data_1DZX
#
_model_server_result.job_id            ZisSEtjgUXiEUDYyEFYcAQ 
_model_server_result.datetime_utc      '2024-11-14 20:40:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1dzx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":314}' 
#
_entry.id    1DZX 
#
_exptl.entry_id    1DZX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BETA-MERCAPTOETHANOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1DZX 
_cell.length_a            93.7 
_cell.length_b            93.7 
_cell.length_c            42.6 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1DZX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 46.85 46.85 0 
3 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -46.85 46.85 0 
4 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 93.7 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 14 P CYS 14 1_555 D S2 BME . P BME 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc1 E ZN ZN . P ZN 999 1_555 A OE2 GLU 73 P GLU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc2 E ZN ZN . P ZN 999 1_555 A NE2 HIS 92 P HIS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc3 E ZN ZN . P ZN 999 1_555 A NE2 HIS 94 P HIS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc4 E ZN ZN . P ZN 999 1_555 A NE2 HIS 155 P HIS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc5 E ZN ZN . P ZN 999 1_555 A OE1 GLU 73 P GLU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                BME 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BETA-MERCAPTOETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1DZX 
_atom_sites.fract_transf_matrix[1][1]    0.010672 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010672 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023474 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 P 1 300 300 SO4 SO4 . 
C 2 SO4 P 1 301 301 SO4 SO4 . 
D 3 BME P 1 314 314 BME BME . 
E 4 ZN P 1 999 999 ZN ZN . 
F 5 HOH P 1 2001 2001 HOH HOH . 
F 5 HOH P 2 2002 2002 HOH HOH . 
F 5 HOH P 3 2003 2003 HOH HOH . 
F 5 HOH P 4 2004 2004 HOH HOH . 
F 5 HOH P 5 2005 2005 HOH HOH . 
F 5 HOH P 6 2006 2006 HOH HOH . 
F 5 HOH P 7 2007 2007 HOH HOH . 
F 5 HOH P 8 2008 2008 HOH HOH . 
F 5 HOH P 9 2009 2009 HOH HOH . 
F 5 HOH P 10 2010 2010 HOH HOH . 
F 5 HOH P 11 2011 2011 HOH HOH . 
F 5 HOH P 12 2012 2012 HOH HOH . 
F 5 HOH P 13 2013 2013 HOH HOH . 
F 5 HOH P 14 2014 2014 HOH HOH . 
F 5 HOH P 15 2015 2015 HOH HOH . 
F 5 HOH P 16 2016 2016 HOH HOH . 
F 5 HOH P 17 2017 2017 HOH HOH . 
F 5 HOH P 18 2018 2018 HOH HOH . 
F 5 HOH P 19 2019 2019 HOH HOH . 
F 5 HOH P 20 2020 2020 HOH HOH . 
F 5 HOH P 21 2021 2021 HOH HOH . 
F 5 HOH P 22 2022 2022 HOH HOH . 
F 5 HOH P 23 2023 2023 HOH HOH . 
F 5 HOH P 24 2024 2024 HOH HOH . 
F 5 HOH P 25 2025 2025 HOH HOH . 
F 5 HOH P 26 2026 2026 HOH HOH . 
F 5 HOH P 27 2027 2027 HOH HOH . 
F 5 HOH P 28 2028 2028 HOH HOH . 
F 5 HOH P 29 2029 2029 HOH HOH . 
F 5 HOH P 30 2030 2030 HOH HOH . 
F 5 HOH P 31 2031 2031 HOH HOH . 
F 5 HOH P 32 2032 2032 HOH HOH . 
F 5 HOH P 33 2033 2033 HOH HOH . 
F 5 HOH P 34 2034 2034 HOH HOH . 
F 5 HOH P 35 2035 2035 HOH HOH . 
F 5 HOH P 36 2036 2036 HOH HOH . 
F 5 HOH P 37 2037 2037 HOH HOH . 
F 5 HOH P 38 2038 2038 HOH HOH . 
F 5 HOH P 39 2039 2039 HOH HOH . 
F 5 HOH P 40 2040 2040 HOH HOH . 
F 5 HOH P 41 2041 2041 HOH HOH . 
F 5 HOH P 42 2042 2042 HOH HOH . 
F 5 HOH P 43 2043 2043 HOH HOH . 
F 5 HOH P 44 2044 2044 HOH HOH . 
F 5 HOH P 45 2045 2045 HOH HOH . 
F 5 HOH P 46 2046 2046 HOH HOH . 
F 5 HOH P 47 2047 2047 HOH HOH . 
F 5 HOH P 48 2048 2048 HOH HOH . 
F 5 HOH P 49 2049 2049 HOH HOH . 
F 5 HOH P 50 2050 2050 HOH HOH . 
F 5 HOH P 51 2051 2051 HOH HOH . 
F 5 HOH P 52 2052 2052 HOH HOH . 
F 5 HOH P 53 2053 2053 HOH HOH . 
F 5 HOH P 54 2054 2054 HOH HOH . 
F 5 HOH P 55 2055 2055 HOH HOH . 
F 5 HOH P 56 2056 2056 HOH HOH . 
F 5 HOH P 57 2057 2057 HOH HOH . 
F 5 HOH P 58 2058 2058 HOH HOH . 
F 5 HOH P 59 2059 2059 HOH HOH . 
F 5 HOH P 60 2060 2060 HOH HOH . 
F 5 HOH P 61 2061 2061 HOH HOH . 
F 5 HOH P 62 2062 2062 HOH HOH . 
F 5 HOH P 63 2063 2063 HOH HOH . 
F 5 HOH P 64 2064 2064 HOH HOH . 
F 5 HOH P 65 2065 2065 HOH HOH . 
F 5 HOH P 66 2066 2066 HOH HOH . 
F 5 HOH P 67 2067 2067 HOH HOH . 
F 5 HOH P 68 2068 2068 HOH HOH . 
F 5 HOH P 69 2069 2069 HOH HOH . 
F 5 HOH P 70 2070 2070 HOH HOH . 
F 5 HOH P 71 2071 2071 HOH HOH . 
F 5 HOH P 72 2072 2072 HOH HOH . 
F 5 HOH P 73 2073 2073 HOH HOH . 
F 5 HOH P 74 2074 2074 HOH HOH . 
F 5 HOH P 75 2075 2075 HOH HOH . 
F 5 HOH P 76 2076 2076 HOH HOH . 
F 5 HOH P 77 2077 2077 HOH HOH . 
F 5 HOH P 78 2078 2078 HOH HOH . 
F 5 HOH P 79 2079 2079 HOH HOH . 
F 5 HOH P 80 2080 2080 HOH HOH . 
F 5 HOH P 81 2081 2081 HOH HOH . 
F 5 HOH P 82 2082 2082 HOH HOH . 
F 5 HOH P 83 2083 2083 HOH HOH . 
F 5 HOH P 84 2084 2084 HOH HOH . 
F 5 HOH P 85 2085 2085 HOH HOH . 
F 5 HOH P 86 2086 2086 HOH HOH . 
F 5 HOH P 87 2087 2087 HOH HOH . 
F 5 HOH P 88 2088 2088 HOH HOH . 
F 5 HOH P 89 2089 2089 HOH HOH . 
F 5 HOH P 90 2090 2090 HOH HOH . 
F 5 HOH P 91 2091 2091 HOH HOH . 
F 5 HOH P 92 2092 2092 HOH HOH . 
F 5 HOH P 93 2093 2093 HOH HOH . 
F 5 HOH P 94 2094 2094 HOH HOH . 
F 5 HOH P 95 2095 2095 HOH HOH . 
F 5 HOH P 96 2096 2096 HOH HOH . 
F 5 HOH P 97 2097 2097 HOH HOH . 
F 5 HOH P 98 2098 2098 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BME . . . D 3 -19.943 42.431 19.333 1 26.74 ? C1 BME 314 P 1 
HETATM 2 C C2 BME . . . D 3 -18.732 43.157 19.888 1 23.85 ? C2 BME 314 P 1 
HETATM 3 O O1 BME . . . D 3 -19.741 41.028 19.512 1 29.85 ? O1 BME 314 P 1 
HETATM 4 S S2 BME . . . D 3 -18.961 44.945 20.076 1 22.39 ? S2 BME 314 P 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#