data_1DZZ # _model_server_result.job_id 8dDkryiYIou2RSluDX7CfA _model_server_result.datetime_utc '2024-11-23 05:46:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1dzz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":314}' # _entry.id 1DZZ # _exptl.entry_id 1DZZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1DZZ _cell.length_a 93.7 _cell.length_b 93.7 _cell.length_c 42.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DZZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 46.85 46.85 0 3 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -46.85 46.85 0 4 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 93.7 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 14 P CYS 14 1_555 D S2 BME . P BME 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc1 E ZN ZN . P ZN 999 1_555 A OE2 GLU 73 P GLU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc2 E ZN ZN . P ZN 999 1_555 A NE2 HIS 92 P HIS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 E ZN ZN . P ZN 999 1_555 A NE2 HIS 94 P HIS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 E ZN ZN . P ZN 999 1_555 A NE2 HIS 155 P HIS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc5 E ZN ZN . P ZN 999 1_555 A OE1 GLU 73 P GLU 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1DZZ _atom_sites.fract_transf_matrix[1][1] 0.010672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 P 1 300 300 SO4 SO4 . C 2 SO4 P 1 301 301 SO4 SO4 . D 3 BME P 1 314 314 BME BME . E 4 ZN P 1 999 999 ZN ZN . F 5 HOH P 1 2001 2001 HOH HOH . F 5 HOH P 2 2002 2002 HOH HOH . F 5 HOH P 3 2003 2003 HOH HOH . F 5 HOH P 4 2004 2004 HOH HOH . F 5 HOH P 5 2005 2005 HOH HOH . F 5 HOH P 6 2006 2006 HOH HOH . F 5 HOH P 7 2007 2007 HOH HOH . F 5 HOH P 8 2008 2008 HOH HOH . F 5 HOH P 9 2009 2009 HOH HOH . F 5 HOH P 10 2010 2010 HOH HOH . F 5 HOH P 11 2011 2011 HOH HOH . F 5 HOH P 12 2012 2012 HOH HOH . F 5 HOH P 13 2013 2013 HOH HOH . F 5 HOH P 14 2014 2014 HOH HOH . F 5 HOH P 15 2015 2015 HOH HOH . F 5 HOH P 16 2016 2016 HOH HOH . F 5 HOH P 17 2017 2017 HOH HOH . F 5 HOH P 18 2018 2018 HOH HOH . F 5 HOH P 19 2019 2019 HOH HOH . F 5 HOH P 20 2020 2020 HOH HOH . F 5 HOH P 21 2021 2021 HOH HOH . F 5 HOH P 22 2022 2022 HOH HOH . F 5 HOH P 23 2023 2023 HOH HOH . F 5 HOH P 24 2024 2024 HOH HOH . F 5 HOH P 25 2025 2025 HOH HOH . F 5 HOH P 26 2026 2026 HOH HOH . F 5 HOH P 27 2027 2027 HOH HOH . F 5 HOH P 28 2028 2028 HOH HOH . F 5 HOH P 29 2029 2029 HOH HOH . F 5 HOH P 30 2030 2030 HOH HOH . F 5 HOH P 31 2031 2031 HOH HOH . F 5 HOH P 32 2032 2032 HOH HOH . F 5 HOH P 33 2033 2033 HOH HOH . F 5 HOH P 34 2034 2034 HOH HOH . F 5 HOH P 35 2035 2035 HOH HOH . F 5 HOH P 36 2036 2036 HOH HOH . F 5 HOH P 37 2037 2037 HOH HOH . F 5 HOH P 38 2038 2038 HOH HOH . F 5 HOH P 39 2039 2039 HOH HOH . F 5 HOH P 40 2040 2040 HOH HOH . F 5 HOH P 41 2041 2041 HOH HOH . F 5 HOH P 42 2042 2042 HOH HOH . F 5 HOH P 43 2043 2043 HOH HOH . F 5 HOH P 44 2044 2044 HOH HOH . F 5 HOH P 45 2045 2045 HOH HOH . F 5 HOH P 46 2046 2046 HOH HOH . F 5 HOH P 47 2047 2047 HOH HOH . F 5 HOH P 48 2048 2048 HOH HOH . F 5 HOH P 49 2049 2049 HOH HOH . F 5 HOH P 50 2050 2050 HOH HOH . F 5 HOH P 51 2051 2051 HOH HOH . F 5 HOH P 52 2052 2052 HOH HOH . F 5 HOH P 53 2053 2053 HOH HOH . F 5 HOH P 54 2054 2054 HOH HOH . F 5 HOH P 55 2055 2055 HOH HOH . F 5 HOH P 56 2056 2056 HOH HOH . F 5 HOH P 57 2057 2057 HOH HOH . F 5 HOH P 58 2058 2058 HOH HOH . F 5 HOH P 59 2059 2059 HOH HOH . F 5 HOH P 60 2060 2060 HOH HOH . F 5 HOH P 61 2061 2061 HOH HOH . F 5 HOH P 62 2062 2062 HOH HOH . F 5 HOH P 63 2063 2063 HOH HOH . F 5 HOH P 64 2064 2064 HOH HOH . F 5 HOH P 65 2065 2065 HOH HOH . F 5 HOH P 66 2066 2066 HOH HOH . F 5 HOH P 67 2067 2067 HOH HOH . F 5 HOH P 68 2068 2068 HOH HOH . F 5 HOH P 69 2069 2069 HOH HOH . F 5 HOH P 70 2070 2070 HOH HOH . F 5 HOH P 71 2071 2071 HOH HOH . F 5 HOH P 72 2072 2072 HOH HOH . F 5 HOH P 73 2073 2073 HOH HOH . F 5 HOH P 74 2074 2074 HOH HOH . F 5 HOH P 75 2075 2075 HOH HOH . F 5 HOH P 76 2076 2076 HOH HOH . F 5 HOH P 77 2077 2077 HOH HOH . F 5 HOH P 78 2078 2078 HOH HOH . F 5 HOH P 79 2079 2079 HOH HOH . F 5 HOH P 80 2080 2080 HOH HOH . F 5 HOH P 81 2081 2081 HOH HOH . F 5 HOH P 82 2082 2082 HOH HOH . F 5 HOH P 83 2083 2083 HOH HOH . F 5 HOH P 84 2084 2084 HOH HOH . F 5 HOH P 85 2085 2085 HOH HOH . F 5 HOH P 86 2086 2086 HOH HOH . F 5 HOH P 87 2087 2087 HOH HOH . F 5 HOH P 88 2088 2088 HOH HOH . F 5 HOH P 89 2089 2089 HOH HOH . F 5 HOH P 90 2090 2090 HOH HOH . F 5 HOH P 91 2091 2091 HOH HOH . F 5 HOH P 92 2092 2092 HOH HOH . F 5 HOH P 93 2093 2093 HOH HOH . F 5 HOH P 94 2094 2094 HOH HOH . F 5 HOH P 95 2095 2095 HOH HOH . F 5 HOH P 96 2096 2096 HOH HOH . F 5 HOH P 97 2097 2097 HOH HOH . F 5 HOH P 98 2098 2098 HOH HOH . F 5 HOH P 99 2099 2099 HOH HOH . F 5 HOH P 100 2100 2100 HOH HOH . F 5 HOH P 101 2101 2101 HOH HOH . F 5 HOH P 102 2102 2102 HOH HOH . F 5 HOH P 103 2103 2103 HOH HOH . F 5 HOH P 104 2104 2104 HOH HOH . F 5 HOH P 105 2105 2105 HOH HOH . F 5 HOH P 106 2106 2106 HOH HOH . F 5 HOH P 107 2107 2107 HOH HOH . F 5 HOH P 108 2108 2108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 -19.982 42.575 19.457 1 33.81 ? C1 BME 314 P 1 HETATM 2 C C2 BME . . . D 3 -18.641 43.303 19.55 1 31.45 ? C2 BME 314 P 1 HETATM 3 O O1 BME . . . D 3 -19.704 41.217 19.113 1 38.04 ? O1 BME 314 P 1 HETATM 4 S S2 BME . . . D 3 -18.919 45.07 19.885 1 29.32 ? S2 BME 314 P 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #