data_1E6V # _model_server_result.job_id 2wBclHvXyjHWkWZ9apn5qQ _model_server_result.datetime_utc '2024-11-13 11:01:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1553}' # _entry.id 1E6V # _exptl.entry_id 1E6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 906.58 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FACTOR 430' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1E6V _cell.length_a 80.519 _cell.length_b 115.74 _cell.length_c 268.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 150 A GLN 150 1_555 G NI F43 . A F43 1553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc2 G NI F43 . A F43 1553 1_555 I S1 COM . A COM 1555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc3 D OE1 GLN 150 D GLN 150 1_555 J NI F43 . D F43 1553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 J NI F43 . D F43 1553 1_555 L S1 COM . D COM 1555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? # _chem_comp.formula 'C42 H51 N6 Ni O13 1' _chem_comp.formula_weight 906.58 _chem_comp.id F43 _chem_comp.mon_nstd_flag . _chem_comp.name 'FACTOR 430' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NI NA F43 sing 95 n n NI NB F43 sing 96 n n NI NC F43 sing 97 n n NI ND F43 sing 98 n n NA C1A F43 doub 99 n n NA C4A F43 sing 100 n n CHA C1A F43 sing 101 n n CHA C4D F43 sing 102 n n C1A C2A F43 sing 103 n n C2A C3A F43 sing 104 n n C2A C5A F43 sing 105 n n C2A C9A F43 sing 106 n n C3A C4A F43 sing 107 n n C3A CAA F43 sing 108 n n C4A CHB F43 sing 109 n n C5A C6A F43 sing 110 n n C6A O7A F43 doub 111 n n C6A N8A F43 sing 112 n n CAA CBA F43 sing 113 n n CBA CCA F43 sing 114 n n CCA ODA F43 sing 115 n n CCA OEA F43 doub 116 n n NB C1B F43 sing 117 n n NB C4B F43 doub 118 n n CHB C1B F43 sing 119 n n C1B C2B F43 sing 120 n n C1B N5B F43 sing 121 n n C2B C3B F43 sing 122 n n C2B C8B F43 sing 123 n n C2B C9B F43 sing 124 n n C3B C4B F43 sing 125 n n C3B CAB F43 sing 126 n n C4B CHC F43 sing 127 n n N5B C6B F43 sing 128 n n C6B O7B F43 doub 129 n n C6B C8B F43 sing 130 n n CAB CBB F43 sing 131 n n CBB CCB F43 sing 132 n n CCB ODB F43 doub 133 n n CCB OEB F43 sing 134 n n NC C1C F43 sing 135 n n NC C4C F43 sing 136 n n CHC C1C F43 doub 137 n n C1C C2C F43 sing 138 n n C2C C3C F43 sing 139 n n C2C C5C F43 sing 140 n n C3C C4C F43 sing 141 n n C3C C8C F43 sing 142 n n C4C CHD F43 doub 143 n n C5C C6C F43 sing 144 n n C6C O7C F43 doub 145 n n C6C O8C F43 sing 146 n n C8C C9C F43 sing 147 n n C9C CAC F43 sing 148 n n CAC OBC F43 sing 149 n n CAC OCC F43 doub 150 n n ND C1D F43 doub 151 n n ND C4D F43 sing 152 n n CHD C7D F43 sing 153 n n CHD C1D F43 sing 154 n n C5D C6D F43 sing 155 n n C5D C2D F43 sing 156 n n C6D C7D F43 sing 157 n n C7D O8D F43 doub 158 n n C9D CAD F43 sing 159 n n C9D C3D F43 sing 160 n n CAD OBD F43 doub 161 n n CAD OCD F43 sing 162 n n C1D C2D F43 sing 163 n n C2D C3D F43 sing 164 n n C3D C4D F43 sing 165 n n C4A H4A F43 sing 166 n n CHA HHA1 F43 sing 167 n n CHA HHA2 F43 sing 168 n n C4D H4D F43 sing 169 n n C3A H3A F43 sing 170 n n C5A H5A1 F43 sing 171 n n C5A H5A2 F43 sing 172 n n C9A H9A1 F43 sing 173 n n C9A H9A2 F43 sing 174 n n C9A H9A3 F43 sing 175 n n CAA HAA1 F43 sing 176 n n CAA HAA2 F43 sing 177 n n CHB HHB1 F43 sing 178 n n CHB HHB2 F43 sing 179 n n N8A H8A1 F43 sing 180 n n N8A H8A2 F43 sing 181 n n CBA HBA1 F43 sing 182 n n CBA HBA2 F43 sing 183 n n ODA HDA F43 sing 184 n n N5B H5B F43 sing 185 n n C3B H3B F43 sing 186 n n C8B H8B1 F43 sing 187 n n C8B H8B2 F43 sing 188 n n C9B H9B1 F43 sing 189 n n C9B H9B2 F43 sing 190 n n C9B H9B3 F43 sing 191 n n CAB HAB1 F43 sing 192 n n CAB HAB2 F43 sing 193 n n CHC HHC F43 sing 194 n n CBB HBB1 F43 sing 195 n n CBB HBB2 F43 sing 196 n n OEB HEB F43 sing 197 n n C2C H2C F43 sing 198 n n C3C H3C F43 sing 199 n n C5C H5C1 F43 sing 200 n n C5C H5C2 F43 sing 201 n n C8C H8C1 F43 sing 202 n n C8C H8C2 F43 sing 203 n n O8C H8C F43 sing 204 n n C9C H9C1 F43 sing 205 n n C9C H9C2 F43 sing 206 n n OBC HBC F43 sing 207 n n C5D H5D1 F43 sing 208 n n C5D H5D2 F43 sing 209 n n C6D H6D1 F43 sing 210 n n C6D H6D2 F43 sing 211 n n C2D H2D F43 sing 212 n n C9D H9D1 F43 sing 213 n n C9D H9D2 F43 sing 214 n n C3D H3D F43 sing 215 n n OCD HCD F43 sing 216 n n # _atom_sites.entry_id 1E6V _atom_sites.fract_transf_matrix[1][1] 0.012419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00864 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003724 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 F43 A 1 1553 1553 F43 F43 . H 5 TP7 A 1 1554 1554 TP7 TP7 . I 6 COM A 1 1555 1555 COM COM . J 4 F43 D 1 1553 1553 F43 F43 . K 5 TP7 D 1 1554 1554 TP7 TP7 . L 6 COM D 1 1555 1555 COM COM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 NI NI F43 . . . J 4 64.59 9.071 113.534 1 26.25 ? NI F43 1553 D 1 HETATM 2 N NA F43 . . . J 4 64.982 7.026 114.044 1 26.07 ? NA F43 1553 D 1 HETATM 3 C CHA F43 . . . J 4 62.596 6.677 114.702 1 26.11 ? CHA F43 1553 D 1 HETATM 4 C C1A F43 . . . J 4 64.077 6.437 114.654 1 26.21 ? C1A F43 1553 D 1 HETATM 5 C C2A F43 . . . J 4 64.628 5.199 115.552 1 26.15 ? C2A F43 1553 D 1 HETATM 6 C C3A F43 . . . J 4 66.129 5.693 115.635 1 25.92 ? C3A F43 1553 D 1 HETATM 7 C C4A F43 . . . J 4 66.257 6.39 114.313 1 26 ? C4A F43 1553 D 1 HETATM 8 C C5A F43 . . . J 4 64.58 3.86 114.749 1 26.29 ? C5A F43 1553 D 1 HETATM 9 C C6A F43 . . . J 4 65.11 2.695 115.584 1 26.47 ? C6A F43 1553 D 1 HETATM 10 O O7A F43 . . . J 4 64.381 2.201 116.499 1 26.54 ? O7A F43 1553 D 1 HETATM 11 N N8A F43 . . . J 4 66.294 2.205 115.381 1 26.39 ? N8A F43 1553 D 1 HETATM 12 C C9A F43 . . . J 4 63.896 5.137 116.861 1 26.23 ? C9A F43 1553 D 1 HETATM 13 C CAA F43 . . . J 4 66.477 6.658 116.902 1 25.81 ? CAA F43 1553 D 1 HETATM 14 C CBA F43 . . . J 4 66.598 5.878 118.181 1 25.24 ? CBA F43 1553 D 1 HETATM 15 C CCA F43 . . . J 4 67.78 6.238 119.034 1 24.95 ? CCA F43 1553 D 1 HETATM 16 O ODA F43 . . . J 4 67.931 7.444 119.397 1 24.85 ? ODA F43 1553 D 1 HETATM 17 O OEA F43 . . . J 4 68.576 5.334 119.392 1 24.78 ? OEA F43 1553 D 1 HETATM 18 N NB F43 . . . J 4 66.534 9.108 112.753 1 26 ? NB F43 1553 D 1 HETATM 19 C CHB F43 . . . J 4 67.454 7.354 114.192 1 25.93 ? CHB F43 1553 D 1 HETATM 20 C C1B F43 . . . J 4 67.562 7.996 112.927 1 25.93 ? C1B F43 1553 D 1 HETATM 21 C C2B F43 . . . J 4 69.034 8.669 112.575 1 25.75 ? C2B F43 1553 D 1 HETATM 22 C C3B F43 . . . J 4 68.662 10.25 112.577 1 25.62 ? C3B F43 1553 D 1 HETATM 23 C C4B F43 . . . J 4 67.145 10.141 112.555 1 25.92 ? C4B F43 1553 D 1 HETATM 24 N N5B F43 . . . J 4 67.461 7.076 111.697 1 25.71 ? N5B F43 1553 D 1 HETATM 25 C C6B F43 . . . J 4 68.399 7.151 110.802 1 25.55 ? C6B F43 1553 D 1 HETATM 26 O O7B F43 . . . J 4 68.427 6.417 109.81 1 25.24 ? O7B F43 1553 D 1 HETATM 27 C C8B F43 . . . J 4 69.405 8.225 111.167 1 25.64 ? C8B F43 1553 D 1 HETATM 28 C C9B F43 . . . J 4 70.118 8.281 113.552 1 25.81 ? C9B F43 1553 D 1 HETATM 29 C CAB F43 . . . J 4 69.196 10.864 113.977 1 25.39 ? CAB F43 1553 D 1 HETATM 30 C CBB F43 . . . J 4 68.893 12.34 114.155 1 25.22 ? CBB F43 1553 D 1 HETATM 31 C CCB F43 . . . J 4 69.605 12.833 115.387 1 25.05 ? CCB F43 1553 D 1 HETATM 32 O ODB F43 . . . J 4 70.846 12.772 115.306 1 25.1 ? ODB F43 1553 D 1 HETATM 33 O OEB F43 . . . J 4 68.999 13.265 116.403 1 25.01 ? OEB F43 1553 D 1 HETATM 34 N NC F43 . . . J 4 64.291 11.095 113.26 1 26.07 ? NC F43 1553 D 1 HETATM 35 C CHC F43 . . . J 4 66.491 11.502 112.289 1 26 ? CHC F43 1553 D 1 HETATM 36 C C1C F43 . . . J 4 65.253 11.873 112.639 1 26.13 ? C1C F43 1553 D 1 HETATM 37 C C2C F43 . . . J 4 64.754 13.24 112.302 1 26.26 ? C2C F43 1553 D 1 HETATM 38 C C3C F43 . . . J 4 63.356 13.271 113.02 1 26.24 ? C3C F43 1553 D 1 HETATM 39 C C4C F43 . . . J 4 63.153 11.856 113.467 1 26.08 ? C4C F43 1553 D 1 HETATM 40 C C5C F43 . . . J 4 64.54 13.405 110.769 1 26.26 ? C5C F43 1553 D 1 HETATM 41 C C6C F43 . . . J 4 64.017 14.764 110.421 1 26.37 ? C6C F43 1553 D 1 HETATM 42 O O7C F43 . . . J 4 64.737 15.761 110.679 1 26.4 ? O7C F43 1553 D 1 HETATM 43 O O8C F43 . . . J 4 62.866 14.857 109.877 1 26.55 ? O8C F43 1553 D 1 HETATM 44 C C8C F43 . . . J 4 63.457 14.15 114.315 1 26.6 ? C8C F43 1553 D 1 HETATM 45 C C9C F43 . . . J 4 63.577 15.679 114.116 1 27.05 ? C9C F43 1553 D 1 HETATM 46 C CAC F43 . . . J 4 63.678 16.425 115.449 1 27.4 ? CAC F43 1553 D 1 HETATM 47 O OBC F43 . . . J 4 63.658 15.787 116.534 1 27.54 ? OBC F43 1553 D 1 HETATM 48 O OCC F43 . . . J 4 63.785 17.684 115.394 1 27.71 ? OCC F43 1553 D 1 HETATM 49 N ND F43 . . . J 4 62.907 9.172 114.607 1 26.08 ? ND F43 1553 D 1 HETATM 50 C CHD F43 . . . J 4 62.062 11.464 114.075 1 25.99 ? CHD F43 1553 D 1 HETATM 51 C C5D F43 . . . J 4 59.495 10.202 114.851 1 25.92 ? C5D F43 1553 D 1 HETATM 52 C C6D F43 . . . J 4 59.472 11.697 114.714 1 25.75 ? C6D F43 1553 D 1 HETATM 53 C C7D F43 . . . J 4 60.738 12.23 114.119 1 25.9 ? C7D F43 1553 D 1 HETATM 54 O O8D F43 . . . J 4 60.618 13.34 113.56 1 25.79 ? O8D F43 1553 D 1 HETATM 55 C C9D F43 . . . J 4 60.515 7.711 117.069 1 26.01 ? C9D F43 1553 D 1 HETATM 56 C CAD F43 . . . J 4 59.071 7.57 117.253 1 26.1 ? CAD F43 1553 D 1 HETATM 57 O OBD F43 . . . J 4 58.612 7.448 118.427 1 26.01 ? OBD F43 1553 D 1 HETATM 58 O OCD F43 . . . J 4 58.303 7.581 116.242 1 26.23 ? OCD F43 1553 D 1 HETATM 59 C C1D F43 . . . J 4 61.929 10.04 114.702 1 26.02 ? C1D F43 1553 D 1 HETATM 60 C C2D F43 . . . J 4 60.736 9.728 115.492 1 25.95 ? C2D F43 1553 D 1 HETATM 61 C C3D F43 . . . J 4 60.947 8.207 115.739 1 26.11 ? C3D F43 1553 D 1 HETATM 62 C C4D F43 . . . J 4 62.362 8.004 115.457 1 26.17 ? C4D F43 1553 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 62 #