HOH A 46 448 448 HOH HOH . D 4 HOH A 47 449 449 HOH HOH . D 4 HOH A 48 451 451 HOH HOH . D 4 HOH A 49 452 452 HOH HOH . D 4 HOH A 50 454 454 HOH HOH . D 4 HOH A 51 455 455 HOH HOH . D 4 HOH A 52 456 456 HOH HOH . D 4 HOH A 53 459 459 HOH HOH . D 4 HOH A 54 460 460 HOH HOH . D 4 HOH A 55 461 461 HOH HOH . D 4 HOH A 56 462 462 HOH HOH . D 4 HOH A 57 464 464 HOH HOH . D 4 HOH A 58 465 465 HOH HOH . D 4 HOH A 59 467 467 HOH HOH . D 4 HOH A 60 468 468 HOH HOH . D 4 HOH A 61 469 469 HOH HOH . D 4 HOH A 62 471 471 HOH HOH . D 4 HOH A 63 472 472 HOH HOH . D 4 HOH A 64 473 473 HOH HOH . D 4 HOH A 65 474 474 HOH HOH . D 4 HOH A 66 475 475 HOH HOH . D 4 HOH A 67 476 476 HOH HOH . D 4 HOH A 68 477 477 HOH HOH . D 4 HOH A 69 478 478 HOH HOH . D 4 HOH A 70 479 479 HOH HOH . D 4 HOH A 71 480 480 HOH HOH . D 4 HOH A 72 481 481 HOH HOH . D 4 HOH A 73 482 482 HOH HOH . D 4 HOH A 74 483 483 HOH HOH . D 4 HOH A 75 484 484 HOH HOH . D 4 HOH A 76 485 485 HOH HOH . D 4 HOH A 77 486 486 HOH HOH . D 4 HOH A 78 488 488 HOH HOH . D 4 HOH A 79 489 489 HOH HOH . D 4 HOH A 80 490 490 HOH HOH . D 4 HOH A 81 491 491 HOH HOH . D 4 HOH A 82 492 492 HOH HOH . D 4 HOH A 83 493 493 HOH HOH . D 4 HOH A 84 494 494 HOH HOH . D 4 HOH A 85 495 495 HOH HOH . D 4 HOH A 86 496 496 HOH HOH . D 4 HOH A 87 497 497 HOH HOH . D 4 HOH A 88 498 498 HOH HOH . D 4 HOH A 89 499 499 HOH HOH . D 4 HOH A 90 500 500 HOH HOH . D 4 HOH A 91 501 501 HOH HOH . D 4 HOH A 92 502 502 HOH HOH . D 4 HOH A 93 503 503 HOH HOH . D 4 HOH A 94 505 505 HOH HOH . D 4 HOH A 95 506 506 HOH HOH . D 4 HOH A 96 507 507 HOH HOH . D 4 HOH A 97 509 509 HOH HOH . D 4 HOH A 98 510 510 HOH HOH . D 4 HOH A 99 511 511 HOH HOH . D 4 HOH A 100 512 512 HOH HOH . D 4 HOH A 101 513 513 HOH HOH . D 4 HOH A 102 514 514 HOH HOH . D 4 HOH A 103 515 515 HOH HOH . D 4 HOH A 104 516 516 HOH HOH . D 4 HOH A 105 517 517 HOH HOH . D 4 HOH A 106 518 518 HOH HOH . D 4 HOH A 107 519 519 HOH HOH . D 4 HOH A 108 520 520 HOH HOH . D 4 HOH A 109 521 521 HOH HOH . D 4 HOH A 110 522 522 HOH HOH . D 4 HOH A 111 523 523 HOH HOH . D 4 HOH A 112 524 524 HOH HOH . D 4 HOH A 113 525 525 HOH HOH . D 4 HOH A 114 526 526 HOH HOH . D 4 HOH A 115 527 527 HOH HOH . D 4 HOH A 116 528 528 HOH HOH . D 4 HOH A 117 529 529 HOH HOH . D 4 HOH A 118 530 530 HOH HOH . D 4 HOH A 119 532 532 HOH HOH . D 4 HOH A 120 533 533 HOH HOH . D 4 HOH A 121 535 535 HOH HOH . D 4 HOH A 122 537 537 HOH HOH . D 4 HOH A 123 538 538 HOH HOH . D 4 HOH A 124 540 540 HOH HOH . D 4 HOH A 125 541 541 HOH HOH . D 4 HOH A 126 543 543 HOH HOH . D 4 HOH A 127 544 544 HOH HOH . D 4 HOH A 128 545 545 HOH HOH . D 4 HOH A 129 546 546 HOH HOH . D 4 HOH A 130 547 547 HOH HOH . D 4 HOH A 131 548 548 HOH HOH . D 4 HOH A 132 549 549 HOH HOH . D 4 HOH A 133 551 551 HOH HOH . D 4 HOH A 134 552 552 HOH HOH . D 4 HOH A 135 553 553 HOH HOH . D 4 HOH A 136 556 556 HOH HOH . D 4 HOH A 137 558 558 HOH HOH . D 4 HOH A 138 559 559 HOH HOH . D 4 HOH A 139 561 561 HOH HOH . D 4 HOH A 140 562 562 HOH HOH . D 4 HOH A 141 563 563 HOH HOH . D 4 HOH A 142 564 564 HOH HOH . D 4 HOH A 143 565 565 HOH HOH . D 4 HOH A 144 566 566 HOH HOH . D 4 HOH A 145 569 569 HOH HOH . D 4 HOH A 146 570 570 HOH HOH . D 4 HOH A 147 571 571 HOH HOH . D 4 HOH A 148 572 572 HOH HOH . D 4 HOH A 149 573 573 HOH HOH . D 4 HOH A 150 574 574 HOH HOH . D 4 HOH A 151 575 575 HOH HOH . D 4 HOH A 152 576 576 HOH HOH . D 4 HOH A 153 578 578 HOH HOH . D 4 HOH A 154 580 580 HOH HOH . D 4 HOH A 155 581 581 HOH HOH . D 4 HOH A 156 582 582 HOH HOH . D 4 HOH A 157 583 583 HOH HOH . D 4 HOH A 158 584 584 HOH HOH . D 4 HOH A 159 585 585 HOH HOH . D 4 HOH A 160 586 586 HOH HOH . D 4 HOH A 161 587 587 HOH HOH . D 4 HOH A 162 588 588 HOH HOH . D 4 HOH A 163 589 589 HOH HOH . D 4 HOH A 164 590 590 HOH HOH . D 4 HOH A 165 591 591 HOH HOH . D 4 HOH A 166 593 593 HOH HOH . D 4 HOH A 167 594 594 HOH HOH . D 4 HOH A 168 595 595 HOH HOH . D 4 HOH A 169 596 596 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' DOB . . . C 3 17.205 96.843 45.676 1 11.04 ? C1' DOB 396 A 1 HETATM 2 O O1' DOB . . . C 3 18.014 97.519 46.294 1 11.6 ? O1' DOB 396 A 1 HETATM 3 O O2' DOB . . . C 3 16.228 97.45 45.261 1 7.95 ? O2' DOB 396 A 1 HETATM 4 C C1 DOB . . . C 3 17.326 95.447 45.546 1 8.45 ? C1 DOB 396 A 1 HETATM 5 C C2 DOB . . . C 3 18.374 94.742 46.098 1 6.95 ? C2 DOB 396 A 1 HETATM 6 C C3 DOB . . . C 3 18.417 93.341 46.169 1 4.01 ? C3 DOB 396 A 1 HETATM 7 C C4 DOB . . . C 3 17.351 92.631 45.657 1 6.88 ? C4 DOB 396 A 1 HETATM 8 C C5 DOB . . . C 3 16.259 93.274 45.09 1 7.15 ? C5 DOB 396 A 1 HETATM 9 C C6 DOB . . . C 3 16.265 94.688 45.039 1 8.24 ? C6 DOB 396 A 1 HETATM 10 O O2 DOB . . . C 3 19.413 95.383 46.68 1 13.21 ? O2 DOB 396 A 1 HETATM 11 O O4 DOB . . . C 3 17.408 91.296 45.55 1 6.2 ? O4 DOB 396 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #