data_1EC0 # _model_server_result.job_id 8JVnuWJgd4mAFMKYMrnmkQ _model_server_result.datetime_utc '2025-02-27 02:41:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ec0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 1EC0 # _exptl.entry_id 1EC0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 688.714 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-[2,5-O-DI-2-FLUORO-BENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL] _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EC0 _cell.length_a 58.13 _cell.length_b 86.05 _cell.length_c 46.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EC0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C38 H38 F2 N2 O8' _chem_comp.formula_weight 688.714 _chem_comp.id BED _chem_comp.mon_nstd_flag . _chem_comp.name N,N-[2,5-O-DI-2-FLUORO-BENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL] _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'INHIBITOR BEA403' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 BED doub 70 n y C01 C06 BED sing 71 n y C01 C23 BED sing 72 n n C02 C03 BED sing 73 n y C02 H2 BED sing 74 n n C03 C04 BED doub 75 n y C03 H3 BED sing 76 n n C04 C05 BED sing 77 n y C04 H4 BED sing 78 n n C05 C06 BED doub 79 n y C05 H5 BED sing 80 n n C06 F49 BED sing 81 n n C07 C08 BED doub 82 n y C07 C12 BED sing 83 n y C07 C13 BED sing 84 n n C08 C09 BED sing 85 n y C08 F50 BED sing 86 n n C09 C10 BED doub 87 n y C09 H9 BED sing 88 n n C10 C11 BED sing 89 n y C10 H10 BED sing 90 n n C11 C12 BED doub 91 n y C11 H11 BED sing 92 n n C12 H12 BED sing 93 n n C13 O14 BED sing 94 n n C13 H131 BED sing 95 n n C13 H132 BED sing 96 n n O14 C15 BED sing 97 n n C15 C16 BED sing 98 n n C15 C26 BED sing 99 n n C15 H15 BED sing 100 n n C16 C17 BED sing 101 n n C16 O25 BED sing 102 n n C16 H16 BED sing 103 n n C17 C18 BED sing 104 n n C17 O24 BED sing 105 n n C17 H17 BED sing 106 n n C18 C19 BED sing 107 n n C18 O22 BED sing 108 n n C18 H18 BED sing 109 n n C19 O20 BED doub 110 n n C19 N21 BED sing 111 n n N21 C39 BED sing 112 n n N21 H21 BED sing 113 n n O22 C23 BED sing 114 n n C23 H231 BED sing 115 n n C23 H232 BED sing 116 n n O24 H24 BED sing 117 n n O25 H25 BED sing 118 n n C26 O27 BED doub 119 n n C26 N28 BED sing 120 n n N28 C29 BED sing 121 n n N28 H28 BED sing 122 n n C29 C30 BED sing 123 n n C29 C35 BED sing 124 n n C29 H29 BED sing 125 n n C30 C31 BED doub 126 n y C30 C32 BED sing 127 n y C31 C37 BED sing 128 n y C31 C38 BED sing 129 n n C32 C33 BED doub 130 n y C32 H32 BED sing 131 n n C33 C34 BED sing 132 n y C33 H33 BED sing 133 n n C34 C37 BED doub 134 n y C34 H34 BED sing 135 n n C35 O36 BED sing 136 n n C35 C38 BED sing 137 n n C35 H35 BED sing 138 n n O36 H36 BED sing 139 n n C37 H37 BED sing 140 n n C38 H381 BED sing 141 n n C38 H382 BED sing 142 n n C39 C40 BED sing 143 n n C39 C45 BED sing 144 n n C39 H39 BED sing 145 n n C40 C41 BED doub 146 n y C40 C42 BED sing 147 n y C41 C47 BED sing 148 n y C41 C48 BED sing 149 n n C42 C43 BED doub 150 n y C42 H42 BED sing 151 n n C43 C44 BED sing 152 n y C43 H43 BED sing 153 n n C44 C47 BED doub 154 n y C44 H44 BED sing 155 n n C45 O46 BED sing 156 n n C45 C48 BED sing 157 n n C45 H45 BED sing 158 n n O46 H46 BED sing 159 n n C47 H47 BED sing 160 n n C48 H481 BED sing 161 n n C48 H482 BED sing 162 n n # _atom_sites.entry_id 1EC0 _atom_sites.fract_transf_matrix[1][1] 0.017203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BED A 1 501 501 BED BED . D 3 HOH A 1 601 601 HOH HOH . D 3 HOH A 2 605 605 HOH HOH . D 3 HOH A 3 606 606 HOH HOH . D 3 HOH A 4 607 607 HOH HOH . D 3 HOH A 5 608 608 HOH HOH . D 3 HOH A 6 613 613 HOH HOH . D 3 HOH A 7 614 614 HOH HOH . D 3 HOH A 8 615 615 HOH HOH . D 3 HOH A 9 619 619 HOH HOH . D 3 HOH A 10 620 620 HOH HOH . D 3 HOH A 11 621 621 HOH HOH . D 3 HOH A 12 622 622 HOH HOH . D 3 HOH A 13 624 624 HOH HOH . D 3 HOH A 14 625 625 HOH HOH . D 3 HOH A 15 627 627 HOH HOH . D 3 HOH A 16 628 628 HOH HOH . D 3 HOH A 17 630 630 HOH HOH . D 3 HOH A 18 632 632 HOH HOH . D 3 HOH A 19 633 633 HOH HOH . D 3 HOH A 20 638 638 HOH HOH . D 3 HOH A 21 639 639 HOH HOH . D 3 HOH A 22 641 641 HOH HOH . D 3 HOH A 23 643 643 HOH HOH . D 3 HOH A 24 645 645 HOH HOH . D 3 HOH A 25 646 646 HOH HOH . D 3 HOH A 26 652 652 HOH HOH . D 3 HOH A 27 653 653 HOH HOH . D 3 HOH A 28 654 654 HOH HOH . D 3 HOH A 29 655 655 HOH HOH . D 3 HOH A 30 657 657 HOH HOH . D 3 HOH A 31 660 660 HOH HOH . D 3 HOH A 32 668 668 HOH HOH . D 3 HOH A 33 672 672 HOH HOH . D 3 HOH A 34 673 673 HOH HOH . D 3 HOH A 35 679 679 HOH HOH . D 3 HOH A 36 680 680 HOH HOH . D 3 HOH A 37 683 683 HOH HOH . D 3 HOH A 38 685 685 HOH HOH . D 3 HOH A 39 686 686 HOH HOH . D 3 HOH A 40 687 687 HOH HOH . D 3 HOH A 41 688 688 HOH HOH . D 3 HOH A 42 689 689 HOH HOH . D 3 HOH A 43 690 690 HOH HOH . D 3 HOH A 44 691 691 HOH HOH . D 3 HOH A 45 696 696 HOH HOH . D 3 HOH A 46 698 698 HOH HOH . D 3 HOH A 47 702 702 HOH HOH . E 3 HOH B 1 602 602 HOH HOH . E 3 HOH B 2 603 603 HOH HOH . E 3 HOH B 3 604 604 HOH HOH . E 3 HOH B 4 609 609 HOH HOH . E 3 HOH B 5 610 610 HOH HOH . E 3 HOH B 6 611 611 HOH HOH . E 3 HOH B 7 612 612 HOH HOH . E 3 HOH B 8 616 616 HOH HOH . E 3 HOH B 9 617 617 HOH HOH . E 3 HOH B 10 618 618 HOH HOH . E 3 HOH B 11 623 623 HOH HOH . E 3 HOH B 12 626 626 HOH HOH . E 3 HOH B 13 629 629 HOH HOH . E 3 HOH B 14 631 631 HOH HOH . E 3 HOH B 15 634 634 HOH HOH . E 3 HOH B 16 635 635 HOH HOH . E 3 HOH B 17 636 636 HOH HOH . E 3 HOH B 18 637 637 HOH HOH . E 3 HOH B 19 640 640 HOH HOH . E 3 HOH B 20 642 642 HOH HOH . E 3 HOH B 21 644 644 HOH HOH . E 3 HOH B 22 647 647 HOH HOH . E 3 HOH B 23 648 648 HOH HOH . E 3 HOH B 24 649 649 HOH HOH . E 3 HOH B 25 650 650 HOH HOH . E 3 HOH B 26 651 651 HOH HOH . E 3 HOH B 27 656 656 HOH HOH . E 3 HOH B 28 658 658 HOH HOH . E 3 HOH B 29 659 659 HOH HOH . E 3 HOH B 30 661 661 HOH HOH . E 3 HOH B 31 662 662 HOH HOH . E 3 HOH B 32 663 663 HOH HOH . E 3 HOH B 33 664 664 HOH HOH . E 3 HOH B 34 665 665 HOH HOH . E 3 HOH B 35 666 666 HOH HOH . E 3 HOH B 36 667 667 HOH HOH . E 3 HOH B 37 669 669 HOH HOH . E 3 HOH B 38 670 670 HOH HOH . E 3 HOH B 39 671 671 HOH HOH . E 3 HOH B 40 674 674 HOH HOH . E 3 HOH B 41 675 675 HOH HOH . E 3 HOH B 42 676 676 HOH HOH . E 3 HOH B 43 677 677 HOH HOH . E 3 HOH B 44 678 678 HOH HOH . E 3 HOH B 45 681 681 HOH HOH . E 3 HOH B 46 682 682 HOH HOH . E 3 HOH B 47 684 684 HOH HOH . E 3 HOH B 48 692 692 HOH HOH . E 3 HOH B 49 693 693 HOH HOH . E 3 HOH B 50 694 694 HOH HOH . E 3 HOH B 51 695 695 HOH HOH . E 3 HOH B 52 697 697 HOH HOH . E 3 HOH B 53 699 699 HOH HOH . E 3 HOH B 54 700 700 HOH HOH . E 3 HOH B 55 701 701 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 BED . . . C 2 16.56 22.074 8.736 1 16.31 ? C01 BED 501 A 1 HETATM 2 C C02 BED . . . C 2 17.971 21.882 8.481 1 15.8 ? C02 BED 501 A 1 HETATM 3 C C03 BED . . . C 2 18.66 20.712 8.898 1 17.1 ? C03 BED 501 A 1 HETATM 4 C C04 BED . . . C 2 17.951 19.669 9.599 1 17.58 ? C04 BED 501 A 1 HETATM 5 C C05 BED . . . C 2 16.551 19.816 9.872 1 17.31 ? C05 BED 501 A 1 HETATM 6 C C06 BED . . . C 2 15.865 21.01 9.443 1 17.32 ? C06 BED 501 A 1 HETATM 7 C C07 BED . . . C 2 9.83 23.868 2.296 1 13.45 ? C07 BED 501 A 1 HETATM 8 C C08 BED . . . C 2 8.811 22.936 2.738 1 13.68 ? C08 BED 501 A 1 HETATM 9 C C09 BED . . . C 2 7.425 23.329 2.733 1 14.43 ? C09 BED 501 A 1 HETATM 10 C C10 BED . . . C 2 7.05 24.644 2.288 1 17.89 ? C10 BED 501 A 1 HETATM 11 C C11 BED . . . C 2 8.062 25.571 1.848 1 15.37 ? C11 BED 501 A 1 HETATM 12 C C12 BED . . . C 2 9.434 25.185 1.855 1 13.83 ? C12 BED 501 A 1 HETATM 13 C C13 BED . . . C 2 11.311 23.487 2.303 1 12.55 ? C13 BED 501 A 1 HETATM 14 O O14 BED . . . C 2 11.793 23.112 3.608 1 15.07 ? O14 BED 501 A 1 HETATM 15 C C15 BED . . . C 2 11.895 24.225 4.551 1 15.49 ? C15 BED 501 A 1 HETATM 16 C C16 BED . . . C 2 12.955 23.976 5.586 1 16.72 ? C16 BED 501 A 1 HETATM 17 C C17 BED . . . C 2 14.257 23.622 4.98 1 16.11 ? C17 BED 501 A 1 HETATM 18 C C18 BED . . . C 2 15.132 22.849 6 1 13.26 ? C18 BED 501 A 1 HETATM 19 C C19 BED . . . C 2 15.141 21.347 5.831 1 11.98 ? C19 BED 501 A 1 HETATM 20 O O20 BED . . . C 2 14.131 20.655 6 1 13.24 ? O20 BED 501 A 1 HETATM 21 N N21 BED . . . C 2 16.359 20.79 5.495 1 11.14 ? N21 BED 501 A 1 HETATM 22 O O22 BED . . . C 2 14.777 23.125 7.384 1 16.79 ? O22 BED 501 A 1 HETATM 23 C C23 BED . . . C 2 15.89 23.353 8.252 1 15.37 ? C23 BED 501 A 1 HETATM 24 O O24 BED . . . C 2 14.813 24.877 4.561 1 14.5 ? O24 BED 501 A 1 HETATM 25 O O25 BED . . . C 2 13.117 25.102 6.493 1 19.69 ? O25 BED 501 A 1 HETATM 26 C C26 BED . . . C 2 10.68 24.321 5.386 1 15.83 ? C26 BED 501 A 1 HETATM 27 O O27 BED . . . C 2 10.295 23.331 6.01 1 16.44 ? O27 BED 501 A 1 HETATM 28 N N28 BED . . . C 2 10.042 25.514 5.409 1 11.13 ? N28 BED 501 A 1 HETATM 29 C C29 BED . . . C 2 8.853 25.718 6.184 1 11.72 ? C29 BED 501 A 1 HETATM 30 C C30 BED . . . C 2 9.142 26.445 7.468 1 14.07 ? C30 BED 501 A 1 HETATM 31 C C31 BED . . . C 2 8.041 27.285 7.816 1 12.35 ? C31 BED 501 A 1 HETATM 32 C C32 BED . . . C 2 10.315 26.396 8.319 1 13.7 ? C32 BED 501 A 1 HETATM 33 C C33 BED . . . C 2 10.354 27.203 9.515 1 14.45 ? C33 BED 501 A 1 HETATM 34 C C34 BED . . . C 2 9.227 28.044 9.848 1 12.93 ? C34 BED 501 A 1 HETATM 35 C C35 BED . . . C 2 7.763 26.609 5.57 1 10.46 ? C35 BED 501 A 1 HETATM 36 O O36 BED . . . C 2 8.414 27.665 4.869 1 10.96 ? O36 BED 501 A 1 HETATM 37 C C37 BED . . . C 2 8.059 28.092 8.999 1 16.08 ? C37 BED 501 A 1 HETATM 38 C C38 BED . . . C 2 6.969 27.158 6.782 1 10.58 ? C38 BED 501 A 1 HETATM 39 C C39 BED . . . C 2 16.603 19.37 5.296 1 10.05 ? C39 BED 501 A 1 HETATM 40 C C40 BED . . . C 2 16.508 18.938 3.854 1 9.88 ? C40 BED 501 A 1 HETATM 41 C C41 BED . . . C 2 17.432 17.886 3.583 1 10.51 ? C41 BED 501 A 1 HETATM 42 C C42 BED . . . C 2 15.655 19.435 2.807 1 9.92 ? C42 BED 501 A 1 HETATM 43 C C43 BED . . . C 2 15.755 18.848 1.488 1 12.5 ? C43 BED 501 A 1 HETATM 44 C C44 BED . . . C 2 16.688 17.793 1.235 1 12.61 ? C44 BED 501 A 1 HETATM 45 C C45 BED . . . C 2 18.003 18.855 5.663 1 8.8 ? C45 BED 501 A 1 HETATM 46 O O46 BED . . . C 2 18.946 19.889 5.335 1 10.86 ? O46 BED 501 A 1 HETATM 47 C C47 BED . . . C 2 17.54 17.296 2.276 1 11.27 ? C47 BED 501 A 1 HETATM 48 C C48 BED . . . C 2 18.195 17.557 4.822 1 8.53 ? C48 BED 501 A 1 HETATM 49 F F49 BED . . . C 2 14.585 21.066 9.727 1 25.63 ? F49 BED 501 A 1 HETATM 50 F F50 BED . . . C 2 9.131 21.732 3.153 1 18.71 ? F50 BED 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #