data_1DUO # _model_server_result.job_id WYVJpku4ygIhpKoUCGSIxA _model_server_result.datetime_utc '2024-11-22 09:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1duo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":155}' # _entry.id 1DUO # _exptl.entry_id 1DUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 83.112 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-METHYLIMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DUO _cell.length_a 40.161 _cell.length_b 49.033 _cell.length_c 79.24 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B FE HEM . A HEM 154 1_555 C N3 1MZ . A 1MZ 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc2 B FE HEM . A HEM 154 1_555 D O HOH . A HOH 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'C4 H7 N2 1' _chem_comp.formula_weight 83.112 _chem_comp.id 1MZ _chem_comp.mon_nstd_flag . _chem_comp.name 1-METHYLIMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 1MZ sing 1 n y N1 C5 1MZ sing 2 n y N1 CM1 1MZ sing 3 n n C2 N3 1MZ doub 4 n y C2 H2 1MZ sing 5 n n N3 C4 1MZ sing 6 n y N3 HN3 1MZ sing 7 n n C4 C5 1MZ doub 8 n y C4 H4 1MZ sing 9 n n C5 H5 1MZ sing 10 n n CM1 HM11 1MZ sing 11 n n CM1 HM12 1MZ sing 12 n n CM1 HM13 1MZ sing 13 n n # _atom_sites.entry_id 1DUO _atom_sites.fract_transf_matrix[1][1] 0.0249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 154 0 HEM HEM . C 3 1MZ A 1 155 0 1MZ 1IM . D 4 HOH A 1 156 0 HOH WAT . D 4 HOH A 2 157 0 HOH WAT . D 4 HOH A 3 158 0 HOH WAT . D 4 HOH A 4 159 0 HOH WAT . D 4 HOH A 5 160 0 HOH WAT . D 4 HOH A 6 161 0 HOH WAT . D 4 HOH A 7 162 0 HOH WAT . D 4 HOH A 8 163 0 HOH WAT . D 4 HOH A 9 164 0 HOH WAT . D 4 HOH A 10 165 0 HOH WAT . D 4 HOH A 11 166 0 HOH WAT . D 4 HOH A 12 167 0 HOH WAT . D 4 HOH A 13 168 0 HOH WAT . D 4 HOH A 14 169 0 HOH WAT . D 4 HOH A 15 170 0 HOH WAT . D 4 HOH A 16 171 0 HOH WAT . D 4 HOH A 17 172 0 HOH WAT . D 4 HOH A 18 173 0 HOH WAT . D 4 HOH A 19 174 0 HOH WAT . D 4 HOH A 20 175 0 HOH WAT . D 4 HOH A 21 176 0 HOH WAT . D 4 HOH A 22 177 0 HOH WAT . D 4 HOH A 23 178 0 HOH WAT . D 4 HOH A 24 179 0 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 1MZ . . . C 3 -8.629 29.447 -6.702 1 22.67 ? N1 1MZ 155 A 1 HETATM 2 C C2 1MZ . . . C 3 -7.44 29.363 -7.283 1 15.13 ? C2 1MZ 155 A 1 HETATM 3 N N3 1MZ . . . C 3 -7.082 30.556 -7.78 1 25.85 ? N3 1MZ 155 A 1 HETATM 4 C C4 1MZ . . . C 3 -8.061 31.474 -7.522 1 46.92 ? C4 1MZ 155 A 1 HETATM 5 C C5 1MZ . . . C 3 -9.028 30.789 -6.843 1 27.6 ? C5 1MZ 155 A 1 HETATM 6 C CM1 1MZ . . . C 3 -9.446 28.276 -6.02 1 19.75 ? CM1 1MZ 155 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #