data_1EAD # _model_server_result.job_id U5zQjddrhuPUB_AVscBRDg _model_server_result.datetime_utc '2024-10-12 01:23:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ead # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":638}' # _entry.id 1EAD # _exptl.entry_id 1EAD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 783.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXIDIZED COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EAD _cell.length_a 225.54 _cell.length_b 225.54 _cell.length_c 225.54 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EAD _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O17 P3 S' _chem_comp.formula_weight 783.534 _chem_comp.id CAO _chem_comp.mon_nstd_flag . _chem_comp.name 'OXIDIZED COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A CAO sing 70 n y N1A C6A CAO doub 71 n y C2A N3A CAO doub 72 n y C2A H2A CAO sing 73 n n N3A C4A CAO sing 74 n y C4A C5A CAO doub 75 n y C4A N9A CAO sing 76 n y C5A C6A CAO sing 77 n y C5A N7A CAO sing 78 n y C6A N6A CAO sing 79 n n N6A H61A CAO sing 80 n n N6A H62A CAO sing 81 n n N7A C8A CAO doub 82 n y C8A N9A CAO sing 83 n y C8A H8A CAO sing 84 n n N9A C1B CAO sing 85 n n C1B C2B CAO sing 86 n n C1B O4B CAO sing 87 n n C1B H1B CAO sing 88 n n C2B O2B CAO sing 89 n n C2B C3B CAO sing 90 n n C2B H2B CAO sing 91 n n O2B HO2A CAO sing 92 n n C3B O3B CAO sing 93 n n C3B C4B CAO sing 94 n n C3B H3B CAO sing 95 n n O3B P3B CAO sing 96 n n P3B O7A CAO doub 97 n n P3B O8A CAO sing 98 n n P3B O9A CAO sing 99 n n O8A HOA8 CAO sing 100 n n O9A HOA9 CAO sing 101 n n C4B O4B CAO sing 102 n n C4B C5B CAO sing 103 n n C4B H4B CAO sing 104 n n C5B O5B CAO sing 105 n n C5B H51A CAO sing 106 n n C5B H52A CAO sing 107 n n O5B P1A CAO sing 108 n n P1A O1A CAO doub 109 n n P1A O2A CAO sing 110 n n P1A O3A CAO sing 111 n n O2A HOA2 CAO sing 112 n n O3A P2A CAO sing 113 n n P2A O4A CAO doub 114 n n P2A O5A CAO sing 115 n n P2A O6A CAO sing 116 n n O5A HOA5 CAO sing 117 n n O6A CCP CAO sing 118 n n CBP CCP CAO sing 119 n n CBP CDP CAO sing 120 n n CBP CEP CAO sing 121 n n CBP CAP CAO sing 122 n n CCP H121 CAO sing 123 n n CCP H122 CAO sing 124 n n CDP H131 CAO sing 125 n n CDP H132 CAO sing 126 n n CDP H133 CAO sing 127 n n CEP H141 CAO sing 128 n n CEP H142 CAO sing 129 n n CEP H143 CAO sing 130 n n CAP OAP CAO sing 131 n n CAP C9P CAO sing 132 n n CAP H10 CAO sing 133 n n OAP HO1 CAO sing 134 n n C9P O9P CAO doub 135 n n C9P N8P CAO sing 136 n n N8P C7P CAO sing 137 n n N8P HN8 CAO sing 138 n n C7P C6P CAO sing 139 n n C7P H71 CAO sing 140 n n C7P H72 CAO sing 141 n n C6P C5P CAO sing 142 n n C6P H61 CAO sing 143 n n C6P H62 CAO sing 144 n n C5P O5P CAO doub 145 n n C5P N4P CAO sing 146 n n N4P C3P CAO sing 147 n n N4P HN4 CAO sing 148 n n C3P C2P CAO sing 149 n n C3P H31 CAO sing 150 n n C3P H32 CAO sing 151 n n C2P S1P CAO sing 152 n n C2P H21 CAO sing 153 n n C2P H22 CAO sing 154 n n S1P O1P CAO sing 155 n n O1P HOS1 CAO sing 156 n n # _atom_sites.entry_id 1EAD _atom_sites.fract_transf_matrix[1][1] 0.004434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CAO A 1 638 638 CAO CAO . C 3 HOH A 1 639 639 HOH HOH . C 3 HOH A 2 640 640 HOH HOH . C 3 HOH A 3 641 641 HOH HOH . C 3 HOH A 4 642 642 HOH HOH . C 3 HOH A 5 643 643 HOH HOH . C 3 HOH A 6 644 644 HOH HOH . C 3 HOH A 7 645 645 HOH HOH . C 3 HOH A 8 646 646 HOH HOH . C 3 HOH A 9 647 647 HOH HOH . C 3 HOH A 10 648 648 HOH HOH . C 3 HOH A 11 649 649 HOH HOH . C 3 HOH A 12 650 650 HOH HOH . C 3 HOH A 13 651 651 HOH HOH . C 3 HOH A 14 652 652 HOH HOH . C 3 HOH A 15 653 653 HOH HOH . C 3 HOH A 16 654 654 HOH HOH . C 3 HOH A 17 655 655 HOH HOH . C 3 HOH A 18 656 656 HOH HOH . C 3 HOH A 19 657 657 HOH HOH . C 3 HOH A 20 658 658 HOH HOH . C 3 HOH A 21 659 659 HOH HOH . C 3 HOH A 22 660 660 HOH HOH . C 3 HOH A 23 661 661 HOH HOH . C 3 HOH A 24 662 662 HOH HOH . C 3 HOH A 25 663 663 HOH HOH . C 3 HOH A 26 664 664 HOH HOH . C 3 HOH A 27 665 665 HOH HOH . C 3 HOH A 28 666 666 HOH HOH . C 3 HOH A 29 667 667 HOH HOH . C 3 HOH A 30 668 668 HOH HOH . C 3 HOH A 31 669 669 HOH HOH . C 3 HOH A 32 670 670 HOH HOH . C 3 HOH A 33 671 671 HOH HOH . C 3 HOH A 34 672 672 HOH HOH . C 3 HOH A 35 673 673 HOH HOH . C 3 HOH A 36 674 674 HOH HOH . C 3 HOH A 37 675 675 HOH HOH . C 3 HOH A 38 676 676 HOH HOH . C 3 HOH A 39 677 677 HOH HOH . C 3 HOH A 40 678 678 HOH HOH . C 3 HOH A 41 679 679 HOH HOH . C 3 HOH A 42 680 680 HOH HOH . C 3 HOH A 43 681 681 HOH HOH . C 3 HOH A 44 682 682 HOH HOH . C 3 HOH A 45 683 683 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A CAO . . . B 2 38.037 23.717 16.538 1 33.83 ? N1A CAO 638 A 1 HETATM 2 C C2A CAO . . . B 2 38.221 22.466 16.136 1 33.78 ? C2A CAO 638 A 1 HETATM 3 N N3A CAO . . . B 2 39.362 21.987 15.661 1 34.3 ? N3A CAO 638 A 1 HETATM 4 C C4A CAO . . . B 2 40.428 22.793 15.564 1 34.91 ? C4A CAO 638 A 1 HETATM 5 C C5A CAO . . . B 2 40.24 24.09 15.975 1 34.69 ? C5A CAO 638 A 1 HETATM 6 C C6A CAO . . . B 2 39.054 24.592 16.486 1 34.1 ? C6A CAO 638 A 1 HETATM 7 N N6A CAO . . . B 2 38.978 25.788 17.05 1 33.73 ? N6A CAO 638 A 1 HETATM 8 N N7A CAO . . . B 2 41.358 24.791 15.876 1 35.05 ? N7A CAO 638 A 1 HETATM 9 C C8A CAO . . . B 2 42.257 23.915 15.403 1 34.83 ? C8A CAO 638 A 1 HETATM 10 N N9A CAO . . . B 2 41.702 22.714 15.196 1 35.4 ? N9A CAO 638 A 1 HETATM 11 C C1B CAO . . . B 2 42.284 21.617 14.385 1 37.01 ? C1B CAO 638 A 1 HETATM 12 C C2B CAO . . . B 2 42.847 22.194 13.089 1 38.38 ? C2B CAO 638 A 1 HETATM 13 O O2B CAO . . . B 2 41.919 22.713 12.118 1 38.46 ? O2B CAO 638 A 1 HETATM 14 C C3B CAO . . . B 2 43.73 21.045 12.66 1 39.22 ? C3B CAO 638 A 1 HETATM 15 O O3B CAO . . . B 2 43.037 20.013 11.959 1 42.76 ? O3B CAO 638 A 1 HETATM 16 P P3B CAO . . . B 2 43.891 18.888 11.141 1 45.45 ? P3B CAO 638 A 1 HETATM 17 O O7A CAO . . . B 2 44.782 18.202 12.129 1 44.53 ? O7A CAO 638 A 1 HETATM 18 O O8A CAO . . . B 2 44.586 19.674 10.08 1 44.92 ? O8A CAO 638 A 1 HETATM 19 O O9A CAO . . . B 2 42.814 18.015 10.608 1 45.33 ? O9A CAO 638 A 1 HETATM 20 C C4B CAO . . . B 2 44.309 20.609 13.992 1 37.75 ? C4B CAO 638 A 1 HETATM 21 O O4B CAO . . . B 2 43.376 20.922 15.035 1 37.02 ? O4B CAO 638 A 1 HETATM 22 C C5B CAO . . . B 2 45.45 21.588 14.047 1 36.74 ? C5B CAO 638 A 1 HETATM 23 O O5B CAO . . . B 2 46.21 21.69 15.228 1 36.39 ? O5B CAO 638 A 1 HETATM 24 P P1A CAO . . . B 2 47.325 22.849 15.149 1 36.31 ? P1A CAO 638 A 1 HETATM 25 O O1A CAO . . . B 2 47.898 23.049 16.5 1 36.86 ? O1A CAO 638 A 1 HETATM 26 O O2A CAO . . . B 2 48.267 22.583 14.038 1 37.16 ? O2A CAO 638 A 1 HETATM 27 O O3A CAO . . . B 2 46.392 24.079 14.745 1 36.39 ? O3A CAO 638 A 1 HETATM 28 P P2A CAO . . . B 2 46.499 25.666 14.804 1 35.95 ? P2A CAO 638 A 1 HETATM 29 O O4A CAO . . . B 2 47.273 26.175 13.65 1 36.63 ? O4A CAO 638 A 1 HETATM 30 O O5A CAO . . . B 2 45.106 26.119 14.997 1 36.55 ? O5A CAO 638 A 1 HETATM 31 O O6A CAO . . . B 2 47.4 25.902 16.137 1 36.67 ? O6A CAO 638 A 1 HETATM 32 C CBP CAO . . . B 2 48.583 27.28 17.918 1 35.48 ? CBP CAO 638 A 1 HETATM 33 C CCP CAO . . . B 2 47.532 27.181 16.79 1 36.17 ? CCP CAO 638 A 1 HETATM 34 C CDP CAO . . . B 2 50.003 27.195 17.382 1 36.19 ? CDP CAO 638 A 1 HETATM 35 C CEP CAO . . . B 2 48.391 28.682 18.456 1 35.68 ? CEP CAO 638 A 1 HETATM 36 C CAP CAO . . . B 2 48.37 26.214 19.016 1 35.11 ? CAP CAO 638 A 1 HETATM 37 O OAP CAO . . . B 2 49.055 25.005 18.64 1 34.39 ? OAP CAO 638 A 1 HETATM 38 C C9P CAO . . . B 2 48.791 26.569 20.477 1 35.03 ? C9P CAO 638 A 1 HETATM 39 O O9P CAO . . . B 2 49.903 26.302 20.953 1 35.59 ? O9P CAO 638 A 1 HETATM 40 N N8P CAO . . . B 2 47.83 27.092 21.271 1 34.9 ? N8P CAO 638 A 1 HETATM 41 C C7P CAO . . . B 2 48.043 27.447 22.666 1 33.99 ? C7P CAO 638 A 1 HETATM 42 C C6P CAO . . . B 2 47.113 28.532 23.217 1 34.1 ? C6P CAO 638 A 1 HETATM 43 C C5P CAO . . . B 2 47.247 28.652 24.74 1 34.88 ? C5P CAO 638 A 1 HETATM 44 O O5P CAO . . . B 2 48.009 27.852 25.305 1 35.08 ? O5P CAO 638 A 1 HETATM 45 N N4P CAO . . . B 2 46.576 29.518 25.535 1 35.1 ? N4P CAO 638 A 1 HETATM 46 C C3P CAO . . . B 2 46.865 29.545 26.979 1 35.53 ? C3P CAO 638 A 1 HETATM 47 C C2P CAO . . . B 2 46.668 30.845 27.698 1 35.85 ? C2P CAO 638 A 1 HETATM 48 S S1P CAO . . . B 2 44.965 30.853 28.279 1 38.55 ? S1P CAO 638 A 1 HETATM 49 O O1P CAO . . . B 2 44.525 32.593 28.71 1 38.01 ? O1P CAO 638 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 49 #