data_1DV4
#
_model_server_result.job_id            -UHwcFXhDVw6zGyBAuP5Eg 
_model_server_result.datetime_utc      '2025-01-02 23:07:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    1DV4 
#
_exptl.entry_id    1DV4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              4363.03 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OCTADECATUNGSTENYL DIPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1DV4 
_cell.length_a            407.1 
_cell.length_b            407.1 
_cell.length_c            176.008 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DV4 
_symmetry.cell_setting             tetragonal 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'O62 P2 W18' 
_chem_comp.formula_weight    4363.03 
_chem_comp.id                WO2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OCTADECATUNGSTENYL DIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
W1 O5 WO2 sing 374 n n 
W1 O7 WO2 sing 375 n n 
W1 O14 WO2 sing 376 n n 
W1 O21 WO2 sing 377 n n 
W1 O52 WO2 sing 378 n n 
W1 OP3 WO2 sing 379 n n 
W2 O5 WO2 sing 380 n n 
W2 O28 WO2 sing 381 n n 
W2 O31 WO2 sing 382 n n 
W2 O37 WO2 sing 383 n n 
W2 O44 WO2 sing 384 n n 
W2 OP7 WO2 sing 385 n n 
W3 O2 WO2 sing 386 n n 
W3 O8 WO2 sing 387 n n 
W3 O11 WO2 sing 388 n n 
W3 O15 WO2 sing 389 n n 
W3 O24 WO2 sing 390 n n 
W3 OP2 WO2 sing 391 n n 
W4 O2 WO2 sing 392 n n 
W4 O29 WO2 sing 393 n n 
W4 O34 WO2 sing 394 n n 
W4 O38 WO2 sing 395 n n 
W4 O47 WO2 sing 396 n n 
W4 OP6 WO2 sing 397 n n 
W5 O4 WO2 sing 398 n n 
W5 O7 WO2 sing 399 n n 
W5 O16 WO2 sing 400 n n 
W5 O22 WO2 sing 401 n n 
W5 O53 WO2 sing 402 n n 
W5 OP1 WO2 sing 403 n n 
W6 O4 WO2 sing 404 n n 
W6 O28 WO2 sing 405 n n 
W6 O32 WO2 sing 406 n n 
W6 O39 WO2 sing 407 n n 
W6 O45 WO2 sing 408 n n 
W6 OP5 WO2 sing 409 n n 
W7 O1 WO2 sing 410 n n 
W7 O9 WO2 sing 411 n n 
W7 O13 WO2 sing 412 n n 
W7 O15 WO2 sing 413 n n 
W7 O25 WO2 sing 414 n n 
W7 OP2 WO2 sing 415 n n 
W8 O1 WO2 sing 416 n n 
W8 O30 WO2 sing 417 n n 
W8 O36 WO2 sing 418 n n 
W8 O38 WO2 sing 419 n n 
W8 O48 WO2 sing 420 n n 
W8 OP6 WO2 sing 421 n n 
W9 O6 WO2 sing 422 n n 
W9 O9 WO2 sing 423 n n 
W9 O12 WO2 sing 424 n n 
W9 O14 WO2 sing 425 n n 
W9 O20 WO2 sing 426 n n 
W9 OP3 WO2 sing 427 n n 
W10 O6 WO2 sing 428 n n 
W10 O30 WO2 sing 429 n n 
W10 O35 WO2 sing 430 n n 
W10 O37 WO2 sing 431 n n 
W10 O43 WO2 sing 432 n n 
W10 OP7 WO2 sing 433 n n 
W11 O3 WO2 sing 434 n n 
W11 O8 WO2 sing 435 n n 
W11 O10 WO2 sing 436 n n 
W11 O16 WO2 sing 437 n n 
W11 O23 WO2 sing 438 n n 
W11 OP1 WO2 sing 439 n n 
W12 O3 WO2 sing 440 n n 
W12 O29 WO2 sing 441 n n 
W12 O33 WO2 sing 442 n n 
W12 O39 WO2 sing 443 n n 
W12 O46 WO2 sing 444 n n 
W12 OP5 WO2 sing 445 n n 
W13 O33 WO2 sing 446 n n 
W13 O34 WO2 sing 447 n n 
W13 O40 WO2 sing 448 n n 
W13 O42 WO2 sing 449 n n 
W13 O51 WO2 sing 450 n n 
W13 OP8 WO2 sing 451 n n 
W14 O31 WO2 sing 452 n n 
W14 O32 WO2 sing 453 n n 
W14 O40 WO2 sing 454 n n 
W14 O41 WO2 sing 455 n n 
W14 O50 WO2 sing 456 n n 
W14 OP8 WO2 sing 457 n n 
W15 O35 WO2 sing 458 n n 
W15 O36 WO2 sing 459 n n 
W15 O41 WO2 sing 460 n n 
W15 O42 WO2 sing 461 n n 
W15 O49 WO2 sing 462 n n 
W15 OP8 WO2 sing 463 n n 
W16 O10 WO2 sing 464 n n 
W16 O11 WO2 sing 465 n n 
W16 O17 WO2 sing 466 n n 
W16 O19 WO2 sing 467 n n 
W16 O54 WO2 sing 468 n n 
W16 OP4 WO2 sing 469 n n 
W17 O17 WO2 sing 470 n n 
W17 O18 WO2 sing 471 n n 
W17 O27 WO2 sing 472 n n 
W17 O52 WO2 sing 473 n n 
W17 O53 WO2 sing 474 n n 
W17 OP4 WO2 sing 475 n n 
W18 O12 WO2 sing 476 n n 
W18 O13 WO2 sing 477 n n 
W18 O18 WO2 sing 478 n n 
W18 O19 WO2 sing 479 n n 
W18 O26 WO2 sing 480 n n 
W18 OP4 WO2 sing 481 n n 
P1 OP1 WO2 sing 482 n n 
P1 OP2 WO2 sing 483 n n 
P1 OP3 WO2 sing 484 n n 
P1 OP4 WO2 sing 485 n n 
P2 OP5 WO2 sing 486 n n 
P2 OP6 WO2 sing 487 n n 
P2 OP7 WO2 sing 488 n n 
P2 OP8 WO2 sing 489 n n 
#
_atom_sites.entry_id                     1DV4 
_atom_sites.fract_transf_matrix[1][1]    0.002456 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.002456 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005682 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          D 
_pdbx_nonpoly_scheme.entity_id        4 
_pdbx_nonpoly_scheme.mon_id           WO2 
_pdbx_nonpoly_scheme.pdb_strand_id    E 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       WO2 
_pdbx_nonpoly_scheme.auth_mon_id      WO2 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 W W1 WO2 . . . D 4 53.321 90.554 164.037 1 0 ? W1 WO2 1 E 1 
HETATM 2 W W2 WO2 . . . D 4 54.711 94.026 164.448 1 0 ? W2 WO2 1 E 1 
HETATM 3 W W3 WO2 . . . D 4 55.266 89.026 170.601 1 0 ? W3 WO2 1 E 1 
HETATM 4 W W4 WO2 . . . D 4 56.732 92.468 170.956 1 0 ? W4 WO2 1 E 1 
HETATM 5 W W5 WO2 . . . D 4 51.023 91.274 166.826 1 0 ? W5 WO2 1 E 1 
HETATM 6 W W6 WO2 . . . D 4 52.458 94.711 167.274 1 0 ? W6 WO2 1 E 1 
HETATM 7 W W7 WO2 . . . D 4 57.35 88.385 168.061 1 0 ? W7 WO2 1 E 1 
HETATM 8 W W8 WO2 . . . D 4 58.812 91.823 168.389 1 0 ? W8 WO2 1 E 1 
HETATM 9 W W9 WO2 . . . D 4 56.394 89.306 164.627 1 0 ? W9 WO2 1 E 1 
HETATM 10 W W10 WO2 . . . D 4 57.791 92.751 164.997 1 0 ? W10 WO2 1 E 1 
HETATM 11 W W11 WO2 . . . D 4 51.929 90.435 169.947 1 0 ? W11 WO2 1 E 1 
HETATM 12 W W12 WO2 . . . D 4 53.385 93.864 170.386 1 0 ? W12 WO2 1 E 1 
HETATM 13 W W13 WO2 . . . D 4 56.374 96.029 169.982 1 0 ? W13 WO2 1 E 1 
HETATM 14 W W14 WO2 . . . D 4 55.514 96.769 166.805 1 0 ? W14 WO2 1 E 1 
HETATM 15 W W15 WO2 . . . D 4 58.541 95.417 167.448 1 0 ? W15 WO2 1 E 1 
HETATM 16 W W16 WO2 . . . D 4 52.664 86.962 168.914 1 0 ? W16 WO2 1 E 1 
HETATM 17 W W17 WO2 . . . D 4 51.648 87.759 165.8 1 0 ? W17 WO2 1 E 1 
HETATM 18 W W18 WO2 . . . D 4 54.729 86.43 166.282 1 0 ? W18 WO2 1 E 1 
HETATM 19 O O1 WO2 . . . D 4 58.149 90.09 168.465 1 0 ? O1 WO2 1 E 1 
HETATM 20 O O2 WO2 . . . D 4 56.25 90.665 170.834 1 0 ? O2 WO2 1 E 1 
HETATM 21 O O3 WO2 . . . D 4 52.407 92.266 170.056 1 0 ? O3 WO2 1 E 1 
HETATM 22 O O4 WO2 . . . D 4 51.546 92.987 167.31 1 0 ? O4 WO2 1 E 1 
HETATM 23 O O5 WO2 . . . D 4 54.25 92.293 163.969 1 0 ? O5 WO2 1 E 1 
HETATM 24 O O6 WO2 . . . D 4 56.952 91.062 164.529 1 0 ? O6 WO2 1 E 1 
HETATM 25 O O7 WO2 . . . D 4 52.092 91.371 165.25 1 0 ? O7 WO2 1 E 1 
HETATM 26 O O8 WO2 . . . D 4 53.636 90.176 170.605 1 0 ? O8 WO2 1 E 1 
HETATM 27 O O9 WO2 . . . D 4 57.199 89.043 166.234 1 0 ? O9 WO2 1 E 1 
HETATM 28 O O10 WO2 . . . D 4 51.964 88.719 169.461 1 0 ? O10 WO2 1 E 1 
HETATM 29 O O11 WO2 . . . D 4 54.128 87.503 169.873 1 0 ? O11 WO2 1 E 1 
HETATM 30 O O12 WO2 . . . D 4 55.382 87.574 164.998 1 0 ? O12 WO2 1 E 1 
HETATM 31 O O13 WO2 . . . D 4 56.134 87.007 167.367 1 0 ? O13 WO2 1 E 1 
HETATM 32 O O14 WO2 . . . D 4 54.912 89.766 163.397 1 0 ? O14 WO2 1 E 1 
HETATM 33 O O15 WO2 . . . D 4 56.812 88.2 169.815 1 0 ? O15 WO2 1 E 1 
HETATM 34 O O16 WO2 . . . D 4 50.583 90.833 168.774 1 0 ? O16 WO2 1 E 1 
HETATM 35 O O17 WO2 . . . D 4 51.429 86.814 167.653 1 0 ? O17 WO2 1 E 1 
HETATM 36 O O18 WO2 . . . D 4 53.135 86.443 165.468 1 0 ? O18 WO2 1 E 1 
HETATM 37 O O19 WO2 . . . D 4 53.705 85.811 167.825 1 0 ? O19 WO2 1 E 1 
HETATM 38 O O20 WO2 . . . D 4 57.519 88.613 163.477 1 0 ? O20 WO2 1 E 1 
HETATM 39 O O21 WO2 . . . D 4 52.593 90.759 162.493 1 0 ? O21 WO2 1 E 1 
HETATM 40 O O22 WO2 . . . D 4 49.438 91.547 166.188 1 0 ? O22 WO2 1 E 1 
HETATM 41 O O23 WO2 . . . D 4 50.918 90.343 171.36 1 0 ? O23 WO2 1 E 1 
HETATM 42 O O24 WO2 . . . D 4 55.397 88.421 172.138 1 0 ? O24 WO2 1 E 1 
HETATM 43 O O25 WO2 . . . D 4 58.731 87.264 168.282 1 0 ? O25 WO2 1 E 1 
HETATM 44 O O26 WO2 . . . D 4 55.234 84.852 165.616 1 0 ? O26 WO2 1 E 1 
HETATM 45 O O27 WO2 . . . D 4 50.432 87.25 164.918 1 0 ? O27 WO2 1 E 1 
HETATM 46 O O28 WO2 . . . D 4 53.208 94.108 165.616 1 0 ? O28 WO2 1 E 1 
HETATM 47 O O29 WO2 . . . D 4 54.792 92.733 171.028 1 0 ? O29 WO2 1 E 1 
HETATM 48 O O30 WO2 . . . D 4 58.461 91.917 166.577 1 0 ? O30 WO2 1 E 1 
HETATM 49 O O31 WO2 . . . D 4 55.373 95.654 165.33 1 0 ? O31 WO2 1 E 1 
HETATM 50 O O32 WO2 . . . D 4 53.783 96.129 167.298 1 0 ? O32 WO2 1 E 1 
HETATM 51 O O33 WO2 . . . D 4 54.628 95.363 170.284 1 0 ? O33 WO2 1 E 1 
HETATM 52 O O34 WO2 . . . D 4 56.958 94.342 170.696 1 0 ? O34 WO2 1 E 1 
HETATM 53 O O35 WO2 . . . D 4 58.252 94.411 165.857 1 0 ? O35 WO2 1 E 1 
HETATM 54 O O36 WO2 . . . D 4 58.962 93.78 168.271 1 0 ? O36 WO2 1 E 1 
HETATM 55 O O37 WO2 . . . D 4 56.513 93.712 163.831 1 0 ? O37 WO2 1 E 1 
HETATM 56 O O38 WO2 . . . D 4 58.455 92.089 170.25 1 0 ? O38 WO2 1 E 1 
HETATM 57 O O39 WO2 . . . D 4 52.246 94.845 169.186 1 0 ? O39 WO2 1 E 1 
HETATM 58 O O40 WO2 . . . D 4 55.656 97.228 168.637 1 0 ? O40 WO2 1 E 1 
HETATM 59 O O41 WO2 . . . D 4 57.371 96.766 166.669 1 0 ? O41 WO2 1 E 1 
HETATM 60 O O42 WO2 . . . D 4 58.107 96.15 169.14 1 0 ? O42 WO2 1 E 1 
HETATM 61 O O43 WO2 . . . D 4 59.128 92.761 163.923 1 0 ? O43 WO2 1 E 1 
HETATM 62 O O44 WO2 . . . D 4 54.187 94.803 163.099 1 0 ? O44 WO2 1 E 1 
HETATM 63 O O45 WO2 . . . D 4 51.136 95.662 166.646 1 0 ? O45 WO2 1 E 1 
HETATM 64 O O46 WO2 . . . D 4 52.657 94.341 171.886 1 0 ? O46 WO2 1 E 1 
HETATM 65 O O47 WO2 . . . D 4 57.04 92.431 172.641 1 0 ? O47 WO2 1 E 1 
HETATM 66 O O48 WO2 . . . D 4 60.754 91.632 168.534 1 0 ? O48 WO2 1 E 1 
HETATM 67 O O49 WO2 . . . D 4 60.066 96.056 167.218 1 0 ? O49 WO2 1 E 1 
HETATM 68 O O50 WO2 . . . D 4 55.108 98.285 166.12 1 0 ? O50 WO2 1 E 1 
HETATM 69 O O51 WO2 . . . D 4 56.593 97.036 171.211 1 0 ? O51 WO2 1 E 1 
HETATM 70 O O52 WO2 . . . D 4 52.566 88.823 164.518 1 0 ? O52 WO2 1 E 1 
HETATM 71 O O53 WO2 . . . D 4 51.079 89.427 166.509 1 0 ? O53 WO2 1 E 1 
HETATM 72 O O54 WO2 . . . D 4 51.902 85.834 170.067 1 0 ? O54 WO2 1 E 1 
HETATM 73 P P1 WO2 . . . D 4 54.15 89.723 167.344 1 0 ? P1 WO2 1 E 1 
HETATM 74 O OP1 WO2 . . . D 4 52.999 90.668 167.87 1 0 ? OP1 WO2 1 E 1 
HETATM 75 O OP2 WO2 . . . D 4 55.282 89.626 168.385 1 0 ? OP2 WO2 1 E 1 
HETATM 76 O OP3 WO2 . . . D 4 54.659 90.218 165.937 1 0 ? OP3 WO2 1 E 1 
HETATM 77 O OP4 WO2 . . . D 4 53.572 88.355 167.172 1 0 ? OP4 WO2 1 E 1 
HETATM 78 P P2 WO2 . . . D 4 55.677 93.386 167.756 1 0 ? P2 WO2 1 E 1 
HETATM 79 O OP5 WO2 . . . D 4 54.19 93.447 168.179 1 0 ? OP5 WO2 1 E 1 
HETATM 80 O OP6 WO2 . . . D 4 56.441 92.369 168.683 1 0 ? OP6 WO2 1 E 1 
HETATM 81 O OP7 WO2 . . . D 4 55.746 92.989 166.291 1 0 ? OP7 WO2 1 E 1 
HETATM 82 O OP8 WO2 . . . D 4 56.269 94.856 167.916 1 0 ? OP8 WO2 1 E 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           82 
#