data_1EAP # _model_server_result.job_id HYQsH4G4FhP4r5M1S1s7tQ _model_server_result.datetime_utc '2025-04-17 08:25:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1eap # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":222}' # _entry.id 1EAP # _exptl.entry_id 1EAP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.312 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.94 _cell.angle_gamma 90 _cell.entry_id 1EAP _cell.length_a 41.41 _cell.length_b 78.06 _cell.length_c 81.94 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EAP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 133 A CYS 134 1_555 A SG CYS 193 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 A SG CYS 213 A CYS 214 1_555 B SG CYS 134 B CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf5 B SG CYS 146 B CYS 151 1_555 B SG CYS 201 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? # _chem_comp.formula 'C15 H22 N O6 P' _chem_comp.formula_weight 343.312 _chem_comp.id HEP _chem_comp.mon_nstd_flag . _chem_comp.name PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 HEP sing 129 n n C1 N1 HEP sing 130 n n C1 P HEP sing 131 n n C1 H1 HEP sing 132 n n C2 C3 HEP sing 133 n n C2 H21 HEP sing 134 n n C2 H22 HEP sing 135 n n C3 C4 HEP sing 136 n n C3 H31 HEP sing 137 n n C3 H32 HEP sing 138 n n C4 C5 HEP sing 139 n n C4 H41 HEP sing 140 n n C4 H42 HEP sing 141 n n C5 H51 HEP sing 142 n n C5 H52 HEP sing 143 n n C5 H53 HEP sing 144 n n C6 C7 HEP doub 145 n y C6 C11 HEP sing 146 n y C6 H6 HEP sing 147 n n C7 C8 HEP sing 148 n y C7 H7 HEP sing 149 n n C8 C9 HEP doub 150 n y C8 H8 HEP sing 151 n n C9 C10 HEP sing 152 n y C9 H9 HEP sing 153 n n C10 C11 HEP doub 154 n y C10 H10 HEP sing 155 n n C11 O3P HEP sing 156 n n C12 C14 HEP sing 157 n n C12 O4 HEP doub 158 n n C12 N1 HEP sing 159 n n C13 C14 HEP sing 160 n n C13 C15 HEP sing 161 n n C13 H131 HEP sing 162 n n C13 H132 HEP sing 163 n n C14 H141 HEP sing 164 n n C14 H142 HEP sing 165 n n C15 O5 HEP doub 166 n n C15 O6 HEP sing 167 n n O1P P HEP doub 168 n n O2P P HEP sing 169 n n O2P HOP2 HEP sing 170 n n O3P P HEP sing 171 n n O6 HO6 HEP sing 172 n n N1 HN1 HEP sing 173 n n # _atom_sites.entry_id 1EAP _atom_sites.fract_transf_matrix[1][1] 0.024149 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002087 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id HEP _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 222 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id HEP _pdbx_nonpoly_scheme.auth_mon_id HEP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HEP . . . C 3 7.853 5.239 35.121 1 12.98 ? C1 HEP 222 B 1 HETATM 2 C C2 HEP . . . C 3 8.545 5.713 33.856 1 6.72 ? C2 HEP 222 B 1 HETATM 3 C C3 HEP . . . C 3 7.666 6.375 32.852 1 7.18 ? C3 HEP 222 B 1 HETATM 4 C C4 HEP . . . C 3 8.518 6.44 31.605 1 6.52 ? C4 HEP 222 B 1 HETATM 5 C C5 HEP . . . C 3 7.725 5.744 30.469 1 12.31 ? C5 HEP 222 B 1 HETATM 6 C C6 HEP . . . C 3 10.42 2.537 33.495 1 11.06 ? C6 HEP 222 B 1 HETATM 7 C C7 HEP . . . C 3 11.377 1.776 32.853 1 5.86 ? C7 HEP 222 B 1 HETATM 8 C C8 HEP . . . C 3 11.647 0.494 33.262 1 9.31 ? C8 HEP 222 B 1 HETATM 9 C C9 HEP . . . C 3 10.935 -0.038 34.327 1 15.88 ? C9 HEP 222 B 1 HETATM 10 C C10 HEP . . . C 3 9.967 0.711 34.978 1 12.16 ? C10 HEP 222 B 1 HETATM 11 C C11 HEP . . . C 3 9.711 2.001 34.556 1 15.01 ? C11 HEP 222 B 1 HETATM 12 C C12 HEP . . . C 3 6.41 6.762 36.352 1 22.96 ? C12 HEP 222 B 1 HETATM 13 C C13 HEP . . . C 3 5.491 8.889 37.517 1 40.15 ? C13 HEP 222 B 1 HETATM 14 C C14 HEP . . . C 3 6.53 7.767 37.492 1 30.12 ? C14 HEP 222 B 1 HETATM 15 C C15 HEP . . . C 3 5.939 10.152 36.781 1 44.14 ? C15 HEP 222 B 1 HETATM 16 O O1P HEP . . . C 3 10.337 4.632 35.593 1 2.66 ? O1P HEP 222 B 1 HETATM 17 O O2P HEP . . . C 3 8.623 4.082 37.371 1 8.65 ? O2P HEP 222 B 1 HETATM 18 O O3P HEP . . . C 3 8.708 2.751 35.211 1 13.99 ? O3P HEP 222 B 1 HETATM 19 O O4 HEP . . . C 3 5.445 6.006 36.277 1 18.84 ? O4 HEP 222 B 1 HETATM 20 O O5 HEP . . . C 3 5.853 10.204 35.544 1 47.55 ? O5 HEP 222 B 1 HETATM 21 O O6 HEP . . . C 3 6.255 11.136 37.465 1 41.52 ? O6 HEP 222 B 1 HETATM 22 N N1 HEP . . . C 3 7.613 6.316 36.062 1 17.07 ? N1 HEP 222 B 1 HETATM 23 P P HEP . . . C 3 8.974 4.201 35.927 1 16.7 ? P HEP 222 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 23 #