data_1E7E # _model_server_result.job_id ZftfCHrSfCdSO9SRJmkxaw _model_server_result.datetime_utc '2024-11-22 23:44:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 1E7E # _exptl.entry_id 1E7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 172.265 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DECANOIC ACID' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.15 _cell.angle_gamma 90 _cell.entry_id 1E7E _cell.length_a 186.78 _cell.length_b 39.19 _cell.length_c 95.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? # _chem_comp.formula 'C10 H20 O2' _chem_comp.formula_weight 172.265 _chem_comp.id DKA _chem_comp.mon_nstd_flag . _chem_comp.name 'DECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 DKA doub 83 n n C1 C2 DKA sing 84 n n C1 O2 DKA sing 85 n n C2 C3 DKA sing 86 n n C2 H21 DKA sing 87 n n C2 H22 DKA sing 88 n n C3 C4 DKA sing 89 n n C3 H31 DKA sing 90 n n C3 H32 DKA sing 91 n n C4 C5 DKA sing 92 n n C4 H41 DKA sing 93 n n C4 H42 DKA sing 94 n n C5 C6 DKA sing 95 n n C5 H51 DKA sing 96 n n C5 H52 DKA sing 97 n n C6 C7 DKA sing 98 n n C6 H61 DKA sing 99 n n C6 H62 DKA sing 100 n n C7 C8 DKA sing 101 n n C7 H71 DKA sing 102 n n C7 H72 DKA sing 103 n n C8 C9 DKA sing 104 n n C8 H81 DKA sing 105 n n C8 H82 DKA sing 106 n n C9 C10 DKA sing 107 n n C9 H91 DKA sing 108 n n C9 H92 DKA sing 109 n n C10 H101 DKA sing 110 n n C10 H102 DKA sing 111 n n C10 H103 DKA sing 112 n n O2 HO2 DKA sing 113 n n # _atom_sites.entry_id 1E7E _atom_sites.fract_transf_matrix[1][1] 0.005354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00145 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DKA A 1 1001 1001 DKA DKA . C 2 DKA A 1 1002 1002 DKA DKA . D 2 DKA A 1 1003 1003 DKA DKA . E 2 DKA A 1 1004 1004 DKA DKA . F 2 DKA A 1 1005 1005 DKA DKA . G 2 DKA A 1 1006 1006 DKA DKA . H 2 DKA A 1 1007 1007 DKA DKA . I 2 DKA A 1 1008 1008 DKA DKA . J 2 DKA A 1 1009 1009 DKA DKA . K 2 DKA A 1 1010 1010 DKA DKA . L 3 HOH A 1 2001 2001 HOH HOH . L 3 HOH A 2 2002 2002 HOH HOH . L 3 HOH A 3 2003 2003 HOH HOH . L 3 HOH A 4 2004 2004 HOH HOH . L 3 HOH A 5 2005 2005 HOH HOH . L 3 HOH A 6 2006 2006 HOH HOH . L 3 HOH A 7 2007 2007 HOH HOH . L 3 HOH A 8 2008 2008 HOH HOH . L 3 HOH A 9 2009 2009 HOH HOH . L 3 HOH A 10 2010 2010 HOH HOH . L 3 HOH A 11 2011 2011 HOH HOH . L 3 HOH A 12 2012 2012 HOH HOH . L 3 HOH A 13 2013 2013 HOH HOH . L 3 HOH A 14 2014 2014 HOH HOH . L 3 HOH A 15 2015 2015 HOH HOH . L 3 HOH A 16 2016 2016 HOH HOH . L 3 HOH A 17 2017 2017 HOH HOH . L 3 HOH A 18 2018 2018 HOH HOH . L 3 HOH A 19 2019 2019 HOH HOH . L 3 HOH A 20 2020 2020 HOH HOH . L 3 HOH A 21 2021 2021 HOH HOH . L 3 HOH A 22 2022 2022 HOH HOH . L 3 HOH A 23 2023 2023 HOH HOH . L 3 HOH A 24 2024 2024 HOH HOH . L 3 HOH A 25 2025 2025 HOH HOH . L 3 HOH A 26 2026 2026 HOH HOH . L 3 HOH A 27 2027 2027 HOH HOH . L 3 HOH A 28 2028 2028 HOH HOH . L 3 HOH A 29 2029 2029 HOH HOH . L 3 HOH A 30 2030 2030 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DKA . . . C 2 42.805 16.034 14.161 1 58.57 ? C1 DKA 1002 A 1 HETATM 2 O O1 DKA . . . C 2 42.611 17.215 13.787 1 61.1 ? O1 DKA 1002 A 1 HETATM 3 C C2 DKA . . . C 2 44.245 15.533 14.325 1 55.68 ? C2 DKA 1002 A 1 HETATM 4 C C3 DKA . . . C 2 45.07 16.47 15.217 1 49.89 ? C3 DKA 1002 A 1 HETATM 5 C C4 DKA . . . C 2 45.452 15.611 16.407 1 47.31 ? C4 DKA 1002 A 1 HETATM 6 C C5 DKA . . . C 2 46.874 15.096 16.305 1 46.67 ? C5 DKA 1002 A 1 HETATM 7 C C6 DKA . . . C 2 47.199 14.163 17.46 1 45.56 ? C6 DKA 1002 A 1 HETATM 8 C C7 DKA . . . C 2 48.552 13.499 17.267 1 47.22 ? C7 DKA 1002 A 1 HETATM 9 C C8 DKA . . . C 2 48.766 12.379 18.27 1 46.49 ? C8 DKA 1002 A 1 HETATM 10 O O2 DKA . . . C 2 41.864 15.241 14.396 1 58.39 ? O2 DKA 1002 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #