data_1DTH
#
_model_server_result.job_id            Lx8e2xPZ2_ZiD3e-VJp72g 
_model_server_result.datetime_utc      '2024-12-21 16:19:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dth 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":973}' 
#
_entry.id    1DTH 
#
_exptl.entry_id    1DTH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              477.64 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1DTH 
_cell.length_a            97.21 
_cell.length_b            97.21 
_cell.length_c            87.91 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DTH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 118 A CYS 117 1_555 A SG CYS 198 A CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 158 A CYS 157 1_555 A SG CYS 165 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 B SG CYS 118 B CYS 117 1_555 B SG CYS 198 B CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf4 B SG CYS 158 B CYS 157 1_555 B SG CYS 165 B CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc1 A OE1 GLU 10 A GLU 9 1_555 D CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc2 A OD1 ASP 94 A ASP 93 1_555 D CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc3 A OD2 ASP 94 A ASP 93 1_555 D CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? 
metalc ? metalc4 A NE2 HIS 143 A HIS 142 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc5 A NE2 HIS 147 A HIS 146 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc6 A NE2 HIS 153 A HIS 152 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc7 A O CYS 198 A CYS 197 1_555 D CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc8 A OD1 ASN 201 A ASN 200 1_555 D CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? 
metalc ? metalc9 C ZN ZN . A ZN 901 1_555 E O4 BAT . A BAT 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
metalc ? metalc10 B OE1 GLU 10 B GLU 9 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc11 B OD1 ASP 94 B ASP 93 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc12 B OD2 ASP 94 B ASP 93 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? 
metalc ? metalc13 B NE2 HIS 143 B HIS 142 1_555 F ZN ZN . B ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
metalc ? metalc14 B NE2 HIS 147 B HIS 146 1_555 F ZN ZN . B ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc15 B NE2 HIS 153 B HIS 152 1_555 F ZN ZN . B ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc16 B O CYS 198 B CYS 197 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc17 B OD1 ASN 201 B ASN 200 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc18 B ND2 ASN 201 B ASN 200 1_555 G CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? 
metalc ? metalc19 F ZN ZN . B ZN 902 1_555 H O4 BAT . B BAT 973 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? 
#
_chem_comp.formula           'C23 H31 N3 O4 S2' 
_chem_comp.formula_weight    477.64 
_chem_comp.id                BAT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     BATIMASTAT;BB94 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BAT sing 70 n n 
C1 C3 BAT sing 71 n n 
C1 C8 BAT sing 72 n n 
C1 H1 BAT sing 73 n n 
C2 N1 BAT sing 74 n n 
C2 O1 BAT doub 75 n n 
C3 S1 BAT sing 76 n n 
C3 H31 BAT sing 77 n n 
C3 H32 BAT sing 78 n n 
C4 C5 BAT doub 79 n y 
C4 S1 BAT sing 80 n n 
C4 S2 BAT sing 81 n y 
C5 C6 BAT sing 82 n y 
C5 H5 BAT sing 83 n n 
C6 C7 BAT doub 84 n y 
C6 H6 BAT sing 85 n n 
C7 S2 BAT sing 86 n y 
C7 H7 BAT sing 87 n n 
C8 C9 BAT sing 88 n n 
C8 C13 BAT sing 89 n n 
C8 H8 BAT sing 90 n n 
C9 C10 BAT sing 91 n n 
C9 H91 BAT sing 92 n n 
C9 H92 BAT sing 93 n n 
C10 C11 BAT sing 94 n n 
C10 C12 BAT sing 95 n n 
C10 H10 BAT sing 96 n n 
C11 H111 BAT sing 97 n n 
C11 H112 BAT sing 98 n n 
C11 H113 BAT sing 99 n n 
C12 H121 BAT sing 100 n n 
C12 H122 BAT sing 101 n n 
C12 H123 BAT sing 102 n n 
C13 N2 BAT sing 103 n n 
C13 O3 BAT doub 104 n n 
C14 C15 BAT sing 105 n n 
C14 C17 BAT sing 106 n n 
C14 N2 BAT sing 107 n n 
C14 H14 BAT sing 108 n n 
C15 N3 BAT sing 109 n n 
C15 O4 BAT doub 110 n n 
C16 N3 BAT sing 111 n n 
C16 H161 BAT sing 112 n n 
C16 H162 BAT sing 113 n n 
C16 H163 BAT sing 114 n n 
C17 C18 BAT sing 115 n n 
C17 H171 BAT sing 116 n n 
C17 H172 BAT sing 117 n n 
C18 C19 BAT doub 118 n y 
C18 C23 BAT sing 119 n y 
C19 C20 BAT sing 120 n y 
C19 H19 BAT sing 121 n n 
C20 C21 BAT doub 122 n y 
C20 H20 BAT sing 123 n n 
C21 C22 BAT sing 124 n y 
C21 H21 BAT sing 125 n n 
C22 C23 BAT doub 126 n y 
C22 H22 BAT sing 127 n n 
C23 H23 BAT sing 128 n n 
N1 O2 BAT sing 129 n n 
N1 HN1 BAT sing 130 n n 
N2 HN2 BAT sing 131 n n 
N3 HN3 BAT sing 132 n n 
O2 HO2 BAT sing 133 n n 
#
_atom_sites.entry_id                     1DTH 
_atom_sites.fract_transf_matrix[1][1]    0.010287 
_atom_sites.fract_transf_matrix[1][2]    0.005939 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011878 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011375 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 901 901 ZN ZN . 
D 3 CA A 1 903 903 CA CA . 
E 4 BAT A 1 972 972 BAT DSX . 
F 2 ZN B 1 902 902 ZN ZN . 
G 3 CA B 1 904 904 CA CA . 
H 4 BAT B 1 973 973 BAT DSX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BAT . . . H 4 -1.587 25.068 43.546 0.9 27.92 ? C1 BAT 973 B 1 
HETATM 2 C C2 BAT . . . H 4 -0.4 26.031 43.748 0.9 29.74 ? C2 BAT 973 B 1 
HETATM 3 C C3 BAT . . . H 4 -1.482 24.465 42.14 0.9 28.04 ? C3 BAT 973 B 1 
HETATM 4 C C4 BAT . . . H 4 -0.008 22.748 40.309 0.9 28.8 ? C4 BAT 973 B 1 
HETATM 5 C C5 BAT . . . H 4 -0.096 23.696 39.281 0.9 19.08 ? C5 BAT 973 B 1 
HETATM 6 C C6 BAT . . . H 4 0.229 23.087 37.988 0.9 40 ? C6 BAT 973 B 1 
HETATM 7 C C7 BAT . . . H 4 0.537 21.727 38.14 0.9 28.84 ? C7 BAT 973 B 1 
HETATM 8 C C8 BAT . . . H 4 -1.886 24.037 44.674 0.9 18.53 ? C8 BAT 973 B 1 
HETATM 9 C C9 BAT . . . H 4 -0.886 23.011 45.297 0.9 30.02 ? C9 BAT 973 B 1 
HETATM 10 C C10 BAT . . . H 4 0.027 23.477 46.456 0.9 33.54 ? C10 BAT 973 B 1 
HETATM 11 C C11 BAT . . . H 4 1.38 24.096 46.069 0.9 20.79 ? C11 BAT 973 B 1 
HETATM 12 C C12 BAT . . . H 4 0.452 22.189 47.187 0.9 32.2 ? C12 BAT 973 B 1 
HETATM 13 C C13 BAT . . . H 4 -2.767 24.716 45.742 0.9 37.98 ? C13 BAT 973 B 1 
HETATM 14 C C14 BAT . . . H 4 -4.842 24.468 47.038 0.9 27.05 ? C14 BAT 973 B 1 
HETATM 15 C C15 BAT . . . H 4 -5.577 25.659 46.395 0.9 31.3 ? C15 BAT 973 B 1 
HETATM 16 C C16 BAT . . . H 4 -6.167 27.981 46.391 0.9 31.41 ? C16 BAT 973 B 1 
HETATM 17 C C17 BAT . . . H 4 -4.194 24.588 48.425 0.9 20.14 ? C17 BAT 973 B 1 
HETATM 18 C C18 BAT . . . H 4 -4.072 23.212 49.054 0.9 30.87 ? C18 BAT 973 B 1 
HETATM 19 C C19 BAT . . . H 4 -5.053 22.742 49.927 0.9 21.33 ? C19 BAT 973 B 1 
HETATM 20 C C20 BAT . . . H 4 -4.951 21.454 50.482 0.9 30.19 ? C20 BAT 973 B 1 
HETATM 21 C C21 BAT . . . H 4 -3.866 20.639 50.156 0.9 26.89 ? C21 BAT 973 B 1 
HETATM 22 C C22 BAT . . . H 4 -2.885 21.106 49.283 0.9 40.59 ? C22 BAT 973 B 1 
HETATM 23 C C23 BAT . . . H 4 -2.987 22.394 48.73 0.9 38.39 ? C23 BAT 973 B 1 
HETATM 24 N N1 BAT . . . H 4 -1.06 27.235 43.946 0.9 36.15 ? N1 BAT 973 B 1 
HETATM 25 N N2 BAT . . . H 4 -3.864 24.018 46.07 0.9 36.43 ? N2 BAT 973 B 1 
HETATM 26 N N3 BAT . . . H 4 -5.476 26.852 46.991 0.9 29.36 ? N3 BAT 973 B 1 
HETATM 27 O O1 BAT . . . H 4 0.78 25.854 43.603 0.9 30.36 ? O1 BAT 973 B 1 
HETATM 28 O O2 BAT . . . H 4 -0.585 28.431 44.011 0.9 32.82 ? O2 BAT 973 B 1 
HETATM 29 O O3 BAT . . . H 4 -2.412 25.733 46.352 0.9 25.48 ? O3 BAT 973 B 1 
HETATM 30 O O4 BAT . . . H 4 -6.221 25.491 45.362 0.9 36.16 ? O4 BAT 973 B 1 
HETATM 31 S S1 BAT . . . H 4 -0.313 23.086 41.987 0.9 30.09 ? S1 BAT 973 B 1 
HETATM 32 S S2 BAT . . . H 4 0.451 21.158 39.771 0.9 27.69 ? S2 BAT 973 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#