data_1DOK # _model_server_result.job_id XHUOjVvYbsiv0j6DIyWEFg _model_server_result.datetime_utc '2024-10-24 04:34:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 1DOK # _exptl.entry_id 1DOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DOK _cell.length_a 50.74 _cell.length_b 50.74 _cell.length_c 107.65 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 50.74 50.74 53.825 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 11 1_555 A SG CYS 37 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 13 A CYS 12 1_555 A SG CYS 53 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 12 B CYS 11 1_555 B SG CYS 37 B CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 13 B CYS 12 1_555 B SG CYS 53 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 281 n n S O2 SO4 doub 282 n n S O3 SO4 sing 283 n n S O4 SO4 sing 284 n n # _atom_sites.entry_id 1DOK _atom_sites.fract_transf_matrix[1][1] 0.019708 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 402 402 SO4 SO4 . D 2 SO4 B 1 401 401 SO4 SO4 . E 3 HOH A 1 201 201 HOH HOH . E 3 HOH A 2 204 204 HOH HOH . E 3 HOH A 3 205 205 HOH HOH . E 3 HOH A 4 207 207 HOH HOH . E 3 HOH A 5 209 209 HOH HOH . E 3 HOH A 6 210 210 HOH HOH . E 3 HOH A 7 211 211 HOH HOH . E 3 HOH A 8 212 212 HOH HOH . E 3 HOH A 9 213 213 HOH HOH . E 3 HOH A 10 214 214 HOH HOH . E 3 HOH A 11 215 215 HOH HOH . E 3 HOH A 12 216 216 HOH HOH . E 3 HOH A 13 217 217 HOH HOH . E 3 HOH A 14 218 218 HOH HOH . E 3 HOH A 15 221 221 HOH HOH . E 3 HOH A 16 242 242 HOH HOH . E 3 HOH A 17 244 244 HOH HOH . E 3 HOH A 18 246 246 HOH HOH . E 3 HOH A 19 247 247 HOH HOH . E 3 HOH A 20 248 248 HOH HOH . E 3 HOH A 21 249 249 HOH HOH . E 3 HOH A 22 250 250 HOH HOH . E 3 HOH A 23 251 251 HOH HOH . E 3 HOH A 24 252 252 HOH HOH . E 3 HOH A 25 253 253 HOH HOH . E 3 HOH A 26 254 254 HOH HOH . E 3 HOH A 27 255 255 HOH HOH . E 3 HOH A 28 256 256 HOH HOH . E 3 HOH A 29 257 257 HOH HOH . E 3 HOH A 30 270 270 HOH HOH . E 3 HOH A 31 271 271 HOH HOH . E 3 HOH A 32 272 272 HOH HOH . E 3 HOH A 33 273 273 HOH HOH . E 3 HOH A 34 274 274 HOH HOH . E 3 HOH A 35 275 275 HOH HOH . E 3 HOH A 36 276 276 HOH HOH . E 3 HOH A 37 277 277 HOH HOH . E 3 HOH A 38 278 278 HOH HOH . E 3 HOH A 39 279 279 HOH HOH . E 3 HOH A 40 284 284 HOH HOH . E 3 HOH A 41 285 285 HOH HOH . E 3 HOH A 42 286 286 HOH HOH . E 3 HOH A 43 295 295 HOH HOH . E 3 HOH A 44 296 296 HOH HOH . E 3 HOH A 45 300 300 HOH HOH . E 3 HOH A 46 304 304 HOH HOH . E 3 HOH A 47 306 306 HOH HOH . E 3 HOH A 48 307 307 HOH HOH . E 3 HOH A 49 308 308 HOH HOH . E 3 HOH A 50 309 309 HOH HOH . E 3 HOH A 51 313 313 HOH HOH . E 3 HOH A 52 316 316 HOH HOH . F 3 HOH B 1 202 202 HOH HOH . F 3 HOH B 2 203 203 HOH HOH . F 3 HOH B 3 206 206 HOH HOH . F 3 HOH B 4 208 208 HOH HOH . F 3 HOH B 5 219 219 HOH HOH . F 3 HOH B 6 220 220 HOH HOH . F 3 HOH B 7 222 222 HOH HOH . F 3 HOH B 8 223 223 HOH HOH . F 3 HOH B 9 224 224 HOH HOH . F 3 HOH B 10 225 225 HOH HOH . F 3 HOH B 11 226 226 HOH HOH . F 3 HOH B 12 227 227 HOH HOH . F 3 HOH B 13 228 228 HOH HOH . F 3 HOH B 14 229 229 HOH HOH . F 3 HOH B 15 230 230 HOH HOH . F 3 HOH B 16 231 231 HOH HOH . F 3 HOH B 17 232 232 HOH HOH . F 3 HOH B 18 233 233 HOH HOH . F 3 HOH B 19 234 234 HOH HOH . F 3 HOH B 20 235 235 HOH HOH . F 3 HOH B 21 236 236 HOH HOH . F 3 HOH B 22 237 237 HOH HOH . F 3 HOH B 23 238 238 HOH HOH . F 3 HOH B 24 239 239 HOH HOH . F 3 HOH B 25 240 240 HOH HOH . F 3 HOH B 26 241 241 HOH HOH . F 3 HOH B 27 243 243 HOH HOH . F 3 HOH B 28 245 245 HOH HOH . F 3 HOH B 29 258 258 HOH HOH . F 3 HOH B 30 259 259 HOH HOH . F 3 HOH B 31 260 260 HOH HOH . F 3 HOH B 32 261 261 HOH HOH . F 3 HOH B 33 262 262 HOH HOH . F 3 HOH B 34 263 263 HOH HOH . F 3 HOH B 35 264 264 HOH HOH . F 3 HOH B 36 265 265 HOH HOH . F 3 HOH B 37 266 266 HOH HOH . F 3 HOH B 38 267 267 HOH HOH . F 3 HOH B 39 268 268 HOH HOH . F 3 HOH B 40 269 269 HOH HOH . F 3 HOH B 41 280 280 HOH HOH . F 3 HOH B 42 281 281 HOH HOH . F 3 HOH B 43 282 282 HOH HOH . F 3 HOH B 44 283 283 HOH HOH . F 3 HOH B 45 287 287 HOH HOH . F 3 HOH B 46 288 288 HOH HOH . F 3 HOH B 47 289 289 HOH HOH . F 3 HOH B 48 290 290 HOH HOH . F 3 HOH B 49 291 291 HOH HOH . F 3 HOH B 50 292 292 HOH HOH . F 3 HOH B 51 293 293 HOH HOH . F 3 HOH B 52 294 294 HOH HOH . F 3 HOH B 53 297 297 HOH HOH . F 3 HOH B 54 298 298 HOH HOH . F 3 HOH B 55 299 299 HOH HOH . F 3 HOH B 56 301 301 HOH HOH . F 3 HOH B 57 302 302 HOH HOH . F 3 HOH B 58 303 303 HOH HOH . F 3 HOH B 59 305 305 HOH HOH . F 3 HOH B 60 310 310 HOH HOH . F 3 HOH B 61 311 311 HOH HOH . F 3 HOH B 62 312 312 HOH HOH . F 3 HOH B 63 314 314 HOH HOH . F 3 HOH B 64 315 315 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 16.521 34.397 26.31 0.5 77.74 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . C 2 16.893 35.661 25.762 0.5 76.44 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . C 2 15.594 34.585 27.387 0.5 76.65 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . C 2 15.918 33.596 25.292 0.5 76.95 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . C 2 17.687 33.739 26.802 0.5 77.39 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #