data_1E8E # _model_server_result.job_id m_UQjy0XSQdhS4NXUgIH7g _model_server_result.datetime_utc '2025-01-26 12:23:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1e8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":125}' # _entry.id 1E8E # _exptl.entry_id 1E8E _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1E8E _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 96 1_555 A SG CYS 104 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? covale ? covale1 A SG CYS 49 A CYS 49 1_555 B CAB HEC . A HEC 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? covale ? covale2 A SG CYS 52 A CYS 52 1_555 B CAC HEC . A HEC 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? metalc ? metalc1 A NE2 HIS 53 A HIS 53 1_555 B FE HEC . A HEC 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? metalc ? metalc2 A NE2 HIS 95 A HIS 95 1_555 B FE HEC . A HEC 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 110 n n FE NB HEC sing 111 n n FE NC HEC sing 112 n n FE ND HEC sing 113 n n CHA C1A HEC doub 114 n n CHA C4D HEC sing 115 n n CHA HHA HEC sing 116 n n CHB C4A HEC doub 117 n n CHB C1B HEC sing 118 n n CHB HHB HEC sing 119 n n CHC C4B HEC doub 120 n n CHC C1C HEC sing 121 n n CHC HHC HEC sing 122 n n CHD C4C HEC doub 123 n n CHD C1D HEC sing 124 n n CHD HHD HEC sing 125 n n NA C1A HEC sing 126 n y NA C4A HEC sing 127 n y C1A C2A HEC sing 128 n y C2A C3A HEC doub 129 n y C2A CAA HEC sing 130 n n C3A C4A HEC sing 131 n y C3A CMA HEC sing 132 n n CMA HMA1 HEC sing 133 n n CMA HMA2 HEC sing 134 n n CMA HMA3 HEC sing 135 n n CAA CBA HEC sing 136 n n CAA HAA1 HEC sing 137 n n CAA HAA2 HEC sing 138 n n CBA CGA HEC sing 139 n n CBA HBA1 HEC sing 140 n n CBA HBA2 HEC sing 141 n n CGA O1A HEC doub 142 n n CGA O2A HEC sing 143 n n O2A H2A HEC sing 144 n n NB C1B HEC sing 145 n y NB C4B HEC sing 146 n y C1B C2B HEC doub 147 n y C2B C3B HEC sing 148 n y C2B CMB HEC sing 149 n n C3B C4B HEC sing 150 n y C3B CAB HEC doub 151 e n CMB HMB1 HEC sing 152 n n CMB HMB2 HEC sing 153 n n CMB HMB3 HEC sing 154 n n CAB CBB HEC sing 155 n n CAB HAB HEC sing 156 n n CBB HBB1 HEC sing 157 n n CBB HBB2 HEC sing 158 n n CBB HBB3 HEC sing 159 n n NC C1C HEC sing 160 n y NC C4C HEC sing 161 n y C1C C2C HEC doub 162 n y C2C C3C HEC sing 163 n y C2C CMC HEC sing 164 n n C3C C4C HEC sing 165 n y C3C CAC HEC doub 166 e n CMC HMC1 HEC sing 167 n n CMC HMC2 HEC sing 168 n n CMC HMC3 HEC sing 169 n n CAC CBC HEC sing 170 n n CAC HAC HEC sing 171 n n CBC HBC1 HEC sing 172 n n CBC HBC2 HEC sing 173 n n CBC HBC3 HEC sing 174 n n ND C1D HEC sing 175 n y ND C4D HEC sing 176 n y C1D C2D HEC doub 177 n y C2D C3D HEC sing 178 n y C2D CMD HEC sing 179 n n C3D C4D HEC doub 180 n y C3D CAD HEC sing 181 n n CMD HMD1 HEC sing 182 n n CMD HMD2 HEC sing 183 n n CMD HMD3 HEC sing 184 n n CAD CBD HEC sing 185 n n CAD HAD1 HEC sing 186 n n CAD HAD2 HEC sing 187 n n CBD CGD HEC sing 188 n n CBD HBD1 HEC sing 189 n n CBD HBD2 HEC sing 190 n n CGD O1D HEC doub 191 n n CGD O2D HEC sing 192 n n O2D H2D HEC sing 193 n n # _atom_sites.entry_id 1E8E _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HEC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 125 _pdbx_nonpoly_scheme.auth_seq_num 125 _pdbx_nonpoly_scheme.pdb_mon_id HEC _pdbx_nonpoly_scheme.auth_mon_id HEC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 -3.369 2.742 -5.32 1 0 ? FE HEC 125 A 1 HETATM 2 C CHA HEC . . . B 2 -6.198 2.715 -3.339 1 0 ? CHA HEC 125 A 1 HETATM 3 C CHB HEC . . . B 2 -1.681 0.944 -2.914 1 0 ? CHB HEC 125 A 1 HETATM 4 C CHC HEC . . . B 2 -0.565 2.599 -7.357 1 0 ? CHC HEC 125 A 1 HETATM 5 C CHD HEC . . . B 2 -5.03 4.665 -7.646 1 0 ? CHD HEC 125 A 1 HETATM 6 N NA HEC . . . B 2 -3.844 1.997 -3.505 1 0 ? NA HEC 125 A 1 HETATM 7 C C1A HEC . . . B 2 -5.064 2.07 -2.856 1 0 ? C1A HEC 125 A 1 HETATM 8 C C2A HEC . . . B 2 -5.001 1.377 -1.591 1 0 ? C2A HEC 125 A 1 HETATM 9 C C3A HEC . . . B 2 -3.75 0.885 -1.47 1 0 ? C3A HEC 125 A 1 HETATM 10 C C4A HEC . . . B 2 -3.026 1.268 -2.659 1 0 ? C4A HEC 125 A 1 HETATM 11 C CMA HEC . . . B 2 -3.177 0.086 -0.336 1 0 ? CMA HEC 125 A 1 HETATM 12 C CAA HEC . . . B 2 -6.14 1.253 -0.622 1 0 ? CAA HEC 125 A 1 HETATM 13 C CBA HEC . . . B 2 -7.06 0.066 -0.895 1 0 ? CBA HEC 125 A 1 HETATM 14 C CGA HEC . . . B 2 -8.152 -0.035 0.161 1 0 ? CGA HEC 125 A 1 HETATM 15 O O1A HEC . . . B 2 -9.304 -0.308 -0.239 1 0 ? O1A HEC 125 A 1 HETATM 16 O O2A HEC . . . B 2 -7.814 0.163 1.348 1 0 ? O2A HEC 125 A 1 HETATM 17 N NB HEC . . . B 2 -1.482 1.999 -5.135 1 0 ? NB HEC 125 A 1 HETATM 18 C C1B HEC . . . B 2 -1.03 1.173 -4.121 1 0 ? C1B HEC 125 A 1 HETATM 19 C C2B HEC . . . B 2 0.23 0.57 -4.491 1 0 ? C2B HEC 125 A 1 HETATM 20 C C3B HEC . . . B 2 0.542 1.027 -5.722 1 0 ? C3B HEC 125 A 1 HETATM 21 C C4B HEC . . . B 2 -0.521 1.917 -6.127 1 0 ? C4B HEC 125 A 1 HETATM 22 C CMB HEC . . . B 2 1.011 -0.382 -3.633 1 0 ? CMB HEC 125 A 1 HETATM 23 C CAB HEC . . . B 2 1.751 0.701 -6.55 1 0 ? CAB HEC 125 A 1 HETATM 24 C CBB HEC . . . B 2 2.003 -0.795 -6.717 1 0 ? CBB HEC 125 A 1 HETATM 25 N NC HEC . . . B 2 -2.937 3.421 -7.188 1 0 ? NC HEC 125 A 1 HETATM 26 C C1C HEC . . . B 2 -1.686 3.434 -7.78 1 0 ? C1C HEC 125 A 1 HETATM 27 C C2C HEC . . . B 2 -1.658 4.377 -8.873 1 0 ? C2C HEC 125 A 1 HETATM 28 C C3C HEC . . . B 2 -2.885 4.936 -8.946 1 0 ? C3C HEC 125 A 1 HETATM 29 C C4C HEC . . . B 2 -3.684 4.344 -7.9 1 0 ? C4C HEC 125 A 1 HETATM 30 C CMC HEC . . . B 2 -0.464 4.652 -9.739 1 0 ? CMC HEC 125 A 1 HETATM 31 C CAC HEC . . . B 2 -3.37 5.976 -9.913 1 0 ? CAC HEC 125 A 1 HETATM 32 C CBC HEC . . . B 2 -3.379 5.515 -11.368 1 0 ? CBC HEC 125 A 1 HETATM 33 N ND HEC . . . B 2 -5.214 3.552 -5.452 1 0 ? ND HEC 125 A 1 HETATM 34 C C1D HEC . . . B 2 -5.736 4.268 -6.515 1 0 ? C1D HEC 125 A 1 HETATM 35 C C2D HEC . . . B 2 -7.134 4.553 -6.289 1 0 ? C2D HEC 125 A 1 HETATM 36 C C3D HEC . . . B 2 -7.46 4.014 -5.095 1 0 ? C3D HEC 125 A 1 HETATM 37 C C4D HEC . . . B 2 -6.269 3.39 -4.571 1 0 ? C4D HEC 125 A 1 HETATM 38 C CMD HEC . . . B 2 -8.019 5.312 -7.234 1 0 ? CMD HEC 125 A 1 HETATM 39 C CAD HEC . . . B 2 -8.794 4.034 -4.406 1 0 ? CAD HEC 125 A 1 HETATM 40 C CBD HEC . . . B 2 -8.903 5.075 -3.295 1 0 ? CBD HEC 125 A 1 HETATM 41 C CGD HEC . . . B 2 -8.603 6.471 -3.821 1 0 ? CGD HEC 125 A 1 HETATM 42 O O1D HEC . . . B 2 -7.796 6.558 -4.772 1 0 ? O1D HEC 125 A 1 HETATM 43 O O2D HEC . . . B 2 -9.185 7.425 -3.262 1 0 ? O2D HEC 125 A 1 HETATM 44 H HHA HEC . . . B 2 -7.097 2.698 -2.723 1 0 ? HHA HEC 125 A 1 HETATM 45 H HHB HEC . . . B 2 -1.114 0.48 -2.106 1 0 ? HHB HEC 125 A 1 HETATM 46 H HHC HEC . . . B 2 0.301 2.511 -8.012 1 0 ? HHC HEC 125 A 1 HETATM 47 H HHD HEC . . . B 2 -5.552 5.266 -8.391 1 0 ? HHD HEC 125 A 1 HETATM 48 H HMA1 HEC . . . B 2 -3.068 0.726 0.54 1 0 ? HMA1 HEC 125 A 1 HETATM 49 H HMA2 HEC . . . B 2 -3.844 -0.742 -0.101 1 0 ? HMA2 HEC 125 A 1 HETATM 50 H HMA3 HEC . . . B 2 -2.2 -0.304 -0.623 1 0 ? HMA3 HEC 125 A 1 HETATM 51 H HAA1 HEC . . . B 2 -5.747 1.13 0.387 1 0 ? HAA1 HEC 125 A 1 HETATM 52 H HAA2 HEC . . . B 2 -6.755 2.152 -0.666 1 0 ? HAA2 HEC 125 A 1 HETATM 53 H HBA1 HEC . . . B 2 -7.529 0.186 -1.871 1 0 ? HBA1 HEC 125 A 1 HETATM 54 H HBA2 HEC . . . B 2 -6.477 -0.856 -0.882 1 0 ? HBA2 HEC 125 A 1 HETATM 55 H HMB1 HEC . . . B 2 1.534 -1.097 -4.268 1 0 ? HMB1 HEC 125 A 1 HETATM 56 H HMB2 HEC . . . B 2 1.736 0.175 -3.04 1 0 ? HMB2 HEC 125 A 1 HETATM 57 H HMB3 HEC . . . B 2 0.33 -0.915 -2.969 1 0 ? HMB3 HEC 125 A 1 HETATM 58 H HAB HEC . . . B 2 1.631 1.12 -7.549 1 0 ? HAB HEC 125 A 1 HETATM 59 H HBB1 HEC . . . B 2 2.691 -1.136 -5.944 1 0 ? HBB1 HEC 125 A 1 HETATM 60 H HBB2 HEC . . . B 2 1.06 -1.334 -6.628 1 0 ? HBB2 HEC 125 A 1 HETATM 61 H HBB3 HEC . . . B 2 2.438 -0.982 -7.699 1 0 ? HBB3 HEC 125 A 1 HETATM 62 H HMC1 HEC . . . B 2 -0.097 3.717 -10.16 1 0 ? HMC1 HEC 125 A 1 HETATM 63 H HMC2 HEC . . . B 2 -0.748 5.327 -10.546 1 0 ? HMC2 HEC 125 A 1 HETATM 64 H HMC3 HEC . . . B 2 0.321 5.114 -9.14 1 0 ? HMC3 HEC 125 A 1 HETATM 65 H HAC HEC . . . B 2 -4.391 6.26 -9.659 1 0 ? HAC HEC 125 A 1 HETATM 66 H HBC1 HEC . . . B 2 -2.354 5.424 -11.727 1 0 ? HBC1 HEC 125 A 1 HETATM 67 H HBC2 HEC . . . B 2 -3.877 4.548 -11.439 1 0 ? HBC2 HEC 125 A 1 HETATM 68 H HBC3 HEC . . . B 2 -3.913 6.245 -11.977 1 0 ? HBC3 HEC 125 A 1 HETATM 69 H HMD1 HEC . . . B 2 -8.76 5.873 -6.665 1 0 ? HMD1 HEC 125 A 1 HETATM 70 H HMD2 HEC . . . B 2 -7.415 6.001 -7.824 1 0 ? HMD2 HEC 125 A 1 HETATM 71 H HMD3 HEC . . . B 2 -8.525 4.612 -7.899 1 0 ? HMD3 HEC 125 A 1 HETATM 72 H HAD1 HEC . . . B 2 -9.575 4.257 -5.133 1 0 ? HAD1 HEC 125 A 1 HETATM 73 H HAD2 HEC . . . B 2 -8.984 3.06 -3.955 1 0 ? HAD2 HEC 125 A 1 HETATM 74 H HBD1 HEC . . . B 2 -9.913 5.065 -2.887 1 0 ? HBD1 HEC 125 A 1 HETATM 75 H HBD2 HEC . . . B 2 -8.189 4.839 -2.506 1 0 ? HBD2 HEC 125 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 6521 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 75 #