data_1DXV # _model_server_result.job_id e-lgaKLBncPThtQunC0GrQ _model_server_result.datetime_utc '2024-12-25 02:27:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dxv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":499}' # _entry.id 1DXV # _exptl.entry_id 1DXV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.3 _cell.angle_gamma 90 _cell.entry_id 1DXV _cell.length_a 63.2 _cell.length_b 83.6 _cell.length_c 53.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DXV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc2 B NE2 HIS 92 B HIS 92 1_555 G FE HEM . B HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 C NE2 HIS 87 C HIS 87 1_555 H FE HEM . C HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc4 D NE2 HIS 92 D HIS 92 1_555 J FE HEM . D HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 351 n n S O2 SO4 doub 352 n n S O3 SO4 sing 353 n n S O4 SO4 sing 354 n n # _atom_sites.entry_id 1DXV _atom_sites.fract_transf_matrix[1][1] 0.015823 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002591 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 142 142 HEM HEM . F 4 SO4 B 1 500 500 SO4 SO4 . G 3 HEM B 1 147 147 HEM HEM . H 3 HEM C 1 142 142 HEM HEM . I 4 SO4 D 1 499 499 SO4 SO4 . J 3 HEM D 1 147 147 HEM HEM . K 5 HOH A 1 143 1 HOH HOH . K 5 HOH A 2 144 6 HOH HOH . K 5 HOH A 3 145 12 HOH HOH . K 5 HOH A 4 146 13 HOH HOH . K 5 HOH A 5 147 15 HOH HOH . K 5 HOH A 6 148 16 HOH HOH . K 5 HOH A 7 149 20 HOH HOH . K 5 HOH A 8 150 22 HOH HOH . K 5 HOH A 9 151 28 HOH HOH . K 5 HOH A 10 152 29 HOH HOH . K 5 HOH A 11 153 35 HOH HOH . K 5 HOH A 12 154 37 HOH HOH . K 5 HOH A 13 155 46 HOH HOH . K 5 HOH A 14 156 47 HOH HOH . K 5 HOH A 15 157 49 HOH HOH . K 5 HOH A 16 158 51 HOH HOH . K 5 HOH A 17 159 52 HOH HOH . K 5 HOH A 18 160 64 HOH HOH . K 5 HOH A 19 161 67 HOH HOH . K 5 HOH A 20 162 68 HOH HOH . K 5 HOH A 21 163 72 HOH HOH . K 5 HOH A 22 164 73 HOH HOH . K 5 HOH A 23 165 74 HOH HOH . K 5 HOH A 24 166 76 HOH HOH . K 5 HOH A 25 167 81 HOH HOH . K 5 HOH A 26 168 82 HOH HOH . K 5 HOH A 27 169 83 HOH HOH . K 5 HOH A 28 170 87 HOH HOH . K 5 HOH A 29 171 96 HOH HOH . K 5 HOH A 30 172 101 HOH HOH . K 5 HOH A 31 173 102 HOH HOH . K 5 HOH A 32 174 105 HOH HOH . K 5 HOH A 33 175 109 HOH HOH . K 5 HOH A 34 176 114 HOH HOH . K 5 HOH A 35 177 118 HOH HOH . K 5 HOH A 36 178 119 HOH HOH . K 5 HOH A 37 179 120 HOH HOH . K 5 HOH A 38 180 123 HOH HOH . K 5 HOH A 39 181 127 HOH HOH . K 5 HOH A 40 182 132 HOH HOH . K 5 HOH A 41 183 135 HOH HOH . K 5 HOH A 42 184 146 HOH HOH . K 5 HOH A 43 185 147 HOH HOH . K 5 HOH A 44 186 150 HOH HOH . K 5 HOH A 45 187 152 HOH HOH . K 5 HOH A 46 188 158 HOH HOH . K 5 HOH A 47 189 163 HOH HOH . K 5 HOH A 48 190 171 HOH HOH . K 5 HOH A 49 191 173 HOH HOH . K 5 HOH A 50 192 177 HOH HOH . K 5 HOH A 51 193 178 HOH HOH . K 5 HOH A 52 194 183 HOH HOH . K 5 HOH A 53 195 186 HOH HOH . K 5 HOH A 54 196 192 HOH HOH . K 5 HOH A 55 197 196 HOH HOH . K 5 HOH A 56 198 199 HOH HOH . K 5 HOH A 57 199 201 HOH HOH . K 5 HOH A 58 200 202 HOH HOH . K 5 HOH A 59 201 203 HOH HOH . K 5 HOH A 60 202 204 HOH HOH . K 5 HOH A 61 203 208 HOH HOH . K 5 HOH A 62 204 213 HOH HOH . K 5 HOH A 63 205 214 HOH HOH . K 5 HOH A 64 206 224 HOH HOH . K 5 HOH A 65 207 226 HOH HOH . K 5 HOH A 66 208 230 HOH HOH . L 5 HOH B 1 501 2 HOH HOH . L 5 HOH B 2 502 4 HOH HOH . L 5 HOH B 3 503 7 HOH HOH . L 5 HOH B 4 504 19 HOH HOH . L 5 HOH B 5 505 21 HOH HOH . L 5 HOH B 6 506 23 HOH HOH . L 5 HOH B 7 507 24 HOH HOH . L 5 HOH B 8 508 25 HOH HOH . L 5 HOH B 9 509 26 HOH HOH . L 5 HOH B 10 510 27 HOH HOH . L 5 HOH B 11 511 30 HOH HOH . L 5 HOH B 12 512 31 HOH HOH . L 5 HOH B 13 513 33 HOH HOH . L 5 HOH B 14 514 42 HOH HOH . L 5 HOH B 15 515 45 HOH HOH . L 5 HOH B 16 516 53 HOH HOH . L 5 HOH B 17 517 60 HOH HOH . L 5 HOH B 18 518 62 HOH HOH . L 5 HOH B 19 519 78 HOH HOH . L 5 HOH B 20 520 85 HOH HOH . L 5 HOH B 21 521 89 HOH HOH . L 5 HOH B 22 522 90 HOH HOH . L 5 HOH B 23 523 94 HOH HOH . L 5 HOH B 24 524 99 HOH HOH . L 5 HOH B 25 525 100 HOH HOH . L 5 HOH B 26 526 103 HOH HOH . L 5 HOH B 27 527 113 HOH HOH . L 5 HOH B 28 528 128 HOH HOH . L 5 HOH B 29 529 133 HOH HOH . L 5 HOH B 30 530 136 HOH HOH . L 5 HOH B 31 531 138 HOH HOH . L 5 HOH B 32 532 141 HOH HOH . L 5 HOH B 33 533 144 HOH HOH . L 5 HOH B 34 534 145 HOH HOH . L 5 HOH B 35 535 153 HOH HOH . L 5 HOH B 36 536 154 HOH HOH . L 5 HOH B 37 537 161 HOH HOH . L 5 HOH B 38 538 164 HOH HOH . L 5 HOH B 39 539 167 HOH HOH . L 5 HOH B 40 540 168 HOH HOH . L 5 HOH B 41 541 172 HOH HOH . L 5 HOH B 42 542 175 HOH HOH . L 5 HOH B 43 543 184 HOH HOH . L 5 HOH B 44 544 189 HOH HOH . L 5 HOH B 45 545 190 HOH HOH . L 5 HOH B 46 546 191 HOH HOH . L 5 HOH B 47 547 195 HOH HOH . L 5 HOH B 48 548 198 HOH HOH . L 5 HOH B 49 549 211 HOH HOH . L 5 HOH B 50 550 215 HOH HOH . L 5 HOH B 51 551 216 HOH HOH . L 5 HOH B 52 552 217 HOH HOH . L 5 HOH B 53 553 218 HOH HOH . L 5 HOH B 54 554 220 HOH HOH . M 5 HOH C 1 143 3 HOH HOH . M 5 HOH C 2 144 8 HOH HOH . M 5 HOH C 3 145 9 HOH HOH . M 5 HOH C 4 146 10 HOH HOH . M 5 HOH C 5 147 32 HOH HOH . M 5 HOH C 6 148 38 HOH HOH . M 5 HOH C 7 149 41 HOH HOH . M 5 HOH C 8 150 44 HOH HOH . M 5 HOH C 9 151 54 HOH HOH . M 5 HOH C 10 152 56 HOH HOH . M 5 HOH C 11 153 58 HOH HOH . M 5 HOH C 12 154 59 HOH HOH . M 5 HOH C 13 155 63 HOH HOH . M 5 HOH C 14 156 66 HOH HOH . M 5 HOH C 15 157 69 HOH HOH . M 5 HOH C 16 158 70 HOH HOH . M 5 HOH C 17 159 71 HOH HOH . M 5 HOH C 18 160 80 HOH HOH . M 5 HOH C 19 161 84 HOH HOH . M 5 HOH C 20 162 86 HOH HOH . M 5 HOH C 21 163 91 HOH HOH . M 5 HOH C 22 164 93 HOH HOH . M 5 HOH C 23 165 97 HOH HOH . M 5 HOH C 24 166 98 HOH HOH . M 5 HOH C 25 167 106 HOH HOH . M 5 HOH C 26 168 110 HOH HOH . M 5 HOH C 27 169 112 HOH HOH . M 5 HOH C 28 170 116 HOH HOH . M 5 HOH C 29 171 117 HOH HOH . M 5 HOH C 30 172 121 HOH HOH . M 5 HOH C 31 173 122 HOH HOH . M 5 HOH C 32 174 124 HOH HOH . M 5 HOH C 33 175 126 HOH HOH . M 5 HOH C 34 176 129 HOH HOH . M 5 HOH C 35 177 131 HOH HOH . M 5 HOH C 36 178 137 HOH HOH . M 5 HOH C 37 179 139 HOH HOH . M 5 HOH C 38 180 140 HOH HOH . M 5 HOH C 39 181 143 HOH HOH . M 5 HOH C 40 182 148 HOH HOH . M 5 HOH C 41 183 149 HOH HOH . M 5 HOH C 42 184 151 HOH HOH . M 5 HOH C 43 185 157 HOH HOH . M 5 HOH C 44 186 170 HOH HOH . M 5 HOH C 45 187 174 HOH HOH . M 5 HOH C 46 188 180 HOH HOH . M 5 HOH C 47 189 187 HOH HOH . M 5 HOH C 48 190 188 HOH HOH . M 5 HOH C 49 191 193 HOH HOH . M 5 HOH C 50 192 194 HOH HOH . M 5 HOH C 51 193 197 HOH HOH . M 5 HOH C 52 194 200 HOH HOH . M 5 HOH C 53 195 205 HOH HOH . M 5 HOH C 54 196 206 HOH HOH . M 5 HOH C 55 197 210 HOH HOH . M 5 HOH C 56 198 212 HOH HOH . M 5 HOH C 57 199 225 HOH HOH . M 5 HOH C 58 200 229 HOH HOH . M 5 HOH C 59 201 231 HOH HOH . M 5 HOH C 60 202 232 HOH HOH . N 5 HOH D 1 500 5 HOH HOH . N 5 HOH D 2 501 11 HOH HOH . N 5 HOH D 3 502 14 HOH HOH . N 5 HOH D 4 503 17 HOH HOH . N 5 HOH D 5 504 18 HOH HOH . N 5 HOH D 6 505 34 HOH HOH . N 5 HOH D 7 506 36 HOH HOH . N 5 HOH D 8 507 39 HOH HOH . N 5 HOH D 9 508 40 HOH HOH . N 5 HOH D 10 509 43 HOH HOH . N 5 HOH D 11 510 48 HOH HOH . N 5 HOH D 12 511 50 HOH HOH . N 5 HOH D 13 512 55 HOH HOH . N 5 HOH D 14 513 57 HOH HOH . N 5 HOH D 15 514 61 HOH HOH . N 5 HOH D 16 515 65 HOH HOH . N 5 HOH D 17 516 75 HOH HOH . N 5 HOH D 18 517 77 HOH HOH . N 5 HOH D 19 518 79 HOH HOH . N 5 HOH D 20 519 88 HOH HOH . N 5 HOH D 21 520 92 HOH HOH . N 5 HOH D 22 521 95 HOH HOH . N 5 HOH D 23 522 104 HOH HOH . N 5 HOH D 24 523 107 HOH HOH . N 5 HOH D 25 524 108 HOH HOH . N 5 HOH D 26 525 111 HOH HOH . N 5 HOH D 27 526 115 HOH HOH . N 5 HOH D 28 527 125 HOH HOH . N 5 HOH D 29 528 130 HOH HOH . N 5 HOH D 30 529 134 HOH HOH . N 5 HOH D 31 530 142 HOH HOH . N 5 HOH D 32 531 155 HOH HOH . N 5 HOH D 33 532 156 HOH HOH . N 5 HOH D 34 533 159 HOH HOH . N 5 HOH D 35 534 160 HOH HOH . N 5 HOH D 36 535 162 HOH HOH . N 5 HOH D 37 536 165 HOH HOH . N 5 HOH D 38 537 166 HOH HOH . N 5 HOH D 39 538 169 HOH HOH . N 5 HOH D 40 539 176 HOH HOH . N 5 HOH D 41 540 179 HOH HOH . N 5 HOH D 42 541 181 HOH HOH . N 5 HOH D 43 542 182 HOH HOH . N 5 HOH D 44 543 185 HOH HOH . N 5 HOH D 45 544 207 HOH HOH . N 5 HOH D 46 545 209 HOH HOH . N 5 HOH D 47 546 219 HOH HOH . N 5 HOH D 48 547 221 HOH HOH . N 5 HOH D 49 548 222 HOH HOH . N 5 HOH D 50 549 223 HOH HOH . N 5 HOH D 51 550 227 HOH HOH . N 5 HOH D 52 551 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 4 0.805 -6.986 38.421 1 107.7 ? S SO4 499 D 1 HETATM 2 O O1 SO4 . . . I 4 1.219 -8.199 39.215 1 108.53 ? O1 SO4 499 D 1 HETATM 3 O O2 SO4 . . . I 4 -0.685 -6.795 38.533 1 106.93 ? O2 SO4 499 D 1 HETATM 4 O O3 SO4 . . . I 4 1.491 -5.768 38.979 1 107.1 ? O3 SO4 499 D 1 HETATM 5 O O4 SO4 . . . I 4 1.198 -7.195 36.993 1 105.69 ? O4 SO4 499 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #