data_1EA0
#
_model_server_result.job_id            jtZAjw_ZcJDlJYE_liC9sQ 
_model_server_result.datetime_utc      '2024-11-26 21:25:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ea0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2474}' 
#
_entry.id    1EA0 
#
_exptl.entry_id    1EA0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1EA0 
_cell.length_a            233.612 
_cell.length_b            233.612 
_cell.length_c            305.089 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1EA0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F 1 1 
B,G,H,I,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 1102 A CYS 1102 1_555 F FE1 F3S . A F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc2 A SG CYS 1108 A CYS 1108 1_555 F FE4 F3S . A F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? 
metalc ? metalc3 A SG CYS 1113 A CYS 1113 1_555 F FE3 F3S . A F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? 
metalc ? metalc4 B SG CYS 1102 B CYS 1102 1_555 J FE1 F3S . B F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc5 B SG CYS 1108 B CYS 1108 1_555 J FE4 F3S . B F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? 
metalc ? metalc6 B SG CYS 1113 B CYS 1113 1_555 J FE3 F3S . B F3S 2476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 107 n n 
N1 C10 FMN doub 108 n n 
C2 O2 FMN doub 109 n n 
C2 N3 FMN sing 110 n n 
N3 C4 FMN sing 111 n n 
N3 HN3 FMN sing 112 n n 
C4 O4 FMN doub 113 n n 
C4 C4A FMN sing 114 n n 
C4A N5 FMN doub 115 n n 
C4A C10 FMN sing 116 n n 
N5 C5A FMN sing 117 n n 
C5A C6 FMN doub 118 n y 
C5A C9A FMN sing 119 n y 
C6 C7 FMN sing 120 n y 
C6 H6 FMN sing 121 n n 
C7 C7M FMN sing 122 n n 
C7 C8 FMN doub 123 n y 
C7M HM71 FMN sing 124 n n 
C7M HM72 FMN sing 125 n n 
C7M HM73 FMN sing 126 n n 
C8 C8M FMN sing 127 n n 
C8 C9 FMN sing 128 n y 
C8M HM81 FMN sing 129 n n 
C8M HM82 FMN sing 130 n n 
C8M HM83 FMN sing 131 n n 
C9 C9A FMN doub 132 n y 
C9 H9 FMN sing 133 n n 
C9A N10 FMN sing 134 n n 
N10 C10 FMN sing 135 n n 
N10 C1' FMN sing 136 n n 
C1' C2' FMN sing 137 n n 
C1' "H1'1" FMN sing 138 n n 
C1' "H1'2" FMN sing 139 n n 
C2' O2' FMN sing 140 n n 
C2' C3' FMN sing 141 n n 
C2' H2' FMN sing 142 n n 
O2' HO2' FMN sing 143 n n 
C3' O3' FMN sing 144 n n 
C3' C4' FMN sing 145 n n 
C3' H3' FMN sing 146 n n 
O3' HO3' FMN sing 147 n n 
C4' O4' FMN sing 148 n n 
C4' C5' FMN sing 149 n n 
C4' H4' FMN sing 150 n n 
O4' HO4' FMN sing 151 n n 
C5' O5' FMN sing 152 n n 
C5' "H5'1" FMN sing 153 n n 
C5' "H5'2" FMN sing 154 n n 
O5' P FMN sing 155 n n 
P O1P FMN doub 156 n n 
P O2P FMN sing 157 n n 
P O3P FMN sing 158 n n 
O2P HOP2 FMN sing 159 n n 
O3P HOP3 FMN sing 160 n n 
#
_atom_sites.entry_id                     1EA0 
_atom_sites.fract_transf_matrix[1][1]    0.004281 
_atom_sites.fract_transf_matrix[1][2]    0.002471 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004943 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003278 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OMT A 1 2473 2473 OMT OMT . 
D 3 FMN A 1 2474 2474 FMN FMN . 
E 4 AKG A 1 2475 2475 AKG AKG . 
F 5 F3S A 1 2476 2476 F3S F3S . 
G 2 OMT B 1 2473 2473 OMT OMT . 
H 3 FMN B 1 2474 2474 FMN FMN . 
I 4 AKG B 1 2475 2475 AKG AKG . 
J 5 F3S B 1 2476 2476 F3S F3S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . H 3 113.661 110.092 118.069 1 42.84 ? N1 FMN 2474 B 1 
HETATM 2 C C2 FMN . . . H 3 113.336 109.414 119.246 1 49.89 ? C2 FMN 2474 B 1 
HETATM 3 O O2 FMN . . . H 3 112.244 109.475 119.782 1 58.63 ? O2 FMN 2474 B 1 
HETATM 4 N N3 FMN . . . H 3 114.194 108.596 119.937 1 49.07 ? N3 FMN 2474 B 1 
HETATM 5 C C4 FMN . . . H 3 115.447 108.401 119.434 1 56.79 ? C4 FMN 2474 B 1 
HETATM 6 O O4 FMN . . . H 3 116.226 107.661 120.044 1 55.23 ? O4 FMN 2474 B 1 
HETATM 7 C C4A FMN . . . H 3 115.802 109.062 118.258 1 55.36 ? C4A FMN 2474 B 1 
HETATM 8 N N5 FMN . . . H 3 117.048 108.813 117.787 1 61.92 ? N5 FMN 2474 B 1 
HETATM 9 C C5A FMN . . . H 3 117.524 109.462 116.682 1 59.7 ? C5A FMN 2474 B 1 
HETATM 10 C C6 FMN . . . H 3 118.836 109.265 116.246 1 59.56 ? C6 FMN 2474 B 1 
HETATM 11 C C7 FMN . . . H 3 119.333 109.936 115.146 1 57.05 ? C7 FMN 2474 B 1 
HETATM 12 C C7M FMN . . . H 3 120.683 109.678 114.579 1 63.75 ? C7M FMN 2474 B 1 
HETATM 13 C C8 FMN . . . H 3 118.533 110.798 114.46 1 59.89 ? C8 FMN 2474 B 1 
HETATM 14 C C8M FMN . . . H 3 119.167 111.373 113.241 1 57.01 ? C8M FMN 2474 B 1 
HETATM 15 C C9 FMN . . . H 3 117.205 110.97 114.865 1 62.74 ? C9 FMN 2474 B 1 
HETATM 16 C C9A FMN . . . H 3 116.709 110.326 116.004 1 56.47 ? C9A FMN 2474 B 1 
HETATM 17 N N10 FMN . . . H 3 115.454 110.555 116.459 1 48.99 ? N10 FMN 2474 B 1 
HETATM 18 C C10 FMN . . . H 3 114.956 109.925 117.581 1 50.78 ? C10 FMN 2474 B 1 
HETATM 19 C C1' FMN . . . H 3 114.725 111.556 115.627 1 56.05 ? C1' FMN 2474 B 1 
HETATM 20 C C2' FMN . . . H 3 114.839 112.914 116.285 1 55.98 ? C2' FMN 2474 B 1 
HETATM 21 O O2' FMN . . . H 3 114.649 112.604 117.629 1 61.03 ? O2' FMN 2474 B 1 
HETATM 22 C C3' FMN . . . H 3 113.834 113.939 115.728 1 59.34 ? C3' FMN 2474 B 1 
HETATM 23 O O3' FMN . . . H 3 112.503 113.431 115.667 1 60.96 ? O3' FMN 2474 B 1 
HETATM 24 C C4' FMN . . . H 3 114.349 114.014 114.308 1 48.82 ? C4' FMN 2474 B 1 
HETATM 25 O O4' FMN . . . H 3 115.461 113.225 114.582 1 52.19 ? O4' FMN 2474 B 1 
HETATM 26 C C5' FMN . . . H 3 114.86 115.321 113.721 1 43.03 ? C5' FMN 2474 B 1 
HETATM 27 O O5' FMN . . . H 3 115.329 115.063 112.401 1 36.89 ? O5' FMN 2474 B 1 
HETATM 28 P P FMN . . . H 3 115.713 116.372 111.578 1 52.32 ? P FMN 2474 B 1 
HETATM 29 O O1P FMN . . . H 3 115.638 116.034 110.092 1 57.8 ? O1P FMN 2474 B 1 
HETATM 30 O O2P FMN . . . H 3 114.851 117.539 111.847 1 44.63 ? O2P FMN 2474 B 1 
HETATM 31 O O3P FMN . . . H 3 117.006 117.079 112.057 1 61.5 ? O3P FMN 2474 B 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#