data_1E8D # _model_server_result.job_id hi3ajuPoHutYcHtMGa2hAg _model_server_result.datetime_utc '2024-11-12 21:42:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e8d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1259}' # _entry.id 1E8D # _exptl.entry_id 1E8D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 85.104 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-HYDROXY-2-METHYLPROPANENITRILE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1E8D _cell.length_a 105.9 _cell.length_b 105.9 _cell.length_c 187.8 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 187.8 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C4 H7 N O' _chem_comp.formula_weight 85.104 _chem_comp.id CNH _chem_comp.mon_nstd_flag . _chem_comp.name 2-HYDROXY-2-METHYLPROPANENITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ACETONE CYANOHYDRIN' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CNH sing 70 n n C1 C3 CNH sing 71 n n C1 C4 CNH sing 72 n n C1 O6 CNH sing 73 n n C2 HC21 CNH sing 74 n n C2 HC22 CNH sing 75 n n C2 HC23 CNH sing 76 n n C3 HC31 CNH sing 77 n n C3 HC32 CNH sing 78 n n C3 HC33 CNH sing 79 n n C4 N5 CNH trip 80 n n O6 HO6 CNH sing 81 n n # _atom_sites.entry_id 1E8D _atom_sites.fract_transf_matrix[1][1] 0.009443 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CNH A 1 1259 1259 CNH CNH . D 2 CNH A 1 1260 1260 CNH CNH . E 2 CNH A 1 1261 1261 CNH CNH . F 2 CNH B 1 1259 1259 CNH CNH . G 3 HOH A 1 2001 2001 HOH HOH . G 3 HOH A 2 2002 2002 HOH HOH . G 3 HOH A 3 2003 2003 HOH HOH . G 3 HOH A 4 2004 2004 HOH HOH . G 3 HOH A 5 2005 2005 HOH HOH . G 3 HOH A 6 2006 2006 HOH HOH . G 3 HOH A 7 2007 2007 HOH HOH . G 3 HOH A 8 2008 2008 HOH HOH . G 3 HOH A 9 2009 2009 HOH HOH . G 3 HOH A 10 2010 2010 HOH HOH . G 3 HOH A 11 2011 2011 HOH HOH . G 3 HOH A 12 2012 2012 HOH HOH . G 3 HOH A 13 2013 2013 HOH HOH . G 3 HOH A 14 2014 2014 HOH HOH . G 3 HOH A 15 2015 2015 HOH HOH . G 3 HOH A 16 2016 2016 HOH HOH . G 3 HOH A 17 2017 2017 HOH HOH . G 3 HOH A 18 2018 2018 HOH HOH . G 3 HOH A 19 2019 2019 HOH HOH . G 3 HOH A 20 2020 2020 HOH HOH . G 3 HOH A 21 2021 2021 HOH HOH . G 3 HOH A 22 2022 2022 HOH HOH . G 3 HOH A 23 2023 2023 HOH HOH . G 3 HOH A 24 2024 2024 HOH HOH . G 3 HOH A 25 2025 2025 HOH HOH . G 3 HOH A 26 2026 2026 HOH HOH . G 3 HOH A 27 2027 2027 HOH HOH . G 3 HOH A 28 2028 2028 HOH HOH . G 3 HOH A 29 2029 2029 HOH HOH . G 3 HOH A 30 2030 2030 HOH HOH . G 3 HOH A 31 2031 2031 HOH HOH . G 3 HOH A 32 2032 2032 HOH HOH . G 3 HOH A 33 2033 2033 HOH HOH . G 3 HOH A 34 2034 2034 HOH HOH . G 3 HOH A 35 2035 2035 HOH HOH . G 3 HOH A 36 2036 2036 HOH HOH . G 3 HOH A 37 2037 2037 HOH HOH . G 3 HOH A 38 2038 2038 HOH HOH . G 3 HOH A 39 2039 2039 HOH HOH . G 3 HOH A 40 2040 2040 HOH HOH . G 3 HOH A 41 2041 2041 HOH HOH . G 3 HOH A 42 2042 2042 HOH HOH . G 3 HOH A 43 2043 2043 HOH HOH . G 3 HOH A 44 2044 2044 HOH HOH . G 3 HOH A 45 2045 2045 HOH HOH . G 3 HOH A 46 2046 2046 HOH HOH . G 3 HOH A 47 2047 2047 HOH HOH . G 3 HOH A 48 2048 2048 HOH HOH . G 3 HOH A 49 2049 2049 HOH HOH . G 3 HOH A 50 2050 2050 HOH HOH . G 3 HOH A 51 2051 2051 HOH HOH . G 3 HOH A 52 2052 2052 HOH HOH . G 3 HOH A 53 2053 2053 HOH HOH . G 3 HOH A 54 2054 2054 HOH HOH . G 3 HOH A 55 2055 2055 HOH HOH . G 3 HOH A 56 2056 2056 HOH HOH . G 3 HOH A 57 2057 2057 HOH HOH . G 3 HOH A 58 2058 2058 HOH HOH . G 3 HOH A 59 2059 2059 HOH HOH . G 3 HOH A 60 2060 2060 HOH HOH . G 3 HOH A 61 2061 2061 HOH HOH . G 3 HOH A 62 2062 2062 HOH HOH . G 3 HOH A 63 2063 2063 HOH HOH . G 3 HOH A 64 2064 2064 HOH HOH . G 3 HOH A 65 2065 2065 HOH HOH . G 3 HOH A 66 2066 2066 HOH HOH . G 3 HOH A 67 2067 2067 HOH HOH . G 3 HOH A 68 2068 2068 HOH HOH . G 3 HOH A 69 2069 2069 HOH HOH . G 3 HOH A 70 2070 2070 HOH HOH . G 3 HOH A 71 2071 2071 HOH HOH . G 3 HOH A 72 2072 2072 HOH HOH . G 3 HOH A 73 2073 2073 HOH HOH . G 3 HOH A 74 2074 2074 HOH HOH . G 3 HOH A 75 2075 2075 HOH HOH . G 3 HOH A 76 2076 2076 HOH HOH . G 3 HOH A 77 2077 2077 HOH HOH . G 3 HOH A 78 2078 2078 HOH HOH . G 3 HOH A 79 2079 2079 HOH HOH . G 3 HOH A 80 2080 2080 HOH HOH . G 3 HOH A 81 2081 2081 HOH HOH . G 3 HOH A 82 2082 2082 HOH HOH . G 3 HOH A 83 2083 2083 HOH HOH . G 3 HOH A 84 2084 2084 HOH HOH . G 3 HOH A 85 2085 2085 HOH HOH . G 3 HOH A 86 2086 2086 HOH HOH . G 3 HOH A 87 2087 2087 HOH HOH . G 3 HOH A 88 2088 2088 HOH HOH . G 3 HOH A 89 2089 2089 HOH HOH . G 3 HOH A 90 2090 2090 HOH HOH . G 3 HOH A 91 2091 2091 HOH HOH . G 3 HOH A 92 2092 2092 HOH HOH . G 3 HOH A 93 2093 2093 HOH HOH . G 3 HOH A 94 2094 2094 HOH HOH . G 3 HOH A 95 2095 2095 HOH HOH . G 3 HOH A 96 2096 2096 HOH HOH . G 3 HOH A 97 2097 2097 HOH HOH . G 3 HOH A 98 2098 2098 HOH HOH . G 3 HOH A 99 2099 2099 HOH HOH . G 3 HOH A 100 2100 2100 HOH HOH . G 3 HOH A 101 2101 2101 HOH HOH . G 3 HOH A 102 2102 2102 HOH HOH . G 3 HOH A 103 2103 2103 HOH HOH . G 3 HOH A 104 2104 2104 HOH HOH . G 3 HOH A 105 2105 2105 HOH HOH . G 3 HOH A 106 2106 2106 HOH HOH . G 3 HOH A 107 2107 2107 HOH HOH . G 3 HOH A 108 2108 2108 HOH HOH . G 3 HOH A 109 2109 2109 HOH HOH . G 3 HOH A 110 2110 2110 HOH HOH . G 3 HOH A 111 2111 2111 HOH HOH . G 3 HOH A 112 2112 2112 HOH HOH . G 3 HOH A 113 2113 2113 HOH HOH . G 3 HOH A 114 2114 2114 HOH HOH . G 3 HOH A 115 2115 2115 HOH HOH . G 3 HOH A 116 2116 2116 HOH HOH . G 3 HOH A 117 2117 2117 HOH HOH . G 3 HOH A 118 2118 2118 HOH HOH . G 3 HOH A 119 2119 2119 HOH HOH . G 3 HOH A 120 2120 2120 HOH HOH . G 3 HOH A 121 2121 2121 HOH HOH . G 3 HOH A 122 2122 2122 HOH HOH . G 3 HOH A 123 2123 2123 HOH HOH . G 3 HOH A 124 2124 2124 HOH HOH . H 3 HOH B 1 2001 2001 HOH HOH . H 3 HOH B 2 2002 2002 HOH HOH . H 3 HOH B 3 2003 2003 HOH HOH . H 3 HOH B 4 2004 2004 HOH HOH . H 3 HOH B 5 2005 2005 HOH HOH . H 3 HOH B 6 2006 2006 HOH HOH . H 3 HOH B 7 2007 2007 HOH HOH . H 3 HOH B 8 2008 2008 HOH HOH . H 3 HOH B 9 2009 2009 HOH HOH . H 3 HOH B 10 2010 2010 HOH HOH . H 3 HOH B 11 2011 2011 HOH HOH . H 3 HOH B 12 2012 2012 HOH HOH . H 3 HOH B 13 2013 2013 HOH HOH . H 3 HOH B 14 2014 2014 HOH HOH . H 3 HOH B 15 2015 2015 HOH HOH . H 3 HOH B 16 2016 2016 HOH HOH . H 3 HOH B 17 2017 2017 HOH HOH . H 3 HOH B 18 2018 2018 HOH HOH . H 3 HOH B 19 2019 2019 HOH HOH . H 3 HOH B 20 2020 2020 HOH HOH . H 3 HOH B 21 2021 2021 HOH HOH . H 3 HOH B 22 2022 2022 HOH HOH . H 3 HOH B 23 2023 2023 HOH HOH . H 3 HOH B 24 2024 2024 HOH HOH . H 3 HOH B 25 2025 2025 HOH HOH . H 3 HOH B 26 2026 2026 HOH HOH . H 3 HOH B 27 2027 2027 HOH HOH . H 3 HOH B 28 2028 2028 HOH HOH . H 3 HOH B 29 2029 2029 HOH HOH . H 3 HOH B 30 2030 2030 HOH HOH . H 3 HOH B 31 2031 2031 HOH HOH . H 3 HOH B 32 2032 2032 HOH HOH . H 3 HOH B 33 2033 2033 HOH HOH . H 3 HOH B 34 2034 2034 HOH HOH . H 3 HOH B 35 2035 2035 HOH HOH . H 3 HOH B 36 2036 2036 HOH HOH . H 3 HOH B 37 2037 2037 HOH HOH . H 3 HOH B 38 2038 2038 HOH HOH . H 3 HOH B 39 2039 2039 HOH HOH . H 3 HOH B 40 2040 2040 HOH HOH . H 3 HOH B 41 2041 2041 HOH HOH . H 3 HOH B 42 2042 2042 HOH HOH . H 3 HOH B 43 2043 2043 HOH HOH . H 3 HOH B 44 2044 2044 HOH HOH . H 3 HOH B 45 2045 2045 HOH HOH . H 3 HOH B 46 2046 2046 HOH HOH . H 3 HOH B 47 2047 2047 HOH HOH . H 3 HOH B 48 2048 2048 HOH HOH . H 3 HOH B 49 2049 2049 HOH HOH . H 3 HOH B 50 2050 2050 HOH HOH . H 3 HOH B 51 2051 2051 HOH HOH . H 3 HOH B 52 2052 2052 HOH HOH . H 3 HOH B 53 2053 2053 HOH HOH . H 3 HOH B 54 2054 2054 HOH HOH . H 3 HOH B 55 2055 2055 HOH HOH . H 3 HOH B 56 2056 2056 HOH HOH . H 3 HOH B 57 2057 2057 HOH HOH . H 3 HOH B 58 2058 2058 HOH HOH . H 3 HOH B 59 2059 2059 HOH HOH . H 3 HOH B 60 2060 2060 HOH HOH . H 3 HOH B 61 2061 2061 HOH HOH . H 3 HOH B 62 2062 2062 HOH HOH . H 3 HOH B 63 2063 2063 HOH HOH . H 3 HOH B 64 2064 2064 HOH HOH . H 3 HOH B 65 2065 2065 HOH HOH . H 3 HOH B 66 2066 2066 HOH HOH . H 3 HOH B 67 2067 2067 HOH HOH . H 3 HOH B 68 2068 2068 HOH HOH . H 3 HOH B 69 2069 2069 HOH HOH . H 3 HOH B 70 2070 2070 HOH HOH . H 3 HOH B 71 2071 2071 HOH HOH . H 3 HOH B 72 2072 2072 HOH HOH . H 3 HOH B 73 2073 2073 HOH HOH . H 3 HOH B 74 2074 2074 HOH HOH . H 3 HOH B 75 2075 2075 HOH HOH . H 3 HOH B 76 2076 2076 HOH HOH . H 3 HOH B 77 2077 2077 HOH HOH . H 3 HOH B 78 2078 2078 HOH HOH . H 3 HOH B 79 2079 2079 HOH HOH . H 3 HOH B 80 2080 2080 HOH HOH . H 3 HOH B 81 2081 2081 HOH HOH . H 3 HOH B 82 2082 2082 HOH HOH . H 3 HOH B 83 2083 2083 HOH HOH . H 3 HOH B 84 2084 2084 HOH HOH . H 3 HOH B 85 2085 2085 HOH HOH . H 3 HOH B 86 2086 2086 HOH HOH . H 3 HOH B 87 2087 2087 HOH HOH . H 3 HOH B 88 2088 2088 HOH HOH . H 3 HOH B 89 2089 2089 HOH HOH . H 3 HOH B 90 2090 2090 HOH HOH . H 3 HOH B 91 2091 2091 HOH HOH . H 3 HOH B 92 2092 2092 HOH HOH . H 3 HOH B 93 2093 2093 HOH HOH . H 3 HOH B 94 2094 2094 HOH HOH . H 3 HOH B 95 2095 2095 HOH HOH . H 3 HOH B 96 2096 2096 HOH HOH . H 3 HOH B 97 2097 2097 HOH HOH . H 3 HOH B 98 2098 2098 HOH HOH . H 3 HOH B 99 2099 2099 HOH HOH . H 3 HOH B 100 2100 2100 HOH HOH . H 3 HOH B 101 2101 2101 HOH HOH . H 3 HOH B 102 2102 2102 HOH HOH . H 3 HOH B 103 2103 2103 HOH HOH . H 3 HOH B 104 2104 2104 HOH HOH . H 3 HOH B 105 2105 2105 HOH HOH . H 3 HOH B 106 2106 2106 HOH HOH . H 3 HOH B 107 2107 2107 HOH HOH . H 3 HOH B 108 2108 2108 HOH HOH . H 3 HOH B 109 2109 2109 HOH HOH . H 3 HOH B 110 2110 2110 HOH HOH . H 3 HOH B 111 2111 2111 HOH HOH . H 3 HOH B 112 2112 2112 HOH HOH . H 3 HOH B 113 2113 2113 HOH HOH . H 3 HOH B 114 2114 2114 HOH HOH . H 3 HOH B 115 2115 2115 HOH HOH . H 3 HOH B 116 2116 2116 HOH HOH . H 3 HOH B 117 2117 2117 HOH HOH . H 3 HOH B 118 2118 2118 HOH HOH . H 3 HOH B 119 2119 2119 HOH HOH . H 3 HOH B 120 2120 2120 HOH HOH . H 3 HOH B 121 2121 2121 HOH HOH . H 3 HOH B 122 2122 2122 HOH HOH . H 3 HOH B 123 2123 2123 HOH HOH . H 3 HOH B 124 2124 2124 HOH HOH . H 3 HOH B 125 2125 2125 HOH HOH . H 3 HOH B 126 2126 2126 HOH HOH . H 3 HOH B 127 2127 2127 HOH HOH . H 3 HOH B 128 2128 2128 HOH HOH . H 3 HOH B 129 2129 2129 HOH HOH . H 3 HOH B 130 2130 2130 HOH HOH . H 3 HOH B 131 2131 2131 HOH HOH . H 3 HOH B 132 2132 2132 HOH HOH . H 3 HOH B 133 2133 2133 HOH HOH . H 3 HOH B 134 2134 2134 HOH HOH . H 3 HOH B 135 2135 2135 HOH HOH . H 3 HOH B 136 2136 2136 HOH HOH . H 3 HOH B 137 2137 2137 HOH HOH . H 3 HOH B 138 2138 2138 HOH HOH . H 3 HOH B 139 2139 2139 HOH HOH . H 3 HOH B 140 2140 2140 HOH HOH . H 3 HOH B 141 2141 2141 HOH HOH . H 3 HOH B 142 2142 2142 HOH HOH . H 3 HOH B 143 2143 2143 HOH HOH . H 3 HOH B 144 2144 2144 HOH HOH . H 3 HOH B 145 2145 2145 HOH HOH . H 3 HOH B 146 2146 2146 HOH HOH . H 3 HOH B 147 2147 2147 HOH HOH . H 3 HOH B 148 2148 2148 HOH HOH . H 3 HOH B 149 2149 2149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CNH . . . C 2 51.788 45.235 120.665 1 44.06 ? C1 CNH 1259 A 1 HETATM 2 C C2 CNH . . . C 2 51.803 45.381 119.117 1 39.21 ? C2 CNH 1259 A 1 HETATM 3 C C3 CNH . . . C 2 52.711 46.286 121.337 1 30.88 ? C3 CNH 1259 A 1 HETATM 4 C C4 CNH . . . C 2 52.244 43.98 121.084 1 44.75 ? C4 CNH 1259 A 1 HETATM 5 O O6 CNH . . . C 2 50.416 45.342 121.078 1 32.89 ? O6 CNH 1259 A 1 HETATM 6 N N5 CNH . . . C 2 52.616 42.942 121.445 1 54.63 ? N5 CNH 1259 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #