data_1DOE # _model_server_result.job_id xeZ9yNPP3pjMcLy4a3a-fg _model_server_result.datetime_utc '2025-03-04 17:11:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1doe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":396}' # _entry.id 1DOE # _exptl.entry_id 1DOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2,4-DIHYDROXYBENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DOE _cell.length_a 71.9 _cell.length_b 146.44 _cell.length_c 88.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 146.44 88.25 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H6 O4' _chem_comp.formula_weight 154.12 _chem_comp.id DOB _chem_comp.mon_nstd_flag . _chem_comp.name '2,4-DIHYDROXYBENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' DOB doub 83 n n C1' O2' DOB sing 84 n n C1' C1 DOB sing 85 n n O2' HO2' DOB sing 86 n n C1 C2 DOB sing 87 n y C1 C6 DOB doub 88 n y C2 C3 DOB doub 89 n y C2 O2 DOB sing 90 n n C3 C4 DOB sing 91 n y C3 H3 DOB sing 92 n n C4 C5 DOB doub 93 n y C4 O4 DOB sing 94 n n C5 C6 DOB sing 95 n y C5 H5 DOB sing 96 n n C6 H6 DOB sing 97 n n O2 HO2 DOB sing 98 n n O4 HO4 DOB sing 99 n n # _atom_sites.entry_id 1DOE _atom_sites.fract_transf_matrix[1][1] 0.013908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR A 1 397 397 BR BR . C 2 BR A 1 398 398 BR BR . D 3 FAD A 1 395 395 FAD FAD . E 4 DOB A 1 396 396 DOB DOB . F 5 HOH A 1 399 399 HOH HOH . F 5 HOH A 2 400 400 HOH HOH . F 5 HOH A 3 401 401 HOH HOH . F 5 HOH A 4 402 402 HOH HOH . F 5 HOH A 5 403 403 HOH HOH . F 5 HOH A 6 404 404 HOH HOH . F 5 HOH A 7 405 405 HOH HOH . F 5 HOH A 8 406 406 HOH HOH . F 5 HOH A 9 407 407 HOH HOH . F 5 HOH A 10 408 408 HOH HOH . F 5 HOH A 11 409 409 HOH HOH . F 5 HOH A 12 410 410 HOH HOH . F 5 HOH A 13 411 411 HOH HOH . F 5 HOH A 14 412 412 HOH HOH . F 5 HOH A 15 413 413 HOH HOH . F 5 HOH A 16 414 414 HOH HOH . F 5 HOH A 17 415 415 HOH HOH . F 5 HOH A 18 416 416 HOH HOH . F 5 HOH A 19 417 417 HOH HOH . F 5 HOH A 20 418 418 HOH HOH . F 5 HOH A 21 419 419 HOH HOH . F 5 HOH A 22 420 420 HOH HOH . F 5 HOH A 23 421 421 HOH HOH . F 5 HOH A 24 422 422 HOH HOH . F 5 HOH A 25 424 424 HOH HOH . F 5 HOH A 26 425 425 HOH HOH . F 5 HOH A 27 427 427 HOH HOH . F 5 HOH A 28 428 428 HOH HOH . F 5 HOH A 29 429 429 HOH HOH . F 5 HOH A 30 430 430 HOH HOH . F 5 HOH A 31 431 431 HOH HOH . F 5 HOH A 32 432 432 HOH HOH . F 5 HOH A 33 433 433 HOH HOH . F 5 HOH A 34 434 434 HOH HOH . F 5 HOH A 35 436 436 HOH HOH . F 5 HOH A 36 437 437 HOH HOH . F 5 HOH A 37 438 438 HOH HOH . F 5 HOH A 38 440 440 HOH HOH . F 5 HOH A 39 441 441 HOH HOH . F 5 HOH A 40 443 443 HOH HOH . F 5 HOH A 41 444 444 HOH HOH . F 5 HOH A 42 445 445 HOH HOH . F 5 HOH A 43 446 446 HOH HOH . F 5 HOH A 44 448 448 HOH HOH . F 5 HOH A 45 449 449 HOH HOH . F 5 HOH A 46 452 452 HOH HOH . F 5 HOH A 47 454 454 HOH HOH . F 5 HOH A 48 455 455 HOH HOH . F 5 HOH A 49 456 456 HOH HOH . F 5 HOH A 50 459 459 HOH HOH . F 5 HOH A 51 460 460 HOH HOH . F 5 HOH A 52 461 461 HOH HOH . F 5 HOH A 53 462 462 HOH HOH . F 5 HOH A 54 464 464 HOH HOH . F 5 HOH A 55 465 465 HOH HOH . F 5 HOH A 56 468 468 HOH HOH . F 5 HOH A 57 469 469 HOH HOH . F 5 HOH A 58 471 471 HOH HOH . F 5 HOH A 59 472 472 HOH HOH . F 5 HOH A 60 473 473 HOH HOH . F 5 HOH A 61 474 474 HOH HOH . F 5 HOH A 62 475 475 HOH HOH . F 5 HOH A 63 476 476 HOH HOH . F 5 HOH A 64 477 477 HOH HOH . F 5 HOH A 65 478 478 HOH HOH . F 5 HOH A 66 479 479 HOH HOH . F 5 HOH A 67 480 480 HOH HOH . F 5 HOH A 68 481 481 HOH HOH . F 5 HOH A 69 482 482 HOH HOH . F 5 HOH A 70 483 483 HOH HOH . F 5 HOH A 71 484 484 HOH HOH . F 5 HOH A 72 485 485 HOH HOH . F 5 HOH A 73 486 486 HOH HOH . F 5 HOH A 74 488 488 HOH HOH . F 5 HOH A 75 489 489 HOH HOH . F 5 HOH A 76 490 490 HOH HOH . F 5 HOH A 77 491 491 HOH HOH . F 5 HOH A 78 493 493 HOH HOH . F 5 HOH A 79 494 494 HOH HOH . F 5 HOH A 80 495 495 HOH HOH . F 5 HOH A 81 496 496 HOH HOH . F 5 HOH A 82 497 497 HOH HOH . F 5 HOH A 83 498 498 HOH HOH . F 5 HOH A 84 500 500 HOH HOH . F 5 HOH A 85 501 501 HOH HOH . F 5 HOH A 86 502 502 HOH HOH . F 5 HOH A 87 505 505 HOH HOH . F 5 HOH A 88 506 506 HOH HOH . F 5 HOH A 89 507 507 HOH HOH . F 5 HOH A 90 509 509 HOH HOH . F 5 HOH A 91 510 510 HOH HOH . F 5 HOH A 92 511 511 HOH HOH . F 5 HOH A 93 512 512 HOH HOH . F 5 HOH A 94 513 513 HOH HOH . F 5 HOH A 95 514 514 HOH HOH . F 5 HOH A 96 515 515 HOH HOH . F 5 HOH A 97 516 516 HOH HOH . F 5 HOH A 98 517 517 HOH HOH . F 5 HOH A 99 518 518 HOH HOH . F 5 HOH A 100 519 519 HOH HOH . F 5 HOH A 101 520 520 HOH HOH . F 5 HOH A 102 521 521 HOH HOH . F 5 HOH A 103 522 522 HOH HOH . F 5 HOH A 104 523 523 HOH HOH . F 5 HOH A 105 524 524 HOH HOH . F 5 HOH A 106 525 525 HOH HOH . F 5 HOH A 107 527 527 HOH HOH . F 5 HOH A 108 530 530 HOH HOH . F 5 HOH A 109 532 532 HOH HOH . F 5 HOH A 110 533 533 HOH HOH . F 5 HOH A 111 534 534 HOH HOH . F 5 HOH A 112 535 535 HOH HOH . F 5 HOH A 113 537 537 HOH HOH . F 5 HOH A 114 538 538 HOH HOH . F 5 HOH A 115 540 540 HOH HOH . F 5 HOH A 116 543 543 HOH HOH . F 5 HOH A 117 544 544 HOH HOH . F 5 HOH A 118 545 545 HOH HOH . F 5 HOH A 119 546 546 HOH HOH . F 5 HOH A 120 547 547 HOH HOH . F 5 HOH A 121 549 549 HOH HOH . F 5 HOH A 122 551 551 HOH HOH . F 5 HOH A 123 552 552 HOH HOH . F 5 HOH A 124 553 553 HOH HOH . F 5 HOH A 125 556 556 HOH HOH . F 5 HOH A 126 558 558 HOH HOH . F 5 HOH A 127 559 559 HOH HOH . F 5 HOH A 128 561 561 HOH HOH . F 5 HOH A 129 563 563 HOH HOH . F 5 HOH A 130 564 564 HOH HOH . F 5 HOH A 131 566 566 HOH HOH . F 5 HOH A 132 569 569 HOH HOH . F 5 HOH A 133 571 571 HOH HOH . F 5 HOH A 134 572 572 HOH HOH . F 5 HOH A 135 573 573 HOH HOH . F 5 HOH A 136 574 574 HOH HOH . F 5 HOH A 137 576 576 HOH HOH . F 5 HOH A 138 578 578 HOH HOH . F 5 HOH A 139 580 580 HOH HOH . F 5 HOH A 140 581 581 HOH HOH . F 5 HOH A 141 583 583 HOH HOH . F 5 HOH A 142 585 585 HOH HOH . F 5 HOH A 143 586 586 HOH HOH . F 5 HOH A 144 587 587 HOH HOH . F 5 HOH A 145 588 588 HOH HOH . F 5 HOH A 146 589 589 HOH HOH . F 5 HOH A 147 590 590 HOH HOH . F 5 HOH A 148 591 591 HOH HOH . F 5 HOH A 149 593 593 HOH HOH . F 5 HOH A 150 595 595 HOH HOH . F 5 HOH A 151 596 596 HOH HOH . F 5 HOH A 152 597 597 HOH HOH . F 5 HOH A 153 599 599 HOH HOH . F 5 HOH A 154 600 600 HOH HOH . F 5 HOH A 155 603 603 HOH HOH . F 5 HOH A 156 604 604 HOH HOH . F 5 HOH A 157 606 606 HOH HOH . F 5 HOH A 158 607 607 HOH HOH . F 5 HOH A 159 608 608 HOH HOH . F 5 HOH A 160 609 609 HOH HOH . F 5 HOH A 161 612 612 HOH HOH . F 5 HOH A 162 613 613 HOH HOH . F 5 HOH A 163 615 615 HOH HOH . F 5 HOH A 164 616 616 HOH HOH . F 5 HOH A 165 617 617 HOH HOH . F 5 HOH A 166 618 618 HOH HOH . F 5 HOH A 167 619 619 HOH HOH . F 5 HOH A 168 620 620 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' DOB . . . E 4 17.282 96.735 45.746 1 9.06 ? C1' DOB 396 A 1 HETATM 2 O O1' DOB . . . E 4 18.187 97.399 46.244 1 7.02 ? O1' DOB 396 A 1 HETATM 3 O O2' DOB . . . E 4 16.306 97.356 45.381 1 6.66 ? O2' DOB 396 A 1 HETATM 4 C C1 DOB . . . E 4 17.319 95.349 45.668 1 10.46 ? C1 DOB 396 A 1 HETATM 5 C C2 DOB . . . E 4 18.372 94.606 46.177 1 10.7 ? C2 DOB 396 A 1 HETATM 6 C C3 DOB . . . E 4 18.379 93.209 46.111 1 12.45 ? C3 DOB 396 A 1 HETATM 7 C C4 DOB . . . E 4 17.318 92.52 45.549 1 10.7 ? C4 DOB 396 A 1 HETATM 8 C C5 DOB . . . E 4 16.232 93.203 45.019 1 12.61 ? C5 DOB 396 A 1 HETATM 9 C C6 DOB . . . E 4 16.258 94.611 45.087 1 16.56 ? C6 DOB 396 A 1 HETATM 10 O O2 DOB . . . E 4 19.421 95.19 46.841 1 18.93 ? O2 DOB 396 A 1 HETATM 11 O O4 DOB . . . E 4 17.329 91.173 45.543 1 10.86 ? O4 DOB 396 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #