data_1DVV
#
_model_server_result.job_id            vkN7sTDEOI_pEKMRn1GkFw 
_model_server_result.datetime_utc      '2024-11-23 11:04:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dvv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":83}' 
#
_entry.id    1DVV 
#
_exptl.entry_id    1DVV 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1DVV 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DVV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NE2 
_struct_conn.ptnr1_label_comp_id            HIS 
_struct_conn.ptnr1_label_seq_id             16 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             HIS 
_struct_conn.ptnr1_auth_seq_id              16 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              83 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.512 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     1DVV 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           HEM 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      83 
_pdbx_nonpoly_scheme.auth_seq_num     83 
_pdbx_nonpoly_scheme.pdb_mon_id       HEM 
_pdbx_nonpoly_scheme.auth_mon_id      HEM 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 63.295 -4.222 -1.814 1 0 ? CHA HEM 83 A 1 
HETATM 2 C CHB HEM . . . B 2 65.2 0.143 -1.219 1 0 ? CHB HEM 83 A 1 
HETATM 3 C CHC HEM . . . B 2 64.413 0.974 -5.886 1 0 ? CHC HEM 83 A 1 
HETATM 4 C CHD HEM . . . B 2 61.919 -3.067 -6.219 1 0 ? CHD HEM 83 A 1 
HETATM 5 C C1A HEM . . . B 2 64.045 -3.174 -1.332 1 0 ? C1A HEM 83 A 1 
HETATM 6 C C2A HEM . . . B 2 64.768 -3.224 -0.097 1 0 ? C2A HEM 83 A 1 
HETATM 7 C C3A HEM . . . B 2 65.173 -1.957 0.168 1 0 ? C3A HEM 83 A 1 
HETATM 8 C C4A HEM . . . B 2 64.808 -1.167 -0.996 1 0 ? C4A HEM 83 A 1 
HETATM 9 C CMA HEM . . . B 2 65.873 -1.456 1.425 1 0 ? CMA HEM 83 A 1 
HETATM 10 C CAA HEM . . . B 2 65.19 -4.532 0.551 1 0 ? CAA HEM 83 A 1 
HETATM 11 C CBA HEM . . . B 2 65.708 -5.503 -0.518 1 0 ? CBA HEM 83 A 1 
HETATM 12 C CGA HEM . . . B 2 66.682 -6.492 0.122 1 0 ? CGA HEM 83 A 1 
HETATM 13 O O1A HEM . . . B 2 67.439 -7.104 -0.612 1 0 ? O1A HEM 83 A 1 
HETATM 14 O O2A HEM . . . B 2 66.654 -6.619 1.335 1 0 ? O2A HEM 83 A 1 
HETATM 15 C C1B HEM . . . B 2 65.119 0.762 -2.452 1 0 ? C1B HEM 83 A 1 
HETATM 16 C C2B HEM . . . B 2 65.706 2.046 -2.764 1 0 ? C2B HEM 83 A 1 
HETATM 17 C C3B HEM . . . B 2 65.525 2.225 -4.089 1 0 ? C3B HEM 83 A 1 
HETATM 18 C C4B HEM . . . B 2 64.822 1.091 -4.58 1 0 ? C4B HEM 83 A 1 
HETATM 19 C CMB HEM . . . B 2 66.39 2.999 -1.797 1 0 ? CMB HEM 83 A 1 
HETATM 20 C CAB HEM . . . B 2 65.987 3.362 -4.982 1 0 ? CAB HEM 83 A 1 
HETATM 21 C CBB HEM . . . B 2 67.479 3.259 -5.296 1 0 ? CBB HEM 83 A 1 
HETATM 22 C C1C HEM . . . B 2 63.7 -0.074 -6.395 1 0 ? C1C HEM 83 A 1 
HETATM 23 C C2C HEM . . . B 2 63.219 -0.149 -7.757 1 0 ? C2C HEM 83 A 1 
HETATM 24 C C3C HEM . . . B 2 62.452 -1.252 -7.817 1 0 ? C3C HEM 83 A 1 
HETATM 25 C C4C HEM . . . B 2 62.521 -1.877 -6.523 1 0 ? C4C HEM 83 A 1 
HETATM 26 C CMC HEM . . . B 2 63.527 0.81 -8.893 1 0 ? CMC HEM 83 A 1 
HETATM 27 C CAC HEM . . . B 2 61.515 -1.692 -8.937 1 0 ? CAC HEM 83 A 1 
HETATM 28 C CBC HEM . . . B 2 62.238 -1.857 -10.274 1 0 ? CBC HEM 83 A 1 
HETATM 29 C C1D HEM . . . B 2 62.018 -3.708 -5.016 1 0 ? C1D HEM 83 A 1 
HETATM 30 C C2D HEM . . . B 2 61.427 -4.99 -4.733 1 0 ? C2D HEM 83 A 1 
HETATM 31 C C3D HEM . . . B 2 61.823 -5.33 -3.491 1 0 ? C3D HEM 83 A 1 
HETATM 32 C C4D HEM . . . B 2 62.659 -4.246 -3.023 1 0 ? C4D HEM 83 A 1 
HETATM 33 C CMD HEM . . . B 2 60.502 -5.771 -5.651 1 0 ? CMD HEM 83 A 1 
HETATM 34 C CAD HEM . . . B 2 61.415 -6.571 -2.711 1 0 ? CAD HEM 83 A 1 
HETATM 35 C CBD HEM . . . B 2 62.541 -7.606 -2.685 1 0 ? CBD HEM 83 A 1 
HETATM 36 C CGD HEM . . . B 2 62.286 -8.669 -3.752 1 0 ? CGD HEM 83 A 1 
HETATM 37 O O1D HEM . . . B 2 61.129 -8.919 -4.048 1 0 ? O1D HEM 83 A 1 
HETATM 38 O O2D HEM . . . B 2 63.252 -9.215 -4.258 1 0 ? O2D HEM 83 A 1 
HETATM 39 N NA HEM . . . B 2 64.164 -1.952 -1.936 1 0 ? NA HEM 83 A 1 
HETATM 40 N NB HEM . . . B 2 64.58 0.181 -3.587 1 0 ? NB HEM 83 A 1 
HETATM 41 N NC HEM . . . B 2 63.281 -1.144 -5.648 1 0 ? NC HEM 83 A 1 
HETATM 42 N ND HEM . . . B 2 62.75 -3.242 -3.952 1 0 ? ND HEM 83 A 1 
HETATM 43 FE FE HEM . . . B 2 63.679 -1.531 -3.776 1 0 ? FE HEM 83 A 1 
HETATM 44 H HHB HEM . . . B 2 65.475 0.804 -0.373 1 0 ? HHB HEM 83 A 1 
HETATM 45 H HHC HEM . . . B 2 64.608 1.806 -6.56 1 0 ? HHC HEM 83 A 1 
HETATM 46 H HHD HEM . . . B 2 61.315 -3.537 -6.995 1 0 ? HHD HEM 83 A 1 
HETATM 47 H HAB HEM . . . B 2 65.441 3.328 -5.909 1 0 ? HAB HEM 83 A 1 
HETATM 48 H HAC HEM . . . B 2 61.073 -2.637 -8.669 1 0 ? HAC HEM 83 A 1 
HETATM 49 H H2A HEM . . . B 2 67.65 3.528 -6.327 1 0 ? H2A HEM 83 A 1 
HETATM 50 H HHA HEM . . . B 2 63.118 -5.1 -1.194 1 0 ? HHA HEM 83 A 1 
HETATM 51 H HMA1 HEM . . . B 2 65.277 -1.701 2.292 1 0 ? HMA1 HEM 83 A 1 
HETATM 52 H HMA2 HEM . . . B 2 65.999 -0.386 1.364 1 0 ? HMA2 HEM 83 A 1 
HETATM 53 H HMA3 HEM . . . B 2 66.841 -1.929 1.51 1 0 ? HMA3 HEM 83 A 1 
HETATM 54 H HAA1 HEM . . . B 2 64.341 -4.973 1.052 1 0 ? HAA1 HEM 83 A 1 
HETATM 55 H HAA2 HEM . . . B 2 65.971 -4.339 1.27 1 0 ? HAA2 HEM 83 A 1 
HETATM 56 H HBA1 HEM . . . B 2 66.217 -4.949 -1.293 1 0 ? HBA1 HEM 83 A 1 
HETATM 57 H HBA2 HEM . . . B 2 64.876 -6.042 -0.949 1 0 ? HBA2 HEM 83 A 1 
HETATM 58 H HMB1 HEM . . . B 2 67.264 3.422 -2.268 1 0 ? HMB1 HEM 83 A 1 
HETATM 59 H HMB2 HEM . . . B 2 66.684 2.458 -0.909 1 0 ? HMB2 HEM 83 A 1 
HETATM 60 H HMB3 HEM . . . B 2 65.707 3.79 -1.528 1 0 ? HMB3 HEM 83 A 1 
HETATM 61 H HBB1 HEM . . . B 2 67.812 2.245 -5.128 1 0 ? HBB1 HEM 83 A 1 
HETATM 62 H HBB2 HEM . . . B 2 68.028 3.93 -4.652 1 0 ? HBB2 HEM 83 A 1 
HETATM 63 H HMC1 HEM . . . B 2 62.609 1.255 -9.246 1 0 ? HMC1 HEM 83 A 1 
HETATM 64 H HMC2 HEM . . . B 2 64.001 0.27 -9.699 1 0 ? HMC2 HEM 83 A 1 
HETATM 65 H HMC3 HEM . . . B 2 64.19 1.584 -8.539 1 0 ? HMC3 HEM 83 A 1 
HETATM 66 H HBC1 HEM . . . B 2 61.772 -1.225 -11.015 1 0 ? HBC1 HEM 83 A 1 
HETATM 67 H HBC2 HEM . . . B 2 62.179 -2.887 -10.59 1 0 ? HBC2 HEM 83 A 1 
HETATM 68 H HMD1 HEM . . . B 2 59.816 -6.358 -5.056 1 0 ? HMD1 HEM 83 A 1 
HETATM 69 H HMD2 HEM . . . B 2 61.086 -6.426 -6.279 1 0 ? HMD2 HEM 83 A 1 
HETATM 70 H HMD3 HEM . . . B 2 59.945 -5.083 -6.269 1 0 ? HMD3 HEM 83 A 1 
HETATM 71 H HAD1 HEM . . . B 2 60.543 -7.008 -3.175 1 0 ? HAD1 HEM 83 A 1 
HETATM 72 H HAD2 HEM . . . B 2 61.172 -6.287 -1.698 1 0 ? HAD2 HEM 83 A 1 
HETATM 73 H HBD1 HEM . . . B 2 62.574 -8.077 -1.714 1 0 ? HBD1 HEM 83 A 1 
HETATM 74 H HBD2 HEM . . . B 2 63.485 -7.117 -2.881 1 0 ? HBD2 HEM 83 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           5705 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           74 
#