data_1DS6 # _model_server_result.job_id tYeWZJbD4Thvy_bu1xCvLQ _model_server_result.datetime_utc '2024-12-20 03:48:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ds6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":193}' # _entry.id 1DS6 # _exptl.entry_id 1DS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DS6 _cell.length_a 53.026 _cell.length_b 61.922 _cell.length_c 141.068 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 17 A THR 17 1_555 C MG MG . A MG 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc2 A O THR 35 A THR 35 1_555 C MG MG . A MG 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc3 C MG MG . A MG 193 1_555 D O2B GDP . A GDP 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 C MG MG . A MG 193 1_555 E O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc5 C MG MG . A MG 193 1_555 E O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc6 C MG MG . A MG 193 1_555 E O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DS6 _atom_sites.fract_transf_matrix[1][1] 0.018859 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007089 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 193 192 MG MG . D 4 GDP A 1 194 191 GDP GDP . E 5 HOH A 1 501 501 HOH HOH . E 5 HOH A 2 502 502 HOH HOH . E 5 HOH A 3 503 503 HOH HOH . E 5 HOH A 4 504 504 HOH HOH . E 5 HOH A 5 506 506 HOH HOH . E 5 HOH A 6 509 509 HOH HOH . E 5 HOH A 7 511 511 HOH HOH . E 5 HOH A 8 512 512 HOH HOH . E 5 HOH A 9 514 514 HOH HOH . E 5 HOH A 10 515 515 HOH HOH . E 5 HOH A 11 516 516 HOH HOH . E 5 HOH A 12 517 517 HOH HOH . E 5 HOH A 13 518 518 HOH HOH . E 5 HOH A 14 520 520 HOH HOH . E 5 HOH A 15 522 522 HOH HOH . E 5 HOH A 16 526 526 HOH HOH . E 5 HOH A 17 528 528 HOH HOH . E 5 HOH A 18 529 529 HOH HOH . E 5 HOH A 19 531 531 HOH HOH . E 5 HOH A 20 533 533 HOH HOH . E 5 HOH A 21 536 536 HOH HOH . E 5 HOH A 22 539 539 HOH HOH . E 5 HOH A 23 540 540 HOH HOH . E 5 HOH A 24 541 541 HOH HOH . E 5 HOH A 25 546 546 HOH HOH . E 5 HOH A 26 547 547 HOH HOH . E 5 HOH A 27 549 549 HOH HOH . E 5 HOH A 28 550 550 HOH HOH . E 5 HOH A 29 551 551 HOH HOH . E 5 HOH A 30 552 552 HOH HOH . E 5 HOH A 31 554 554 HOH HOH . E 5 HOH A 32 556 556 HOH HOH . E 5 HOH A 33 557 557 HOH HOH . E 5 HOH A 34 559 559 HOH HOH . E 5 HOH A 35 561 561 HOH HOH . E 5 HOH A 36 562 562 HOH HOH . E 5 HOH A 37 564 564 HOH HOH . E 5 HOH A 38 567 567 HOH HOH . E 5 HOH A 39 568 568 HOH HOH . E 5 HOH A 40 570 570 HOH HOH . E 5 HOH A 41 571 571 HOH HOH . E 5 HOH A 42 572 572 HOH HOH . E 5 HOH A 43 573 573 HOH HOH . E 5 HOH A 44 575 575 HOH HOH . E 5 HOH A 45 576 576 HOH HOH . E 5 HOH A 46 578 578 HOH HOH . E 5 HOH A 47 579 579 HOH HOH . E 5 HOH A 48 583 583 HOH HOH . E 5 HOH A 49 584 584 HOH HOH . E 5 HOH A 50 585 585 HOH HOH . E 5 HOH A 51 589 589 HOH HOH . E 5 HOH A 52 591 591 HOH HOH . E 5 HOH A 53 592 592 HOH HOH . E 5 HOH A 54 593 593 HOH HOH . E 5 HOH A 55 594 594 HOH HOH . E 5 HOH A 56 596 596 HOH HOH . E 5 HOH A 57 599 599 HOH HOH . E 5 HOH A 58 600 600 HOH HOH . E 5 HOH A 59 602 602 HOH HOH . E 5 HOH A 60 605 605 HOH HOH . E 5 HOH A 61 606 606 HOH HOH . E 5 HOH A 62 607 607 HOH HOH . E 5 HOH A 63 616 616 HOH HOH . E 5 HOH A 64 617 617 HOH HOH . E 5 HOH A 65 619 619 HOH HOH . E 5 HOH A 66 621 621 HOH HOH . E 5 HOH A 67 622 622 HOH HOH . E 5 HOH A 68 623 623 HOH HOH . E 5 HOH A 69 625 625 HOH HOH . E 5 HOH A 70 626 626 HOH HOH . E 5 HOH A 71 627 627 HOH HOH . E 5 HOH A 72 628 628 HOH HOH . F 5 HOH B 1 505 505 HOH HOH . F 5 HOH B 2 507 507 HOH HOH . F 5 HOH B 3 508 508 HOH HOH . F 5 HOH B 4 510 510 HOH HOH . F 5 HOH B 5 513 513 HOH HOH . F 5 HOH B 6 519 519 HOH HOH . F 5 HOH B 7 521 521 HOH HOH . F 5 HOH B 8 523 523 HOH HOH . F 5 HOH B 9 524 524 HOH HOH . F 5 HOH B 10 525 525 HOH HOH . F 5 HOH B 11 527 527 HOH HOH . F 5 HOH B 12 530 530 HOH HOH . F 5 HOH B 13 532 532 HOH HOH . F 5 HOH B 14 534 534 HOH HOH . F 5 HOH B 15 535 535 HOH HOH . F 5 HOH B 16 537 537 HOH HOH . F 5 HOH B 17 538 538 HOH HOH . F 5 HOH B 18 542 542 HOH HOH . F 5 HOH B 19 543 543 HOH HOH . F 5 HOH B 20 544 544 HOH HOH . F 5 HOH B 21 545 545 HOH HOH . F 5 HOH B 22 548 548 HOH HOH . F 5 HOH B 23 553 553 HOH HOH . F 5 HOH B 24 555 555 HOH HOH . F 5 HOH B 25 558 558 HOH HOH . F 5 HOH B 26 560 560 HOH HOH . F 5 HOH B 27 563 563 HOH HOH . F 5 HOH B 28 565 565 HOH HOH . F 5 HOH B 29 566 566 HOH HOH . F 5 HOH B 30 569 569 HOH HOH . F 5 HOH B 31 574 574 HOH HOH . F 5 HOH B 32 577 577 HOH HOH . F 5 HOH B 33 580 580 HOH HOH . F 5 HOH B 34 581 581 HOH HOH . F 5 HOH B 35 582 582 HOH HOH . F 5 HOH B 36 586 586 HOH HOH . F 5 HOH B 37 587 587 HOH HOH . F 5 HOH B 38 588 588 HOH HOH . F 5 HOH B 39 590 590 HOH HOH . F 5 HOH B 40 595 595 HOH HOH . F 5 HOH B 41 597 597 HOH HOH . F 5 HOH B 42 598 598 HOH HOH . F 5 HOH B 43 601 601 HOH HOH . F 5 HOH B 44 603 603 HOH HOH . F 5 HOH B 45 604 604 HOH HOH . F 5 HOH B 46 608 608 HOH HOH . F 5 HOH B 47 609 609 HOH HOH . F 5 HOH B 48 610 610 HOH HOH . F 5 HOH B 49 611 611 HOH HOH . F 5 HOH B 50 612 612 HOH HOH . F 5 HOH B 51 613 613 HOH HOH . F 5 HOH B 52 614 614 HOH HOH . F 5 HOH B 53 615 615 HOH HOH . F 5 HOH B 54 618 618 HOH HOH . F 5 HOH B 55 620 620 HOH HOH . F 5 HOH B 56 624 624 HOH HOH . F 5 HOH B 57 629 629 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 34.294 _atom_site.Cartn_y 4.307 _atom_site.Cartn_z 22.27 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 193 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #