data_1DS4 # _model_server_result.job_id GsjacMgTkj8scohk_Tdj7A _model_server_result.datetime_utc '2024-11-18 11:26:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ds4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1500}' # _entry.id 1DS4 # _exptl.entry_id 1DS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DS4 _cell.length_a 106.9 _cell.length_b 74.95 _cell.length_c 50.73 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id FE _struct_conn.ptnr1_label_comp_id HEM _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HEM _struct_conn.ptnr1_auth_seq_id 1001 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id N3 _struct_conn.ptnr2_label_comp_id IMD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id IMD _struct_conn.ptnr2_auth_seq_id 1500 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.304 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 255 n y N1 C5 IMD sing 256 n y N1 HN1 IMD sing 257 n n C2 N3 IMD doub 258 n y C2 H2 IMD sing 259 n n N3 C4 IMD sing 260 n y N3 HN3 IMD sing 261 n n C4 C5 IMD doub 262 n y C4 H4 IMD sing 263 n n C5 H5 IMD sing 264 n n # _atom_sites.entry_id 1DS4 _atom_sites.fract_transf_matrix[1][1] 0.009355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013342 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 1001 1 HEM HEM . C 3 IMD A 1 1500 2 IMD IMD . D 4 HOH A 1 300 300 HOH HOH . D 4 HOH A 2 301 301 HOH HOH . D 4 HOH A 3 302 302 HOH HOH . D 4 HOH A 4 304 304 HOH HOH . D 4 HOH A 5 305 305 HOH HOH . D 4 HOH A 6 306 306 HOH HOH . D 4 HOH A 7 307 307 HOH HOH . D 4 HOH A 8 308 308 HOH HOH . D 4 HOH A 9 309 309 HOH HOH . D 4 HOH A 10 310 310 HOH HOH . D 4 HOH A 11 311 311 HOH HOH . D 4 HOH A 12 312 312 HOH HOH . D 4 HOH A 13 314 314 HOH HOH . D 4 HOH A 14 315 315 HOH HOH . D 4 HOH A 15 316 316 HOH HOH . D 4 HOH A 16 317 317 HOH HOH . D 4 HOH A 17 318 318 HOH HOH . D 4 HOH A 18 319 319 HOH HOH . D 4 HOH A 19 320 320 HOH HOH . D 4 HOH A 20 321 321 HOH HOH . D 4 HOH A 21 322 322 HOH HOH . D 4 HOH A 22 323 323 HOH HOH . D 4 HOH A 23 324 324 HOH HOH . D 4 HOH A 24 325 325 HOH HOH . D 4 HOH A 25 327 327 HOH HOH . D 4 HOH A 26 328 328 HOH HOH . D 4 HOH A 27 329 329 HOH HOH . D 4 HOH A 28 330 330 HOH HOH . D 4 HOH A 29 331 331 HOH HOH . D 4 HOH A 30 332 332 HOH HOH . D 4 HOH A 31 333 333 HOH HOH . D 4 HOH A 32 334 334 HOH HOH . D 4 HOH A 33 335 335 HOH HOH . D 4 HOH A 34 336 336 HOH HOH . D 4 HOH A 35 337 337 HOH HOH . D 4 HOH A 36 338 338 HOH HOH . D 4 HOH A 37 339 339 HOH HOH . D 4 HOH A 38 341 341 HOH HOH . D 4 HOH A 39 342 342 HOH HOH . D 4 HOH A 40 344 344 HOH HOH . D 4 HOH A 41 345 345 HOH HOH . D 4 HOH A 42 347 347 HOH HOH . D 4 HOH A 43 349 349 HOH HOH . D 4 HOH A 44 350 350 HOH HOH . D 4 HOH A 45 351 351 HOH HOH . D 4 HOH A 46 352 352 HOH HOH . D 4 HOH A 47 353 353 HOH HOH . D 4 HOH A 48 354 354 HOH HOH . D 4 HOH A 49 355 355 HOH HOH . D 4 HOH A 50 356 356 HOH HOH . D 4 HOH A 51 357 357 HOH HOH . D 4 HOH A 52 358 358 HOH HOH . D 4 HOH A 53 359 359 HOH HOH . D 4 HOH A 54 360 360 HOH HOH . D 4 HOH A 55 361 361 HOH HOH . D 4 HOH A 56 362 362 HOH HOH . D 4 HOH A 57 363 363 HOH HOH . D 4 HOH A 58 364 364 HOH HOH . D 4 HOH A 59 365 365 HOH HOH . D 4 HOH A 60 366 366 HOH HOH . D 4 HOH A 61 367 367 HOH HOH . D 4 HOH A 62 368 368 HOH HOH . D 4 HOH A 63 369 369 HOH HOH . D 4 HOH A 64 370 370 HOH HOH . D 4 HOH A 65 371 371 HOH HOH . D 4 HOH A 66 372 372 HOH HOH . D 4 HOH A 67 373 373 HOH HOH . D 4 HOH A 68 374 374 HOH HOH . D 4 HOH A 69 375 375 HOH HOH . D 4 HOH A 70 376 376 HOH HOH . D 4 HOH A 71 377 377 HOH HOH . D 4 HOH A 72 378 378 HOH HOH . D 4 HOH A 73 379 379 HOH HOH . D 4 HOH A 74 380 380 HOH HOH . D 4 HOH A 75 381 381 HOH HOH . D 4 HOH A 76 382 382 HOH HOH . D 4 HOH A 77 383 383 HOH HOH . D 4 HOH A 78 384 384 HOH HOH . D 4 HOH A 79 385 385 HOH HOH . D 4 HOH A 80 386 386 HOH HOH . D 4 HOH A 81 387 387 HOH HOH . D 4 HOH A 82 388 388 HOH HOH . D 4 HOH A 83 389 389 HOH HOH . D 4 HOH A 84 390 390 HOH HOH . D 4 HOH A 85 391 391 HOH HOH . D 4 HOH A 86 392 392 HOH HOH . D 4 HOH A 87 393 393 HOH HOH . D 4 HOH A 88 394 394 HOH HOH . D 4 HOH A 89 395 395 HOH HOH . D 4 HOH A 90 396 396 HOH HOH . D 4 HOH A 91 397 397 HOH HOH . D 4 HOH A 92 398 398 HOH HOH . D 4 HOH A 93 399 399 HOH HOH . D 4 HOH A 94 400 400 HOH HOH . D 4 HOH A 95 401 401 HOH HOH . D 4 HOH A 96 402 402 HOH HOH . D 4 HOH A 97 403 403 HOH HOH . D 4 HOH A 98 404 404 HOH HOH . D 4 HOH A 99 405 405 HOH HOH . D 4 HOH A 100 406 406 HOH HOH . D 4 HOH A 101 407 407 HOH HOH . D 4 HOH A 102 408 408 HOH HOH . D 4 HOH A 103 409 409 HOH HOH . D 4 HOH A 104 410 410 HOH HOH . D 4 HOH A 105 411 411 HOH HOH . D 4 HOH A 106 412 412 HOH HOH . D 4 HOH A 107 413 413 HOH HOH . D 4 HOH A 108 414 414 HOH HOH . D 4 HOH A 109 415 415 HOH HOH . D 4 HOH A 110 416 416 HOH HOH . D 4 HOH A 111 417 417 HOH HOH . D 4 HOH A 112 418 418 HOH HOH . D 4 HOH A 113 419 419 HOH HOH . D 4 HOH A 114 420 420 HOH HOH . D 4 HOH A 115 421 421 HOH HOH . D 4 HOH A 116 422 422 HOH HOH . D 4 HOH A 117 423 423 HOH HOH . D 4 HOH A 118 424 424 HOH HOH . D 4 HOH A 119 425 425 HOH HOH . D 4 HOH A 120 426 426 HOH HOH . D 4 HOH A 121 427 427 HOH HOH . D 4 HOH A 122 428 428 HOH HOH . D 4 HOH A 123 429 429 HOH HOH . D 4 HOH A 124 430 430 HOH HOH . D 4 HOH A 125 431 431 HOH HOH . D 4 HOH A 126 432 432 HOH HOH . D 4 HOH A 127 433 433 HOH HOH . D 4 HOH A 128 434 434 HOH HOH . D 4 HOH A 129 435 435 HOH HOH . D 4 HOH A 130 436 436 HOH HOH . D 4 HOH A 131 437 437 HOH HOH . D 4 HOH A 132 438 438 HOH HOH . D 4 HOH A 133 439 439 HOH HOH . D 4 HOH A 134 440 440 HOH HOH . D 4 HOH A 135 441 441 HOH HOH . D 4 HOH A 136 442 442 HOH HOH . D 4 HOH A 137 443 443 HOH HOH . D 4 HOH A 138 444 444 HOH HOH . D 4 HOH A 139 445 445 HOH HOH . D 4 HOH A 140 446 446 HOH HOH . D 4 HOH A 141 447 447 HOH HOH . D 4 HOH A 142 448 448 HOH HOH . D 4 HOH A 143 449 449 HOH HOH . D 4 HOH A 144 450 450 HOH HOH . D 4 HOH A 145 451 451 HOH HOH . D 4 HOH A 146 452 452 HOH HOH . D 4 HOH A 147 453 453 HOH HOH . D 4 HOH A 148 454 454 HOH HOH . D 4 HOH A 149 455 455 HOH HOH . D 4 HOH A 150 456 456 HOH HOH . D 4 HOH A 151 457 457 HOH HOH . D 4 HOH A 152 458 458 HOH HOH . D 4 HOH A 153 459 459 HOH HOH . D 4 HOH A 154 460 460 HOH HOH . D 4 HOH A 155 461 461 HOH HOH . D 4 HOH A 156 462 462 HOH HOH . D 4 HOH A 157 463 463 HOH HOH . D 4 HOH A 158 464 464 HOH HOH . D 4 HOH A 159 465 465 HOH HOH . D 4 HOH A 160 466 466 HOH HOH . D 4 HOH A 161 467 467 HOH HOH . D 4 HOH A 162 468 468 HOH HOH . D 4 HOH A 163 469 469 HOH HOH . D 4 HOH A 164 470 470 HOH HOH . D 4 HOH A 165 471 471 HOH HOH . D 4 HOH A 166 472 472 HOH HOH . D 4 HOH A 167 473 473 HOH HOH . D 4 HOH A 168 474 474 HOH HOH . D 4 HOH A 169 475 475 HOH HOH . D 4 HOH A 170 476 476 HOH HOH . D 4 HOH A 171 477 477 HOH HOH . D 4 HOH A 172 478 478 HOH HOH . D 4 HOH A 173 479 479 HOH HOH . D 4 HOH A 174 480 480 HOH HOH . D 4 HOH A 175 481 481 HOH HOH . D 4 HOH A 176 482 482 HOH HOH . D 4 HOH A 177 483 483 HOH HOH . D 4 HOH A 178 484 484 HOH HOH . D 4 HOH A 179 485 485 HOH HOH . D 4 HOH A 180 486 486 HOH HOH . D 4 HOH A 181 487 487 HOH HOH . D 4 HOH A 182 488 488 HOH HOH . D 4 HOH A 183 489 489 HOH HOH . D 4 HOH A 184 490 490 HOH HOH . D 4 HOH A 185 491 491 HOH HOH . D 4 HOH A 186 492 492 HOH HOH . D 4 HOH A 187 493 493 HOH HOH . D 4 HOH A 188 494 494 HOH HOH . D 4 HOH A 189 495 495 HOH HOH . D 4 HOH A 190 496 496 HOH HOH . D 4 HOH A 191 497 497 HOH HOH . D 4 HOH A 192 498 498 HOH HOH . D 4 HOH A 193 499 499 HOH HOH . D 4 HOH A 194 500 500 HOH HOH . D 4 HOH A 195 501 501 HOH HOH . D 4 HOH A 196 502 502 HOH HOH . D 4 HOH A 197 503 503 HOH HOH . D 4 HOH A 198 504 504 HOH HOH . D 4 HOH A 199 505 505 HOH HOH . D 4 HOH A 200 506 506 HOH HOH . D 4 HOH A 201 507 507 HOH HOH . D 4 HOH A 202 508 508 HOH HOH . D 4 HOH A 203 509 509 HOH HOH . D 4 HOH A 204 510 510 HOH HOH . D 4 HOH A 205 511 511 HOH HOH . D 4 HOH A 206 512 512 HOH HOH . D 4 HOH A 207 513 513 HOH HOH . D 4 HOH A 208 514 514 HOH HOH . D 4 HOH A 209 515 515 HOH HOH . D 4 HOH A 210 516 516 HOH HOH . D 4 HOH A 211 517 517 HOH HOH . D 4 HOH A 212 518 518 HOH HOH . D 4 HOH A 213 519 519 HOH HOH . D 4 HOH A 214 520 520 HOH HOH . D 4 HOH A 215 521 521 HOH HOH . D 4 HOH A 216 522 522 HOH HOH . D 4 HOH A 217 523 523 HOH HOH . D 4 HOH A 218 524 524 HOH HOH . D 4 HOH A 219 525 525 HOH HOH . D 4 HOH A 220 526 526 HOH HOH . D 4 HOH A 221 527 527 HOH HOH . D 4 HOH A 222 528 528 HOH HOH . D 4 HOH A 223 529 529 HOH HOH . D 4 HOH A 224 530 530 HOH HOH . D 4 HOH A 225 531 531 HOH HOH . D 4 HOH A 226 532 532 HOH HOH . D 4 HOH A 227 533 533 HOH HOH . D 4 HOH A 228 534 534 HOH HOH . D 4 HOH A 229 535 535 HOH HOH . D 4 HOH A 230 536 536 HOH HOH . D 4 HOH A 231 537 537 HOH HOH . D 4 HOH A 232 538 538 HOH HOH . D 4 HOH A 233 539 539 HOH HOH . D 4 HOH A 234 540 540 HOH HOH . D 4 HOH A 235 541 541 HOH HOH . D 4 HOH A 236 542 542 HOH HOH . D 4 HOH A 237 543 543 HOH HOH . D 4 HOH A 238 544 544 HOH HOH . D 4 HOH A 239 545 545 HOH HOH . D 4 HOH A 240 546 546 HOH HOH . D 4 HOH A 241 547 547 HOH HOH . D 4 HOH A 242 548 548 HOH HOH . D 4 HOH A 243 549 549 HOH HOH . D 4 HOH A 244 550 550 HOH HOH . D 4 HOH A 245 551 551 HOH HOH . D 4 HOH A 246 552 552 HOH HOH . D 4 HOH A 247 553 553 HOH HOH . D 4 HOH A 248 554 554 HOH HOH . D 4 HOH A 249 555 555 HOH HOH . D 4 HOH A 250 556 556 HOH HOH . D 4 HOH A 251 557 557 HOH HOH . D 4 HOH A 252 558 558 HOH HOH . D 4 HOH A 253 559 559 HOH HOH . D 4 HOH A 254 560 560 HOH HOH . D 4 HOH A 255 561 561 HOH HOH . D 4 HOH A 256 562 562 HOH HOH . D 4 HOH A 257 563 563 HOH HOH . D 4 HOH A 258 564 564 HOH HOH . D 4 HOH A 259 565 565 HOH HOH . D 4 HOH A 260 566 566 HOH HOH . D 4 HOH A 261 567 567 HOH HOH . D 4 HOH A 262 568 568 HOH HOH . D 4 HOH A 263 569 569 HOH HOH . D 4 HOH A 264 570 570 HOH HOH . D 4 HOH A 265 571 571 HOH HOH . D 4 HOH A 266 572 572 HOH HOH . D 4 HOH A 267 573 573 HOH HOH . D 4 HOH A 268 574 574 HOH HOH . D 4 HOH A 269 575 575 HOH HOH . D 4 HOH A 270 576 576 HOH HOH . D 4 HOH A 271 577 577 HOH HOH . D 4 HOH A 272 578 578 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . C 3 31.022 13.908 -0.257 1 19.01 ? N1 IMD 1500 A 1 HETATM 2 C C2 IMD . . . C 3 30.519 14.945 0.356 1 25.61 ? C2 IMD 1500 A 1 HETATM 3 N N3 IMD . . . C 3 29.278 15.078 -0.021 1 24.06 ? N3 IMD 1500 A 1 HETATM 4 C C4 IMD . . . C 3 28.992 14.128 -0.862 1 13.56 ? C4 IMD 1500 A 1 HETATM 5 C C5 IMD . . . C 3 30.13 13.363 -1.028 1 19.33 ? C5 IMD 1500 A 1 # _model_server_stats.io_time_ms 88 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #