data_1DYF # _model_server_result.job_id jEqLTcl2wQ3g32jM1qF3AQ _model_server_result.datetime_utc '2025-04-08 23:42:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dyf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":178}' # _entry.id 1DYF # _exptl.entry_id 1DYF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1DYF _cell.length_a 61 _cell.length_b 61 _cell.length_c 96.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DYF _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 97 A CYS 97 1_555 D S2 BME . A BME 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? covale ? covale2 E S2 BME . A BME 900 1_555 E S2 BME . A BME 900 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DYF _atom_sites.fract_transf_matrix[1][1] 0.016393 _atom_sites.fract_transf_matrix[1][2] 0.009465 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 BME A 1 179 97 BME SEO . E 3 BME A 1 900 900 BME SEO . F 4 HOH A 1 901 171 HOH HOH . F 4 HOH A 2 902 172 HOH HOH . F 4 HOH A 3 903 174 HOH HOH . F 4 HOH A 4 904 175 HOH HOH . F 4 HOH A 5 905 176 HOH HOH . F 4 HOH A 6 906 177 HOH HOH . F 4 HOH A 7 907 179 HOH HOH . F 4 HOH A 8 908 180 HOH HOH . F 4 HOH A 9 909 181 HOH HOH . F 4 HOH A 10 910 182 HOH HOH . F 4 HOH A 11 911 183 HOH HOH . F 4 HOH A 12 912 184 HOH HOH . F 4 HOH A 13 913 185 HOH HOH . F 4 HOH A 14 914 186 HOH HOH . F 4 HOH A 15 915 187 HOH HOH . F 4 HOH A 16 916 188 HOH HOH . F 4 HOH A 17 917 189 HOH HOH . F 4 HOH A 18 918 190 HOH HOH . F 4 HOH A 19 919 191 HOH HOH . F 4 HOH A 20 920 192 HOH HOH . F 4 HOH A 21 921 193 HOH HOH . F 4 HOH A 22 922 194 HOH HOH . F 4 HOH A 23 923 195 HOH HOH . F 4 HOH A 24 924 196 HOH HOH . F 4 HOH A 25 925 197 HOH HOH . F 4 HOH A 26 926 198 HOH HOH . F 4 HOH A 27 927 199 HOH HOH . F 4 HOH A 28 928 200 HOH HOH . F 4 HOH A 29 929 201 HOH HOH . F 4 HOH A 30 930 202 HOH HOH . F 4 HOH A 31 931 203 HOH HOH . F 4 HOH A 32 932 204 HOH HOH . F 4 HOH A 33 933 205 HOH HOH . F 4 HOH A 34 934 206 HOH HOH . F 4 HOH A 35 935 207 HOH HOH . F 4 HOH A 36 936 208 HOH HOH . F 4 HOH A 37 937 209 HOH HOH . F 4 HOH A 38 938 210 HOH HOH . F 4 HOH A 39 939 211 HOH HOH . F 4 HOH A 40 940 213 HOH HOH . F 4 HOH A 41 941 214 HOH HOH . F 4 HOH A 42 942 215 HOH HOH . F 4 HOH A 43 943 216 HOH HOH . F 4 HOH A 44 944 217 HOH HOH . F 4 HOH A 45 945 218 HOH HOH . F 4 HOH A 46 946 219 HOH HOH . F 4 HOH A 47 947 220 HOH HOH . F 4 HOH A 48 948 221 HOH HOH . F 4 HOH A 49 949 222 HOH HOH . F 4 HOH A 50 950 223 HOH HOH . F 4 HOH A 51 951 224 HOH HOH . F 4 HOH A 52 952 225 HOH HOH . F 4 HOH A 53 953 226 HOH HOH . F 4 HOH A 54 954 227 HOH HOH . F 4 HOH A 55 955 228 HOH HOH . F 4 HOH A 56 956 229 HOH HOH . F 4 HOH A 57 957 230 HOH HOH . F 4 HOH A 58 958 231 HOH HOH . F 4 HOH A 59 959 232 HOH HOH . F 4 HOH A 60 960 233 HOH HOH . F 4 HOH A 61 961 234 HOH HOH . F 4 HOH A 62 962 235 HOH HOH . F 4 HOH A 63 963 236 HOH HOH . F 4 HOH A 64 964 237 HOH HOH . F 4 HOH A 65 965 238 HOH HOH . F 4 HOH A 66 966 239 HOH HOH . F 4 HOH A 67 967 240 HOH HOH . F 4 HOH A 68 968 242 HOH HOH . F 4 HOH A 69 969 243 HOH HOH . F 4 HOH A 70 970 244 HOH HOH . F 4 HOH A 71 971 245 HOH HOH . F 4 HOH A 72 972 246 HOH HOH . F 4 HOH A 73 973 247 HOH HOH . F 4 HOH A 74 974 248 HOH HOH . F 4 HOH A 75 975 249 HOH HOH . F 4 HOH A 76 976 250 HOH HOH . F 4 HOH A 77 977 251 HOH HOH . F 4 HOH A 78 978 253 HOH HOH . F 4 HOH A 79 979 254 HOH HOH . F 4 HOH A 80 980 255 HOH HOH . F 4 HOH A 81 981 256 HOH HOH . F 4 HOH A 82 982 257 HOH HOH . F 4 HOH A 83 983 258 HOH HOH . F 4 HOH A 84 984 259 HOH HOH . F 4 HOH A 85 985 260 HOH HOH . F 4 HOH A 86 986 261 HOH HOH . F 4 HOH A 87 987 262 HOH HOH . F 4 HOH A 88 988 263 HOH HOH . F 4 HOH A 89 989 264 HOH HOH . F 4 HOH A 90 990 266 HOH HOH . F 4 HOH A 91 991 267 HOH HOH . F 4 HOH A 92 992 268 HOH HOH . F 4 HOH A 93 993 269 HOH HOH . F 4 HOH A 94 994 270 HOH HOH . F 4 HOH A 95 995 271 HOH HOH . F 4 HOH A 96 996 272 HOH HOH . F 4 HOH A 97 997 273 HOH HOH . F 4 HOH A 98 998 274 HOH HOH . F 4 HOH A 99 999 276 HOH HOH . F 4 HOH A 100 1000 277 HOH HOH . F 4 HOH A 101 1001 278 HOH HOH . F 4 HOH A 102 1002 279 HOH HOH . F 4 HOH A 103 1003 280 HOH HOH . F 4 HOH A 104 1004 281 HOH HOH . F 4 HOH A 105 1005 282 HOH HOH . F 4 HOH A 106 1006 283 HOH HOH . F 4 HOH A 107 1007 284 HOH HOH . F 4 HOH A 108 1008 285 HOH HOH . F 4 HOH A 109 1009 286 HOH HOH . F 4 HOH A 110 1010 287 HOH HOH . F 4 HOH A 111 1011 288 HOH HOH . F 4 HOH A 112 1012 289 HOH HOH . F 4 HOH A 113 1013 290 HOH HOH . F 4 HOH A 114 1014 293 HOH HOH . F 4 HOH A 115 1015 294 HOH HOH . F 4 HOH A 116 1016 295 HOH HOH . F 4 HOH A 117 1017 296 HOH HOH . F 4 HOH A 118 1018 297 HOH HOH . F 4 HOH A 119 1019 298 HOH HOH . F 4 HOH A 120 1020 299 HOH HOH . F 4 HOH A 121 1021 300 HOH HOH . F 4 HOH A 122 1022 301 HOH HOH . F 4 HOH A 123 1023 302 HOH HOH . F 4 HOH A 124 1024 303 HOH HOH . F 4 HOH A 125 1025 304 HOH HOH . F 4 HOH A 126 1026 306 HOH HOH . F 4 HOH A 127 1027 307 HOH HOH . F 4 HOH A 128 1028 308 HOH HOH . F 4 HOH A 129 1029 309 HOH HOH . F 4 HOH A 130 1030 310 HOH HOH . F 4 HOH A 131 1031 311 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.325 _atom_site.Cartn_y 20.212 _atom_site.Cartn_z -8.058 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 33.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 178 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #