data_1E3C # _model_server_result.job_id BBnxh8UF-3QwE9UkaOE2wQ _model_server_result.datetime_utc '2024-12-16 23:36:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":603}' # _entry.id 1E3C # _exptl.entry_id 1E3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1E3C _cell.length_a 131.8 _cell.length_b 131.8 _cell.length_c 192.1 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 A 1 NAG P 601 NDG 2 n B NAG 2 A 2 NAG P 602 NDG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 138 P CYS 156 1_555 A SG CYS 154 P CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? disulf ? disulf2 A SG CYS 143 P CYS 161 1_555 A SG CYS 150 P CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? disulf ? disulf3 A SG CYS 282 P CYS 300 1_555 A SG CYS 396 P CYS 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf4 A SG CYS 470 P CYS 488 1_555 A SG CYS 482 P CYS 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 A SG CYS 471 P CYS 489 1_555 A SG CYS 484 P CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf6 A SG CYS 475 P CYS 493 1_555 A SG CYS 481 P CYS 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? covale ? covale1 A ND2 ASN 166 P ASN 184 1_555 B C1 NAG . A NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? covale ? covale2 B O4 NAG . A NAG 1 1_555 B C1 NAG . A NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? metalc ? metalc1 A OD1 ASP 11 P ASP 29 1_555 C MG MG . P MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc2 A OD1 ASP 12 P ASP 30 1_555 C MG MG . P MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc3 A OD1 ASP 263 P ASP 281 1_555 C MG MG . P MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? metalc ? metalc4 A OD2 ASP 263 P ASP 281 1_555 C MG MG . P MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc5 A OD1 ASN 264 P ASN 282 1_555 C MG MG . P MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1E3C _atom_sites.fract_transf_matrix[1][1] 0.007587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG P 1 603 603 MG MG . D 4 HOH P 1 2001 2001 HOH HOH . D 4 HOH P 2 2002 2002 HOH HOH . D 4 HOH P 3 2003 2003 HOH HOH . D 4 HOH P 4 2004 2004 HOH HOH . D 4 HOH P 5 2005 2005 HOH HOH . D 4 HOH P 6 2006 2006 HOH HOH . D 4 HOH P 7 2007 2007 HOH HOH . D 4 HOH P 8 2008 2008 HOH HOH . D 4 HOH P 9 2009 2009 HOH HOH . D 4 HOH P 10 2010 2010 HOH HOH . D 4 HOH P 11 2011 2011 HOH HOH . D 4 HOH P 12 2012 2012 HOH HOH . D 4 HOH P 13 2013 2013 HOH HOH . D 4 HOH P 14 2014 2014 HOH HOH . D 4 HOH P 15 2015 2015 HOH HOH . D 4 HOH P 16 2016 2016 HOH HOH . D 4 HOH P 17 2017 2017 HOH HOH . D 4 HOH P 18 2018 2018 HOH HOH . D 4 HOH P 19 2019 2019 HOH HOH . D 4 HOH P 20 2020 2020 HOH HOH . D 4 HOH P 21 2021 2021 HOH HOH . D 4 HOH P 22 2022 2022 HOH HOH . D 4 HOH P 23 2023 2023 HOH HOH . D 4 HOH P 24 2024 2024 HOH HOH . D 4 HOH P 25 2025 2025 HOH HOH . D 4 HOH P 26 2026 2026 HOH HOH . D 4 HOH P 27 2027 2027 HOH HOH . D 4 HOH P 28 2028 2028 HOH HOH . D 4 HOH P 29 2029 2029 HOH HOH . D 4 HOH P 30 2030 2030 HOH HOH . D 4 HOH P 31 2031 2031 HOH HOH . D 4 HOH P 32 2032 2032 HOH HOH . D 4 HOH P 33 2033 2033 HOH HOH . D 4 HOH P 34 2034 2034 HOH HOH . D 4 HOH P 35 2035 2035 HOH HOH . D 4 HOH P 36 2036 2036 HOH HOH . D 4 HOH P 37 2037 2037 HOH HOH . D 4 HOH P 38 2038 2038 HOH HOH . D 4 HOH P 39 2039 2039 HOH HOH . D 4 HOH P 40 2040 2040 HOH HOH . D 4 HOH P 41 2041 2041 HOH HOH . D 4 HOH P 42 2042 2042 HOH HOH . D 4 HOH P 43 2043 2043 HOH HOH . D 4 HOH P 44 2044 2044 HOH HOH . D 4 HOH P 45 2045 2045 HOH HOH . D 4 HOH P 46 2046 2046 HOH HOH . D 4 HOH P 47 2047 2047 HOH HOH . D 4 HOH P 48 2048 2048 HOH HOH . D 4 HOH P 49 2049 2049 HOH HOH . D 4 HOH P 50 2050 2050 HOH HOH . D 4 HOH P 51 2051 2051 HOH HOH . D 4 HOH P 52 2052 2052 HOH HOH . D 4 HOH P 53 2053 2053 HOH HOH . D 4 HOH P 54 2054 2054 HOH HOH . D 4 HOH P 55 2055 2055 HOH HOH . D 4 HOH P 56 2056 2056 HOH HOH . D 4 HOH P 57 2057 2057 HOH HOH . D 4 HOH P 58 2058 2058 HOH HOH . D 4 HOH P 59 2059 2059 HOH HOH . D 4 HOH P 60 2060 2060 HOH HOH . D 4 HOH P 61 2061 2061 HOH HOH . D 4 HOH P 62 2062 2062 HOH HOH . D 4 HOH P 63 2063 2063 HOH HOH . D 4 HOH P 64 2064 2064 HOH HOH . D 4 HOH P 65 2065 2065 HOH HOH . D 4 HOH P 66 2066 2066 HOH HOH . D 4 HOH P 67 2067 2067 HOH HOH . D 4 HOH P 68 2068 2068 HOH HOH . D 4 HOH P 69 2069 2069 HOH HOH . D 4 HOH P 70 2070 2070 HOH HOH . D 4 HOH P 71 2071 2071 HOH HOH . D 4 HOH P 72 2072 2072 HOH HOH . D 4 HOH P 73 2073 2073 HOH HOH . D 4 HOH P 74 2074 2074 HOH HOH . D 4 HOH P 75 2075 2075 HOH HOH . D 4 HOH P 76 2076 2076 HOH HOH . D 4 HOH P 77 2077 2077 HOH HOH . D 4 HOH P 78 2078 2078 HOH HOH . D 4 HOH P 79 2079 2079 HOH HOH . D 4 HOH P 80 2080 2080 HOH HOH . D 4 HOH P 81 2081 2081 HOH HOH . D 4 HOH P 82 2082 2082 HOH HOH . D 4 HOH P 83 2083 2083 HOH HOH . D 4 HOH P 84 2084 2084 HOH HOH . D 4 HOH P 85 2085 2085 HOH HOH . D 4 HOH P 86 2086 2086 HOH HOH . D 4 HOH P 87 2087 2087 HOH HOH . D 4 HOH P 88 2088 2088 HOH HOH . D 4 HOH P 89 2089 2089 HOH HOH . D 4 HOH P 90 2090 2090 HOH HOH . D 4 HOH P 91 2091 2091 HOH HOH . D 4 HOH P 92 2092 2092 HOH HOH . D 4 HOH P 93 2093 2093 HOH HOH . D 4 HOH P 94 2094 2094 HOH HOH . D 4 HOH P 95 2095 2095 HOH HOH . D 4 HOH P 96 2096 2096 HOH HOH . D 4 HOH P 97 2097 2097 HOH HOH . D 4 HOH P 98 2098 2098 HOH HOH . D 4 HOH P 99 2099 2099 HOH HOH . D 4 HOH P 100 2100 2100 HOH HOH . D 4 HOH P 101 2101 2101 HOH HOH . D 4 HOH P 102 2102 2102 HOH HOH . D 4 HOH P 103 2103 2103 HOH HOH . D 4 HOH P 104 2104 2104 HOH HOH . D 4 HOH P 105 2105 2105 HOH HOH . D 4 HOH P 106 2106 2106 HOH HOH . D 4 HOH P 107 2107 2107 HOH HOH . D 4 HOH P 108 2108 2108 HOH HOH . D 4 HOH P 109 2109 2109 HOH HOH . D 4 HOH P 110 2110 2110 HOH HOH . D 4 HOH P 111 2111 2111 HOH HOH . D 4 HOH P 112 2112 2112 HOH HOH . D 4 HOH P 113 2113 2113 HOH HOH . D 4 HOH P 114 2114 2114 HOH HOH . D 4 HOH P 115 2115 2115 HOH HOH . D 4 HOH P 116 2116 2116 HOH HOH . D 4 HOH P 117 2117 2117 HOH HOH . D 4 HOH P 118 2118 2118 HOH HOH . D 4 HOH P 119 2119 2119 HOH HOH . D 4 HOH P 120 2120 2120 HOH HOH . D 4 HOH P 121 2121 2121 HOH HOH . D 4 HOH P 122 2122 2122 HOH HOH . D 4 HOH P 123 2123 2123 HOH HOH . D 4 HOH P 124 2124 2124 HOH HOH . D 4 HOH P 125 2125 2125 HOH HOH . D 4 HOH P 126 2126 2126 HOH HOH . D 4 HOH P 127 2127 2127 HOH HOH . D 4 HOH P 128 2128 2128 HOH HOH . D 4 HOH P 129 2129 2129 HOH HOH . D 4 HOH P 130 2130 2130 HOH HOH . D 4 HOH P 131 2131 2131 HOH HOH . D 4 HOH P 132 2132 2132 HOH HOH . D 4 HOH P 133 2133 2133 HOH HOH . D 4 HOH P 134 2134 2134 HOH HOH . D 4 HOH P 135 2135 2135 HOH HOH . D 4 HOH P 136 2136 2136 HOH HOH . D 4 HOH P 137 2137 2137 HOH HOH . D 4 HOH P 138 2138 2138 HOH HOH . D 4 HOH P 139 2139 2139 HOH HOH . D 4 HOH P 140 2140 2140 HOH HOH . D 4 HOH P 141 2141 2141 HOH HOH . D 4 HOH P 142 2142 2142 HOH HOH . D 4 HOH P 143 2143 2143 HOH HOH . D 4 HOH P 144 2144 2144 HOH HOH . D 4 HOH P 145 2145 2145 HOH HOH . D 4 HOH P 146 2146 2146 HOH HOH . D 4 HOH P 147 2147 2147 HOH HOH . D 4 HOH P 148 2148 2148 HOH HOH . D 4 HOH P 149 2149 2149 HOH HOH . D 4 HOH P 150 2150 2150 HOH HOH . D 4 HOH P 151 2151 2151 HOH HOH . D 4 HOH P 152 2152 2152 HOH HOH . D 4 HOH P 153 2153 2153 HOH HOH . D 4 HOH P 154 2154 2154 HOH HOH . D 4 HOH P 155 2155 2155 HOH HOH . D 4 HOH P 156 2156 2156 HOH HOH . D 4 HOH P 157 2157 2157 HOH HOH . D 4 HOH P 158 2158 2158 HOH HOH . D 4 HOH P 159 2159 2159 HOH HOH . D 4 HOH P 160 2160 2160 HOH HOH . D 4 HOH P 161 2161 2161 HOH HOH . D 4 HOH P 162 2162 2162 HOH HOH . D 4 HOH P 163 2163 2163 HOH HOH . D 4 HOH P 164 2164 2164 HOH HOH . D 4 HOH P 165 2165 2165 HOH HOH . D 4 HOH P 166 2166 2166 HOH HOH . D 4 HOH P 167 2167 2167 HOH HOH . D 4 HOH P 168 2168 2168 HOH HOH . D 4 HOH P 169 2169 2169 HOH HOH . D 4 HOH P 170 2170 2170 HOH HOH . D 4 HOH P 171 2171 2171 HOH HOH . D 4 HOH P 172 2172 2172 HOH HOH . D 4 HOH P 173 2173 2173 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.723 _atom_site.Cartn_y 36.016 _atom_site.Cartn_z -18.467 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 603 _atom_site.auth_asym_id P _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 1 #