data_1E7E
#
_model_server_result.job_id            IE3-PLV32gpooEKB0xuUWA 
_model_server_result.datetime_utc      '2024-10-12 15:32:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1e7e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1007}' 
#
_entry.id    1E7E 
#
_exptl.entry_id    1E7E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              172.265 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DECANOIC ACID' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.15 
_cell.angle_gamma         90 
_cell.entry_id            1E7E 
_cell.length_a            186.78 
_cell.length_b            39.19 
_cell.length_c            95.34 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1E7E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
#
_chem_comp.formula           'C10 H20 O2' 
_chem_comp.formula_weight    172.265 
_chem_comp.id                DKA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DECANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 DKA doub 83 n n 
C1 C2 DKA sing 84 n n 
C1 O2 DKA sing 85 n n 
C2 C3 DKA sing 86 n n 
C2 H21 DKA sing 87 n n 
C2 H22 DKA sing 88 n n 
C3 C4 DKA sing 89 n n 
C3 H31 DKA sing 90 n n 
C3 H32 DKA sing 91 n n 
C4 C5 DKA sing 92 n n 
C4 H41 DKA sing 93 n n 
C4 H42 DKA sing 94 n n 
C5 C6 DKA sing 95 n n 
C5 H51 DKA sing 96 n n 
C5 H52 DKA sing 97 n n 
C6 C7 DKA sing 98 n n 
C6 H61 DKA sing 99 n n 
C6 H62 DKA sing 100 n n 
C7 C8 DKA sing 101 n n 
C7 H71 DKA sing 102 n n 
C7 H72 DKA sing 103 n n 
C8 C9 DKA sing 104 n n 
C8 H81 DKA sing 105 n n 
C8 H82 DKA sing 106 n n 
C9 C10 DKA sing 107 n n 
C9 H91 DKA sing 108 n n 
C9 H92 DKA sing 109 n n 
C10 H101 DKA sing 110 n n 
C10 H102 DKA sing 111 n n 
C10 H103 DKA sing 112 n n 
O2 HO2 DKA sing 113 n n 
#
_atom_sites.entry_id                     1E7E 
_atom_sites.fract_transf_matrix[1][1]    0.005354 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00145 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025517 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010866 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DKA A 1 1001 1001 DKA DKA . 
C 2 DKA A 1 1002 1002 DKA DKA . 
D 2 DKA A 1 1003 1003 DKA DKA . 
E 2 DKA A 1 1004 1004 DKA DKA . 
F 2 DKA A 1 1005 1005 DKA DKA . 
G 2 DKA A 1 1006 1006 DKA DKA . 
H 2 DKA A 1 1007 1007 DKA DKA . 
I 2 DKA A 1 1008 1008 DKA DKA . 
J 2 DKA A 1 1009 1009 DKA DKA . 
K 2 DKA A 1 1010 1010 DKA DKA . 
L 3 HOH A 1 2001 2001 HOH HOH . 
L 3 HOH A 2 2002 2002 HOH HOH . 
L 3 HOH A 3 2003 2003 HOH HOH . 
L 3 HOH A 4 2004 2004 HOH HOH . 
L 3 HOH A 5 2005 2005 HOH HOH . 
L 3 HOH A 6 2006 2006 HOH HOH . 
L 3 HOH A 7 2007 2007 HOH HOH . 
L 3 HOH A 8 2008 2008 HOH HOH . 
L 3 HOH A 9 2009 2009 HOH HOH . 
L 3 HOH A 10 2010 2010 HOH HOH . 
L 3 HOH A 11 2011 2011 HOH HOH . 
L 3 HOH A 12 2012 2012 HOH HOH . 
L 3 HOH A 13 2013 2013 HOH HOH . 
L 3 HOH A 14 2014 2014 HOH HOH . 
L 3 HOH A 15 2015 2015 HOH HOH . 
L 3 HOH A 16 2016 2016 HOH HOH . 
L 3 HOH A 17 2017 2017 HOH HOH . 
L 3 HOH A 18 2018 2018 HOH HOH . 
L 3 HOH A 19 2019 2019 HOH HOH . 
L 3 HOH A 20 2020 2020 HOH HOH . 
L 3 HOH A 21 2021 2021 HOH HOH . 
L 3 HOH A 22 2022 2022 HOH HOH . 
L 3 HOH A 23 2023 2023 HOH HOH . 
L 3 HOH A 24 2024 2024 HOH HOH . 
L 3 HOH A 25 2025 2025 HOH HOH . 
L 3 HOH A 26 2026 2026 HOH HOH . 
L 3 HOH A 27 2027 2027 HOH HOH . 
L 3 HOH A 28 2028 2028 HOH HOH . 
L 3 HOH A 29 2029 2029 HOH HOH . 
L 3 HOH A 30 2030 2030 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DKA . . . H 2 34.594 12.783 11.385 1 70.12 ? C1 DKA 1007 A 1 
HETATM 2 C C2 DKA . . . H 2 35.554 13.321 10.323 1 76.69 ? C2 DKA 1007 A 1 
HETATM 3 C C3 DKA . . . H 2 35.787 14.827 10.514 1 78.27 ? C3 DKA 1007 A 1 
HETATM 4 C C4 DKA . . . H 2 36.627 15.269 9.309 1 77.52 ? C4 DKA 1007 A 1 
HETATM 5 C C5 DKA . . . H 2 35.776 15.496 8.048 1 78.65 ? C5 DKA 1007 A 1 
HETATM 6 C C6 DKA . . . H 2 34.966 16.791 8.103 1 76.64 ? C6 DKA 1007 A 1 
HETATM 7 C C7 DKA . . . H 2 33.689 16.705 7.264 1 74.31 ? C7 DKA 1007 A 1 
HETATM 8 C C8 DKA . . . H 2 32.441 16.996 8.095 1 72.05 ? C8 DKA 1007 A 1 
HETATM 9 C C9 DKA . . . H 2 31.297 16.07 7.71 1 71.72 ? C9 DKA 1007 A 1 
HETATM 10 C C10 DKA . . . H 2 30.373 15.813 8.884 1 71.55 ? C10 DKA 1007 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#