data_1E48 # _model_server_result.job_id KZs6fP7K1Iqjvd2B-38R0A _model_server_result.datetime_utc '2024-11-23 01:41:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e48 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 1E48 # _exptl.entry_id 1E48 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 170.058 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-DIHYDROXYACETONEPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1E48 _cell.length_a 93.7 _cell.length_b 93.7 _cell.length_c 43.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 46.85 46.85 0 3 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -46.85 46.85 0 4 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 93.7 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 14 P CYS 14 1_555 B S2 BME . P BME 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A NE2 HIS 92 P HIS 92 1_555 D ZN ZN . P ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc2 A NE2 HIS 94 P HIS 94 1_555 D ZN ZN . P ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc3 A NE2 HIS 155 P HIS 155 1_555 D ZN ZN . P ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc4 C O2 13P . P 13P 302 1_555 D ZN ZN . P ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? # _chem_comp.formula 'C3 H7 O6 P' _chem_comp.formula_weight 170.058 _chem_comp.id 13P _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-DIHYDROXYACETONEPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1E48 _atom_sites.fract_transf_matrix[1][1] 0.010672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023148 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BME P 1 301 314 BME BME . C 3 13P P 1 302 600 13P 13P . D 4 ZN P 1 303 999 ZN ZN . E 5 HOH P 1 401 2047 HOH HOH . E 5 HOH P 2 402 2007 HOH HOH . E 5 HOH P 3 403 2054 HOH HOH . E 5 HOH P 4 404 2009 HOH HOH . E 5 HOH P 5 405 2006 HOH HOH . E 5 HOH P 6 406 2050 HOH HOH . E 5 HOH P 7 407 2097 HOH HOH . E 5 HOH P 8 408 2045 HOH HOH . E 5 HOH P 9 409 2001 HOH HOH . E 5 HOH P 10 410 2074 HOH HOH . E 5 HOH P 11 411 2042 HOH HOH . E 5 HOH P 12 412 2070 HOH HOH . E 5 HOH P 13 413 2003 HOH HOH . E 5 HOH P 14 414 2011 HOH HOH . E 5 HOH P 15 415 2061 HOH HOH . E 5 HOH P 16 416 2059 HOH HOH . E 5 HOH P 17 417 2056 HOH HOH . E 5 HOH P 18 418 2038 HOH HOH . E 5 HOH P 19 419 2095 HOH HOH . E 5 HOH P 20 420 2051 HOH HOH . E 5 HOH P 21 421 2005 HOH HOH . E 5 HOH P 22 422 2034 HOH HOH . E 5 HOH P 23 423 2055 HOH HOH . E 5 HOH P 24 424 2086 HOH HOH . E 5 HOH P 25 425 2035 HOH HOH . E 5 HOH P 26 426 2023 HOH HOH . E 5 HOH P 27 427 2037 HOH HOH . E 5 HOH P 28 428 2079 HOH HOH . E 5 HOH P 29 429 2039 HOH HOH . E 5 HOH P 30 430 2067 HOH HOH . E 5 HOH P 31 431 2084 HOH HOH . E 5 HOH P 32 432 2010 HOH HOH . E 5 HOH P 33 433 2065 HOH HOH . E 5 HOH P 34 434 2018 HOH HOH . E 5 HOH P 35 435 2015 HOH HOH . E 5 HOH P 36 436 2091 HOH HOH . E 5 HOH P 37 437 2077 HOH HOH . E 5 HOH P 38 438 2090 HOH HOH . E 5 HOH P 39 439 2002 HOH HOH . E 5 HOH P 40 440 2069 HOH HOH . E 5 HOH P 41 441 2060 HOH HOH . E 5 HOH P 42 442 2087 HOH HOH . E 5 HOH P 43 443 2106 HOH HOH . E 5 HOH P 44 444 2066 HOH HOH . E 5 HOH P 45 445 2029 HOH HOH . E 5 HOH P 46 446 2004 HOH HOH . E 5 HOH P 47 447 2049 HOH HOH . E 5 HOH P 48 448 2071 HOH HOH . E 5 HOH P 49 449 2046 HOH HOH . E 5 HOH P 50 450 2083 HOH HOH . E 5 HOH P 51 451 2014 HOH HOH . E 5 HOH P 52 452 2101 HOH HOH . E 5 HOH P 53 453 2072 HOH HOH . E 5 HOH P 54 454 2092 HOH HOH . E 5 HOH P 55 455 2100 HOH HOH . E 5 HOH P 56 456 2089 HOH HOH . E 5 HOH P 57 457 2024 HOH HOH . E 5 HOH P 58 458 2021 HOH HOH . E 5 HOH P 59 459 2031 HOH HOH . E 5 HOH P 60 460 2076 HOH HOH . E 5 HOH P 61 461 2052 HOH HOH . E 5 HOH P 62 462 2082 HOH HOH . E 5 HOH P 63 463 2053 HOH HOH . E 5 HOH P 64 464 2044 HOH HOH . E 5 HOH P 65 465 2105 HOH HOH . E 5 HOH P 66 466 2075 HOH HOH . E 5 HOH P 67 467 2078 HOH HOH . E 5 HOH P 68 468 2027 HOH HOH . E 5 HOH P 69 469 2068 HOH HOH . E 5 HOH P 70 470 2058 HOH HOH . E 5 HOH P 71 471 2040 HOH HOH . E 5 HOH P 72 472 2048 HOH HOH . E 5 HOH P 73 473 2093 HOH HOH . E 5 HOH P 74 474 2081 HOH HOH . E 5 HOH P 75 475 2043 HOH HOH . E 5 HOH P 76 476 2001 HOH HOH . E 5 HOH P 77 477 2063 HOH HOH . E 5 HOH P 78 478 2102 HOH HOH . E 5 HOH P 79 479 2013 HOH HOH . E 5 HOH P 80 480 2085 HOH HOH . E 5 HOH P 81 481 2032 HOH HOH . E 5 HOH P 82 482 2098 HOH HOH . E 5 HOH P 83 483 2080 HOH HOH . E 5 HOH P 84 484 2062 HOH HOH . E 5 HOH P 85 485 2033 HOH HOH . E 5 HOH P 86 486 2073 HOH HOH . E 5 HOH P 87 487 2096 HOH HOH . E 5 HOH P 88 488 2103 HOH HOH . E 5 HOH P 89 489 2041 HOH HOH . E 5 HOH P 90 490 2094 HOH HOH . E 5 HOH P 91 491 2057 HOH HOH . E 5 HOH P 92 492 2008 HOH HOH . E 5 HOH P 93 493 2019 HOH HOH . E 5 HOH P 94 494 2030 HOH HOH . E 5 HOH P 95 495 2088 HOH HOH . E 5 HOH P 96 496 2104 HOH HOH . E 5 HOH P 97 497 2064 HOH HOH . E 5 HOH P 98 498 2099 HOH HOH . E 5 HOH P 99 499 2022 HOH HOH . E 5 HOH P 100 500 2012 HOH HOH . E 5 HOH P 101 501 2016 HOH HOH . E 5 HOH P 102 502 2025 HOH HOH . E 5 HOH P 103 503 2004 HOH HOH . E 5 HOH P 104 504 2036 HOH HOH . E 5 HOH P 105 505 2020 HOH HOH . E 5 HOH P 106 506 2017 HOH HOH . E 5 HOH P 107 507 2003 HOH HOH . E 5 HOH P 108 508 2028 HOH HOH . E 5 HOH P 109 509 2002 HOH HOH . E 5 HOH P 110 510 2026 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 13P . . . C 3 -22.885 38.916 24.113 0.7 34.18 ? P 13P 302 P 1 HETATM 2 O O1P 13P . . . C 3 -24.164 37.956 24.16 0.7 31.82 ? O1P 13P 302 P 1 HETATM 3 O O2P 13P . . . C 3 -23.337 40.319 23.504 0.7 30.42 ? O2P 13P 302 P 1 HETATM 4 O O3P 13P . . . C 3 -21.723 38.268 23.189 0.7 32.77 ? O3P 13P 302 P 1 HETATM 5 O O1 13P . . . C 3 -22.218 39.147 25.57 0.7 31.18 ? O1 13P 302 P 1 HETATM 6 C C1 13P . . . C 3 -22.494 38.606 26.877 0.7 28.38 ? C1 13P 302 P 1 HETATM 7 C C2 13P . . . C 3 -22.138 39.686 27.867 0.7 26.63 ? C2 13P 302 P 1 HETATM 8 O O2 13P . . . C 3 -21.954 39.621 29.173 0.7 24.9 ? O2 13P 302 P 1 HETATM 9 C C3 13P . . . C 3 -21.967 40.929 27.339 0.7 25.57 ? C3 13P 302 P 1 HETATM 10 O O3 13P . . . C 3 -21.658 41.815 28.243 0.7 21.6 ? O3 13P 302 P 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #