data_1DSY # _model_server_result.job_id kcM73h22GQTjbm9dCCCvhg _model_server_result.datetime_utc '2024-11-27 01:55:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dsy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 1DSY # _exptl.entry_id 1DSY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1DSY _cell.length_a 58.8 _cell.length_b 58.8 _cell.length_c 91.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DSY _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O MET 32 A MET 186 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 A OD1 ASP 33 A ASP 187 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc3 A OD2 ASP 33 A ASP 187 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc4 A OD1 ASP 33 A ASP 187 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc5 A OD2 ASP 39 A ASP 193 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc6 A OD2 ASP 92 A ASP 246 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc7 A OD1 ASP 92 A ASP 246 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc8 A OD2 ASP 92 A ASP 246 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.229 ? metalc ? metalc9 A O TRP 93 A TRP 247 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc10 A OD1 ASP 94 A ASP 248 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc11 A OD2 ASP 94 A ASP 248 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc12 A OD1 ASP 94 A ASP 248 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc13 A OD2 ASP 100 A ASP 254 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc14 F O HOH . A HOH 304 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.154 ? metalc ? metalc15 E O4 PSF . A PSF 401 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc16 E O3 PSF . A PSF 401 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DSY _atom_sites.fract_transf_matrix[1][1] 0.017007 _atom_sites.fract_transf_matrix[1][2] 0.009819 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019638 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 501 501 CA CA . C 2 CA A 1 502 502 CA CA . D 3 PO4 A 1 601 601 PO4 PO4 . E 4 PSF A 1 401 401 PSF PSE . F 5 HOH A 1 301 301 HOH HOH . F 5 HOH A 2 302 302 HOH HOH . F 5 HOH A 3 303 303 HOH HOH . F 5 HOH A 4 304 304 HOH HOH . F 5 HOH A 5 305 305 HOH HOH . F 5 HOH A 6 306 306 HOH HOH . F 5 HOH A 7 307 307 HOH HOH . F 5 HOH A 8 308 308 HOH HOH . F 5 HOH A 9 309 309 HOH HOH . F 5 HOH A 10 310 310 HOH HOH . F 5 HOH A 11 311 311 HOH HOH . F 5 HOH A 12 312 312 HOH HOH . F 5 HOH A 13 313 313 HOH HOH . F 5 HOH A 14 314 314 HOH HOH . F 5 HOH A 15 315 315 HOH HOH . F 5 HOH A 16 316 316 HOH HOH . F 5 HOH A 17 317 317 HOH HOH . F 5 HOH A 18 318 318 HOH HOH . F 5 HOH A 19 319 319 HOH HOH . F 5 HOH A 20 320 320 HOH HOH . F 5 HOH A 21 321 321 HOH HOH . F 5 HOH A 22 322 322 HOH HOH . F 5 HOH A 23 323 323 HOH HOH . F 5 HOH A 24 324 324 HOH HOH . F 5 HOH A 25 325 325 HOH HOH . F 5 HOH A 26 326 326 HOH HOH . F 5 HOH A 27 327 327 HOH HOH . F 5 HOH A 28 328 328 HOH HOH . F 5 HOH A 29 329 329 HOH HOH . F 5 HOH A 30 330 330 HOH HOH . F 5 HOH A 31 331 331 HOH HOH . F 5 HOH A 32 332 332 HOH HOH . F 5 HOH A 33 333 333 HOH HOH . F 5 HOH A 34 334 334 HOH HOH . F 5 HOH A 35 335 335 HOH HOH . F 5 HOH A 36 336 336 HOH HOH . F 5 HOH A 37 337 337 HOH HOH . F 5 HOH A 38 338 338 HOH HOH . F 5 HOH A 39 339 339 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.034 _atom_site.Cartn_y 32.642 _atom_site.Cartn_z 11.382 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #