data_1DUR
#
_model_server_result.job_id            i4MqdIE_2V6nPuiQYDVnEQ 
_model_server_result.datetime_utc      '2024-10-10 05:17:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dur 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":57}' 
#
_entry.id    1DUR 
#
_exptl.entry_id    1DUR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.64 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IRON/SULFUR CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1DUR 
_cell.length_a            30.52 
_cell.length_b            37.75 
_cell.length_c            39.37 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DUR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 8 A CYS 8 1_555 B FE1 SF4 . A SF4 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc2 A SG CYS 11 A CYS 11 1_555 B FE2 SF4 . A SF4 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc3 A SG CYS 14 A CYS 14 1_555 B FE4 SF4 . A SF4 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc4 A SG CYS 18 A CYS 18 1_555 C FE3 SF4 . A SF4 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc5 A SG CYS 36 A CYS 36 1_555 C FE1 SF4 . A SF4 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc6 A SG CYS 39 A CYS 39 1_555 C FE2 SF4 . A SF4 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc7 A SG CYS 42 A CYS 42 1_555 C FE4 SF4 . A SF4 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc8 A SG CYS 46 A CYS 46 1_555 B FE3 SF4 . A SF4 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
#
_chem_comp.formula           'Fe4 S4' 
_chem_comp.formula_weight    351.64 
_chem_comp.id                SF4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IRON/SULFUR CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 SF4 sing 180 n n 
FE1 S3 SF4 sing 181 n n 
FE1 S4 SF4 sing 182 n n 
FE2 S1 SF4 sing 183 n n 
FE2 S3 SF4 sing 184 n n 
FE2 S4 SF4 sing 185 n n 
FE3 S1 SF4 sing 186 n n 
FE3 S2 SF4 sing 187 n n 
FE3 S4 SF4 sing 188 n n 
FE4 S1 SF4 sing 189 n n 
FE4 S2 SF4 sing 190 n n 
FE4 S3 SF4 sing 191 n n 
#
_atom_sites.entry_id                     1DUR 
_atom_sites.fract_transf_matrix[1][1]    0.032765 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02649 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0254 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SF4 A 1 56 56 SF4 FS4 . 
C 2 SF4 A 1 57 57 SF4 FS4 . 
D 3 HOH A 1 105 105 HOH H2O . 
D 3 HOH A 2 152 152 HOH H2O . 
D 3 HOH A 3 153 153 HOH H2O . 
D 3 HOH A 4 154 154 HOH H2O . 
D 3 HOH A 5 155 155 HOH H2O . 
D 3 HOH A 6 156 156 HOH H2O . 
D 3 HOH A 7 157 157 HOH H2O . 
D 3 HOH A 8 159 159 HOH H2O . 
D 3 HOH A 9 160 160 HOH H2O . 
D 3 HOH A 10 161 161 HOH H2O . 
D 3 HOH A 11 162 162 HOH H2O . 
D 3 HOH A 12 163 163 HOH H2O . 
D 3 HOH A 13 164 164 HOH H2O . 
D 3 HOH A 14 165 165 HOH H2O . 
D 3 HOH A 15 166 166 HOH H2O . 
D 3 HOH A 16 167 167 HOH H2O . 
D 3 HOH A 17 168 168 HOH H2O . 
D 3 HOH A 18 171 171 HOH H2O . 
D 3 HOH A 19 172 172 HOH H2O . 
D 3 HOH A 20 173 173 HOH H2O . 
D 3 HOH A 21 174 174 HOH H2O . 
D 3 HOH A 22 175 175 HOH H2O . 
D 3 HOH A 23 176 176 HOH H2O . 
D 3 HOH A 24 177 177 HOH H2O . 
D 3 HOH A 25 178 178 HOH H2O . 
D 3 HOH A 26 179 179 HOH H2O . 
D 3 HOH A 27 180 180 HOH H2O . 
D 3 HOH A 28 182 182 HOH H2O . 
D 3 HOH A 29 184 184 HOH H2O . 
D 3 HOH A 30 185 185 HOH H2O . 
D 3 HOH A 31 186 186 HOH H2O . 
D 3 HOH A 32 187 187 HOH H2O . 
D 3 HOH A 33 190 190 HOH H2O . 
D 3 HOH A 34 191 191 HOH H2O . 
D 3 HOH A 35 192 192 HOH H2O . 
D 3 HOH A 36 195 195 HOH H2O . 
D 3 HOH A 37 1001 1001 HOH H2O . 
D 3 HOH A 38 1002 1002 HOH H2O . 
D 3 HOH A 39 1005 1005 HOH H2O . 
D 3 HOH A 40 1006 1006 HOH H2O . 
D 3 HOH A 41 1007 1007 HOH H2O . 
D 3 HOH A 42 1008 1008 HOH H2O . 
D 3 HOH A 43 1012 1012 HOH H2O . 
D 3 HOH A 44 1013 1013 HOH H2O . 
D 3 HOH A 45 1015 1015 HOH H2O . 
D 3 HOH A 46 1017 1017 HOH H2O . 
D 3 HOH A 47 1018 1018 HOH H2O . 
D 3 HOH A 48 1020 1020 HOH H2O . 
D 3 HOH A 49 1021 1021 HOH H2O . 
D 3 HOH A 50 1025 1025 HOH H2O . 
D 3 HOH A 51 1026 1026 HOH H2O . 
D 3 HOH A 52 1027 1027 HOH H2O . 
D 3 HOH A 53 1028 1028 HOH H2O . 
D 3 HOH A 54 1029 1029 HOH H2O . 
D 3 HOH A 55 1031 1031 HOH H2O . 
D 3 HOH A 56 1032 1032 HOH H2O . 
D 3 HOH A 57 1033 1033 HOH H2O . 
D 3 HOH A 58 1034 1034 HOH H2O . 
D 3 HOH A 59 1035 1035 HOH H2O . 
D 3 HOH A 60 1036 1036 HOH H2O . 
D 3 HOH A 61 1037 1037 HOH H2O . 
D 3 HOH A 62 1038 1038 HOH H2O . 
D 3 HOH A 63 1039 1039 HOH H2O . 
D 3 HOH A 64 1043 1043 HOH H2O . 
D 3 HOH A 65 1045 1045 HOH H2O . 
D 3 HOH A 66 1046 1046 HOH H2O . 
D 3 HOH A 67 1047 1047 HOH H2O . 
D 3 HOH A 68 1048 1048 HOH H2O . 
D 3 HOH A 69 1051 1051 HOH H2O . 
D 3 HOH A 70 1053 1053 HOH H2O . 
D 3 HOH A 71 1054 1054 HOH H2O . 
D 3 HOH A 72 1055 1055 HOH H2O . 
D 3 HOH A 73 2005 2005 HOH H2O . 
D 3 HOH A 74 2006 2006 HOH H2O . 
D 3 HOH A 75 2008 2008 HOH H2O . 
D 3 HOH A 76 2017 2017 HOH H2O . 
D 3 HOH A 77 2020 2020 HOH H2O . 
D 3 HOH A 78 2021 2021 HOH H2O . 
D 3 HOH A 79 2025 2025 HOH H2O . 
D 3 HOH A 80 2028 2028 HOH H2O . 
D 3 HOH A 81 2031 2031 HOH H2O . 
D 3 HOH A 82 2032 2032 HOH H2O . 
D 3 HOH A 83 2034 2034 HOH H2O . 
D 3 HOH A 84 2038 2038 HOH H2O . 
D 3 HOH A 85 2045 2045 HOH H2O . 
D 3 HOH A 86 2055 2055 HOH H2O . 
D 3 HOH A 87 3017 3017 HOH H2O . 
D 3 HOH A 88 3020 3020 HOH H2O . 
D 3 HOH A 89 3025 3025 HOH H2O . 
D 3 HOH A 90 3031 3031 HOH H2O . 
D 3 HOH A 91 3032 3032 HOH H2O . 
D 3 HOH A 92 3055 3055 HOH H2O . 
D 3 HOH A 93 4025 4025 HOH H2O . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 SF4 . . . C 2 22.971 0.613 19.116 1 8.73 ? FE1 SF4 57 A 1 
HETATM 2 FE FE2 SF4 . . . C 2 23.261 2.242 21.253 1 9.61 ? FE2 SF4 57 A 1 
HETATM 3 FE FE3 SF4 . . . C 2 25.376 1.029 20.272 1 9.59 ? FE3 SF4 57 A 1 
HETATM 4 FE FE4 SF4 . . . C 2 24.134 3.033 18.889 1 8.71 ? FE4 SF4 57 A 1 
HETATM 5 S S1 SF4 . . . C 2 25.088 3.227 20.822 1 8.38 ? S1 SF4 57 A 1 
HETATM 6 S S2 SF4 . . . C 2 24.898 1.053 18.082 1 8.81 ? S2 SF4 57 A 1 
HETATM 7 S S3 SF4 . . . C 2 22.086 2.724 19.404 1 7.9 ? S3 SF4 57 A 1 
HETATM 8 S S4 SF4 . . . C 2 23.519 0.072 21.165 1 8.3 ? S4 SF4 57 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           8 
#