data_1DXO
#
_model_server_result.job_id            pxTL7dTTupMtX7uoVOFarQ 
_model_server_result.datetime_utc      '2024-10-14 04:28:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dxo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":302}' 
#
_entry.id    1DXO 
#
_exptl.entry_id    1DXO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              164.201 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DUROQUINONE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.24 
_cell.angle_beta          76.73 
_cell.angle_gamma         86.33 
_cell.entry_id            1DXO 
_cell.length_a            55.579 
_cell.length_b            56.912 
_cell.length_c            97.755 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DXO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,G,H,K,L,N,P 1 1 
A,C,E,F,I,J,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C10 H12 O2' 
_chem_comp.formula_weight    164.201 
_chem_comp.id                DQN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DUROQUINONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 DQN doub 83 n n 
C1 C2 DQN sing 84 n n 
C1 C6 DQN sing 85 n n 
C2 C2M DQN sing 86 n n 
C2 C3 DQN doub 87 n n 
C2M H2M1 DQN sing 88 n n 
C2M H2M2 DQN sing 89 n n 
C2M H2M3 DQN sing 90 n n 
C3 C3M DQN sing 91 n n 
C3 C4 DQN sing 92 n n 
C3M H3M1 DQN sing 93 n n 
C3M H3M2 DQN sing 94 n n 
C3M H3M3 DQN sing 95 n n 
C4 O4 DQN doub 96 n n 
C4 C5 DQN sing 97 n n 
C5 C5M DQN sing 98 n n 
C5 C6 DQN doub 99 n n 
C5M H5M1 DQN sing 100 n n 
C5M H5M2 DQN sing 101 n n 
C5M H5M3 DQN sing 102 n n 
C6 C6M DQN sing 103 n n 
C6M H6M1 DQN sing 104 n n 
C6M H6M2 DQN sing 105 n n 
C6M H6M3 DQN sing 106 n n 
#
_atom_sites.entry_id                     1DXO 
_atom_sites.fract_transf_matrix[1][1]    0.017992 
_atom_sites.fract_transf_matrix[1][2]    -0.001154 
_atom_sites.fract_transf_matrix[1][3]    -0.004087 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017607 
_atom_sites.fract_transf_matrix[2][3]    -0.004156 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010799 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 301 301 FAD FAD . 
F 3 DQN A 1 302 302 DQN DQN . 
G 2 FAD B 1 301 301 FAD FAD . 
H 3 DQN B 1 302 302 DQN DQN . 
I 2 FAD C 1 301 301 FAD FAD . 
J 3 DQN C 1 302 302 DQN DQN . 
K 2 FAD D 1 301 301 FAD FAD . 
L 3 DQN D 1 302 302 DQN DQN . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
M 4 HOH A 5 2005 2005 HOH HOH . 
M 4 HOH A 6 2006 2006 HOH HOH . 
M 4 HOH A 7 2007 2007 HOH HOH . 
M 4 HOH A 8 2008 2008 HOH HOH . 
M 4 HOH A 9 2009 2009 HOH HOH . 
M 4 HOH A 10 2010 2010 HOH HOH . 
M 4 HOH A 11 2011 2011 HOH HOH . 
M 4 HOH A 12 2012 2012 HOH HOH . 
M 4 HOH A 13 2013 2013 HOH HOH . 
M 4 HOH A 14 2014 2014 HOH HOH . 
M 4 HOH A 15 2015 2015 HOH HOH . 
M 4 HOH A 16 2016 2016 HOH HOH . 
M 4 HOH A 17 2017 2017 HOH HOH . 
M 4 HOH A 18 2018 2018 HOH HOH . 
M 4 HOH A 19 2019 2019 HOH HOH . 
M 4 HOH A 20 2020 2020 HOH HOH . 
M 4 HOH A 21 2021 2021 HOH HOH . 
M 4 HOH A 22 2022 2022 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
N 4 HOH B 4 2004 2004 HOH HOH . 
N 4 HOH B 5 2005 2005 HOH HOH . 
N 4 HOH B 6 2006 2006 HOH HOH . 
N 4 HOH B 7 2007 2007 HOH HOH . 
N 4 HOH B 8 2008 2008 HOH HOH . 
N 4 HOH B 9 2009 2009 HOH HOH . 
N 4 HOH B 10 2010 2010 HOH HOH . 
N 4 HOH B 11 2011 2011 HOH HOH . 
N 4 HOH B 12 2012 2012 HOH HOH . 
N 4 HOH B 13 2013 2013 HOH HOH . 
N 4 HOH B 14 2014 2014 HOH HOH . 
N 4 HOH B 15 2015 2015 HOH HOH . 
N 4 HOH B 16 2016 2016 HOH HOH . 
N 4 HOH B 17 2017 2017 HOH HOH . 
N 4 HOH B 18 2018 2018 HOH HOH . 
N 4 HOH B 19 2019 2019 HOH HOH . 
N 4 HOH B 20 2020 2020 HOH HOH . 
N 4 HOH B 21 2021 2021 HOH HOH . 
N 4 HOH B 22 2022 2022 HOH HOH . 
N 4 HOH B 23 2023 2023 HOH HOH . 
N 4 HOH B 24 2024 2024 HOH HOH . 
N 4 HOH B 25 2025 2025 HOH HOH . 
N 4 HOH B 26 2026 2026 HOH HOH . 
N 4 HOH B 27 2027 2027 HOH HOH . 
N 4 HOH B 28 2028 2028 HOH HOH . 
O 4 HOH C 1 2001 2001 HOH HOH . 
O 4 HOH C 2 2002 2002 HOH HOH . 
O 4 HOH C 3 2003 2003 HOH HOH . 
O 4 HOH C 4 2004 2004 HOH HOH . 
O 4 HOH C 5 2005 2005 HOH HOH . 
O 4 HOH C 6 2006 2006 HOH HOH . 
O 4 HOH C 7 2007 2007 HOH HOH . 
O 4 HOH C 8 2008 2008 HOH HOH . 
O 4 HOH C 9 2009 2009 HOH HOH . 
O 4 HOH C 10 2010 2010 HOH HOH . 
O 4 HOH C 11 2011 2011 HOH HOH . 
O 4 HOH C 12 2012 2012 HOH HOH . 
O 4 HOH C 13 2013 2013 HOH HOH . 
O 4 HOH C 14 2014 2014 HOH HOH . 
O 4 HOH C 15 2015 2015 HOH HOH . 
O 4 HOH C 16 2016 2016 HOH HOH . 
O 4 HOH C 17 2017 2017 HOH HOH . 
O 4 HOH C 18 2018 2018 HOH HOH . 
O 4 HOH C 19 2019 2019 HOH HOH . 
O 4 HOH C 20 2020 2020 HOH HOH . 
O 4 HOH C 21 2021 2021 HOH HOH . 
O 4 HOH C 22 2022 2022 HOH HOH . 
O 4 HOH C 23 2023 2023 HOH HOH . 
P 4 HOH D 1 2001 2001 HOH HOH . 
P 4 HOH D 2 2002 2002 HOH HOH . 
P 4 HOH D 3 2003 2003 HOH HOH . 
P 4 HOH D 4 2004 2004 HOH HOH . 
P 4 HOH D 5 2005 2005 HOH HOH . 
P 4 HOH D 6 2006 2006 HOH HOH . 
P 4 HOH D 7 2007 2007 HOH HOH . 
P 4 HOH D 8 2008 2008 HOH HOH . 
P 4 HOH D 9 2009 2009 HOH HOH . 
P 4 HOH D 10 2010 2010 HOH HOH . 
P 4 HOH D 11 2011 2011 HOH HOH . 
P 4 HOH D 12 2012 2012 HOH HOH . 
P 4 HOH D 13 2013 2013 HOH HOH . 
P 4 HOH D 14 2014 2014 HOH HOH . 
P 4 HOH D 15 2015 2015 HOH HOH . 
P 4 HOH D 16 2016 2016 HOH HOH . 
P 4 HOH D 17 2017 2017 HOH HOH . 
P 4 HOH D 18 2018 2018 HOH HOH . 
P 4 HOH D 19 2019 2019 HOH HOH . 
P 4 HOH D 20 2020 2020 HOH HOH . 
P 4 HOH D 21 2021 2021 HOH HOH . 
P 4 HOH D 22 2022 2022 HOH HOH . 
P 4 HOH D 23 2023 2023 HOH HOH . 
P 4 HOH D 24 2024 2024 HOH HOH . 
P 4 HOH D 25 2025 2025 HOH HOH . 
P 4 HOH D 26 2026 2026 HOH HOH . 
P 4 HOH D 27 2027 2027 HOH HOH . 
P 4 HOH D 28 2028 2028 HOH HOH . 
P 4 HOH D 29 2029 2029 HOH HOH . 
P 4 HOH D 30 2030 2030 HOH HOH . 
P 4 HOH D 31 2031 2031 HOH HOH . 
P 4 HOH D 32 2032 2032 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DQN . . . F 3 20.383 -5.413 4.165 0.9 36.21 ? C1 DQN 302 A 1 
HETATM 2 O O1 DQN . . . F 3 20.966 -4.693 3.311 0.9 36.76 ? O1 DQN 302 A 1 
HETATM 3 C C2 DQN . . . F 3 19.769 -4.734 5.376 0.9 35.93 ? C2 DQN 302 A 1 
HETATM 4 C C2M DQN . . . F 3 19.813 -3.214 5.415 0.9 35.4 ? C2M DQN 302 A 1 
HETATM 5 C C3 DQN . . . F 3 19.131 -5.487 6.358 0.9 36.08 ? C3 DQN 302 A 1 
HETATM 6 C C3M DQN . . . F 3 18.495 -4.825 7.572 0.9 34.96 ? C3M DQN 302 A 1 
HETATM 7 C C4 DQN . . . F 3 19.066 -7.008 6.197 0.9 36.54 ? C4 DQN 302 A 1 
HETATM 8 O O4 DQN . . . F 3 18.622 -7.742 7.071 0.9 37.96 ? O4 DQN 302 A 1 
HETATM 9 C C5 DQN . . . F 3 19.632 -7.694 4.971 0.9 36.37 ? C5 DQN 302 A 1 
HETATM 10 C C5M DQN . . . F 3 19.306 -9.16 4.817 0.9 35.28 ? C5M DQN 302 A 1 
HETATM 11 C C6 DQN . . . F 3 20.26 -6.924 3.993 0.9 36.14 ? C6 DQN 302 A 1 
HETATM 12 C C6M DQN . . . F 3 20.874 -7.536 2.776 0.9 35.4 ? C6M DQN 302 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           12 
#