data_1E90
#
_model_server_result.job_id            h6ZHtSTm2hELLKsLLk622A 
_model_server_result.datetime_utc      '2024-10-24 04:32:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1e90 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2095}' 
#
_entry.id    1E90 
#
_exptl.entry_id    1E90 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              318.235 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.94 
_cell.angle_gamma         90 
_cell.entry_id            1E90 
_cell.length_a            143.679 
_cell.length_b            67.735 
_cell.length_c            106.988 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1E90 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H10 O8' 
_chem_comp.formula_weight    318.235 
_chem_comp.id                MYC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2-(3,4,5-TRIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-4H-1-BENZOPYRAN-4-ONE;3,3',4',5,5',7-HEXAHYDROXYFLAVONE;MYRICETIN;CANNABISCETIN" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MYC doub 235 n y 
C1 C6 MYC sing 236 n y 
C1 H1 MYC sing 237 n n 
C2 C3 MYC sing 238 n y 
C2 O30 MYC sing 239 n n 
C3 C4 MYC doub 240 n y 
C3 C9 MYC sing 241 n y 
C4 C5 MYC sing 242 n y 
C4 O12 MYC sing 243 n y 
C5 C6 MYC doub 244 n y 
C5 H5 MYC sing 245 n n 
C6 O29 MYC sing 246 n n 
C9 C10 MYC sing 247 n y 
C9 O13 MYC doub 248 n n 
C10 C11 MYC doub 249 n y 
C10 O27 MYC sing 250 n n 
C11 C14 MYC sing 251 n y 
C11 O12 MYC sing 252 n y 
C14 C15 MYC doub 253 n y 
C14 C19 MYC sing 254 n y 
C15 C16 MYC sing 255 n y 
C15 H15 MYC sing 256 n n 
C16 C17 MYC doub 257 n y 
C16 O25 MYC sing 258 n n 
C17 C18 MYC sing 259 n y 
C17 O24 MYC sing 260 n n 
C18 C19 MYC doub 261 n y 
C18 O23 MYC sing 262 n n 
C19 H19 MYC sing 263 n n 
O23 HO3 MYC sing 264 n n 
O24 HO4 MYC sing 265 n n 
O25 HO5 MYC sing 266 n n 
O27 HO7 MYC sing 267 n n 
O29 HO9 MYC sing 268 n n 
O30 HO0 MYC sing 269 n n 
#
_atom_sites.entry_id                     1E90 
_atom_sites.fract_transf_matrix[1][1]    0.00696 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000724 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014763 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           MYC 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      2095 
_pdbx_nonpoly_scheme.auth_seq_num     2095 
_pdbx_nonpoly_scheme.pdb_mon_id       MYC 
_pdbx_nonpoly_scheme.auth_mon_id      MYC 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MYC . . . B 2 26.588 60.184 21.218 1 93.07 ? C1 MYC 2095 A 1 
HETATM 2 C C2 MYC . . . B 2 25.877 61.109 20.465 1 93.07 ? C2 MYC 2095 A 1 
HETATM 3 C C3 MYC . . . B 2 24.498 61.446 20.768 1 93.07 ? C3 MYC 2095 A 1 
HETATM 4 C C4 MYC . . . B 2 23.88 60.717 21.832 1 93.07 ? C4 MYC 2095 A 1 
HETATM 5 C C5 MYC . . . B 2 24.587 59.783 22.598 1 93.07 ? C5 MYC 2095 A 1 
HETATM 6 C C6 MYC . . . B 2 25.911 59.495 22.294 1 93.07 ? C6 MYC 2095 A 1 
HETATM 7 C C9 MYC . . . B 2 23.688 62.409 20.01 1 93.07 ? C9 MYC 2095 A 1 
HETATM 8 C C10 MYC . . . B 2 22.29 62.585 20.438 1 93.07 ? C10 MYC 2095 A 1 
HETATM 9 C C11 MYC . . . B 2 21.782 61.859 21.525 1 93.07 ? C11 MYC 2095 A 1 
HETATM 10 C C14 MYC . . . B 2 20.386 61.891 22.104 1 93.07 ? C14 MYC 2095 A 1 
HETATM 11 C C15 MYC . . . B 2 20.021 60.917 23.071 1 93.07 ? C15 MYC 2095 A 1 
HETATM 12 C C16 MYC . . . B 2 18.718 60.926 23.652 1 93.07 ? C16 MYC 2095 A 1 
HETATM 13 C C17 MYC . . . B 2 17.762 61.891 23.258 1 93.07 ? C17 MYC 2095 A 1 
HETATM 14 C C18 MYC . . . B 2 18.144 62.857 22.305 1 93.07 ? C18 MYC 2095 A 1 
HETATM 15 C C19 MYC . . . B 2 19.424 62.866 21.72 1 93.07 ? C19 MYC 2095 A 1 
HETATM 16 O O12 MYC . . . B 2 22.574 60.949 22.183 1 93.07 ? O12 MYC 2095 A 1 
HETATM 17 O O13 MYC . . . B 2 24.141 63.075 19.051 1 93.07 ? O13 MYC 2095 A 1 
HETATM 18 O O23 MYC . . . B 2 17.285 63.812 21.885 1 93.07 ? O23 MYC 2095 A 1 
HETATM 19 O O24 MYC . . . B 2 16.54 61.846 23.848 1 93.07 ? O24 MYC 2095 A 1 
HETATM 20 O O25 MYC . . . B 2 18.328 60.006 24.58 1 93.07 ? O25 MYC 2095 A 1 
HETATM 21 O O27 MYC . . . B 2 21.562 63.499 19.747 1 93.07 ? O27 MYC 2095 A 1 
HETATM 22 O O29 MYC . . . B 2 26.662 58.61 22.959 1 93.07 ? O29 MYC 2095 A 1 
HETATM 23 O O30 MYC . . . B 2 26.519 61.774 19.438 1 93.07 ? O30 MYC 2095 A 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#