data_1EFC # _model_server_result.job_id 9iRTTYxBd8PwytGbbcWoSg _model_server_result.datetime_utc '2024-11-01 11:31:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1efc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":513}' # _entry.id 1EFC # _exptl.entry_id 1EFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EFC _cell.length_a 243.12 _cell.length_b 61.08 _cell.length_c 66.91 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EFC _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 25 A THR 25 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc2 C MG MG . A MG 501 1_555 D O2B GDP . A GDP 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc3 C MG MG . A MG 501 1_555 G O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc4 C MG MG . A MG 501 1_555 G O HOH . A HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc5 C MG MG . A MG 501 1_555 G O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc6 C MG MG . A MG 501 1_555 G O HOH . A HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc7 B OG1 THR 25 B THR 25 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc8 E MG MG . B MG 502 1_555 F O2B GDP . B GDP 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc9 E MG MG . B MG 502 1_555 H O HOH . B HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc10 E MG MG . B MG 502 1_555 H O HOH . B HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc11 E MG MG . B MG 502 1_555 H O HOH . B HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc12 E MG MG . B MG 502 1_555 H O HOH . B HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 1EFC _atom_sites.fract_transf_matrix[1][1] 0.004113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 501 1 MG MG . D 3 GDP A 1 513 513 GDP GDP . E 2 MG B 1 502 2 MG MG . F 3 GDP B 1 514 514 GDP GDP . G 4 HOH A 1 514 11 HOH HOH . G 4 HOH A 2 515 13 HOH HOH . G 4 HOH A 3 516 14 HOH HOH . G 4 HOH A 4 517 15 HOH HOH . G 4 HOH A 5 518 16 HOH HOH . G 4 HOH A 6 519 17 HOH HOH . G 4 HOH A 7 520 21 HOH HOH . G 4 HOH A 8 521 23 HOH HOH . G 4 HOH A 9 522 24 HOH HOH . G 4 HOH A 10 523 25 HOH HOH . G 4 HOH A 11 524 30 HOH HOH . G 4 HOH A 12 525 31 HOH HOH . G 4 HOH A 13 526 32 HOH HOH . G 4 HOH A 14 527 33 HOH HOH . G 4 HOH A 15 528 34 HOH HOH . G 4 HOH A 16 529 35 HOH HOH . G 4 HOH A 17 530 37 HOH HOH . G 4 HOH A 18 531 40 HOH HOH . G 4 HOH A 19 532 41 HOH HOH . G 4 HOH A 20 533 42 HOH HOH . G 4 HOH A 21 534 43 HOH HOH . G 4 HOH A 22 535 44 HOH HOH . G 4 HOH A 23 536 45 HOH HOH . G 4 HOH A 24 537 46 HOH HOH . G 4 HOH A 25 538 47 HOH HOH . G 4 HOH A 26 539 49 HOH HOH . G 4 HOH A 27 540 50 HOH HOH . G 4 HOH A 28 541 52 HOH HOH . G 4 HOH A 29 542 53 HOH HOH . G 4 HOH A 30 543 57 HOH HOH . G 4 HOH A 31 544 60 HOH HOH . G 4 HOH A 32 545 61 HOH HOH . G 4 HOH A 33 546 63 HOH HOH . G 4 HOH A 34 547 64 HOH HOH . G 4 HOH A 35 548 69 HOH HOH . G 4 HOH A 36 549 73 HOH HOH . G 4 HOH A 37 550 75 HOH HOH . G 4 HOH A 38 551 78 HOH HOH . G 4 HOH A 39 552 79 HOH HOH . G 4 HOH A 40 553 81 HOH HOH . G 4 HOH A 41 554 82 HOH HOH . G 4 HOH A 42 555 83 HOH HOH . G 4 HOH A 43 556 84 HOH HOH . G 4 HOH A 44 557 86 HOH HOH . G 4 HOH A 45 558 87 HOH HOH . G 4 HOH A 46 559 90 HOH HOH . G 4 HOH A 47 560 91 HOH HOH . G 4 HOH A 48 561 92 HOH HOH . G 4 HOH A 49 562 95 HOH HOH . G 4 HOH A 50 563 97 HOH HOH . G 4 HOH A 51 564 98 HOH HOH . G 4 HOH A 52 565 99 HOH HOH . G 4 HOH A 53 566 102 HOH HOH . G 4 HOH A 54 567 103 HOH HOH . G 4 HOH A 55 568 104 HOH HOH . G 4 HOH A 56 569 105 HOH HOH . G 4 HOH A 57 570 106 HOH HOH . G 4 HOH A 58 571 107 HOH HOH . G 4 HOH A 59 572 108 HOH HOH . G 4 HOH A 60 573 109 HOH HOH . G 4 HOH A 61 574 111 HOH HOH . G 4 HOH A 62 575 114 HOH HOH . G 4 HOH A 63 576 115 HOH HOH . G 4 HOH A 64 577 117 HOH HOH . G 4 HOH A 65 578 118 HOH HOH . G 4 HOH A 66 579 120 HOH HOH . G 4 HOH A 67 580 121 HOH HOH . G 4 HOH A 68 581 122 HOH HOH . G 4 HOH A 69 582 124 HOH HOH . G 4 HOH A 70 583 125 HOH HOH . G 4 HOH A 71 584 126 HOH HOH . G 4 HOH A 72 585 127 HOH HOH . G 4 HOH A 73 586 129 HOH HOH . G 4 HOH A 74 587 132 HOH HOH . G 4 HOH A 75 588 133 HOH HOH . G 4 HOH A 76 589 134 HOH HOH . G 4 HOH A 77 590 135 HOH HOH . G 4 HOH A 78 591 136 HOH HOH . G 4 HOH A 79 592 138 HOH HOH . G 4 HOH A 80 593 139 HOH HOH . G 4 HOH A 81 594 142 HOH HOH . G 4 HOH A 82 595 144 HOH HOH . G 4 HOH A 83 596 146 HOH HOH . G 4 HOH A 84 597 147 HOH HOH . G 4 HOH A 85 598 148 HOH HOH . G 4 HOH A 86 599 150 HOH HOH . G 4 HOH A 87 600 151 HOH HOH . G 4 HOH A 88 601 153 HOH HOH . G 4 HOH A 89 602 154 HOH HOH . G 4 HOH A 90 603 155 HOH HOH . G 4 HOH A 91 604 156 HOH HOH . G 4 HOH A 92 605 157 HOH HOH . G 4 HOH A 93 606 159 HOH HOH . G 4 HOH A 94 607 160 HOH HOH . G 4 HOH A 95 608 161 HOH HOH . G 4 HOH A 96 609 163 HOH HOH . G 4 HOH A 97 610 164 HOH HOH . G 4 HOH A 98 611 165 HOH HOH . G 4 HOH A 99 612 167 HOH HOH . G 4 HOH A 100 613 168 HOH HOH . G 4 HOH A 101 614 170 HOH HOH . G 4 HOH A 102 615 171 HOH HOH . G 4 HOH A 103 616 173 HOH HOH . G 4 HOH A 104 617 175 HOH HOH . G 4 HOH A 105 618 180 HOH HOH . G 4 HOH A 106 619 182 HOH HOH . G 4 HOH A 107 620 184 HOH HOH . G 4 HOH A 108 621 186 HOH HOH . G 4 HOH A 109 622 187 HOH HOH . G 4 HOH A 110 623 189 HOH HOH . G 4 HOH A 111 624 190 HOH HOH . G 4 HOH A 112 625 191 HOH HOH . G 4 HOH A 113 626 192 HOH HOH . G 4 HOH A 114 627 198 HOH HOH . G 4 HOH A 115 628 201 HOH HOH . G 4 HOH A 116 629 203 HOH HOH . G 4 HOH A 117 630 204 HOH HOH . G 4 HOH A 118 631 207 HOH HOH . G 4 HOH A 119 632 208 HOH HOH . G 4 HOH A 120 633 209 HOH HOH . G 4 HOH A 121 634 213 HOH HOH . G 4 HOH A 122 635 214 HOH HOH . G 4 HOH A 123 636 215 HOH HOH . G 4 HOH A 124 637 216 HOH HOH . G 4 HOH A 125 638 217 HOH HOH . G 4 HOH A 126 639 218 HOH HOH . G 4 HOH A 127 640 219 HOH HOH . G 4 HOH A 128 641 222 HOH HOH . G 4 HOH A 129 642 224 HOH HOH . G 4 HOH A 130 643 225 HOH HOH . G 4 HOH A 131 644 227 HOH HOH . G 4 HOH A 132 645 229 HOH HOH . G 4 HOH A 133 646 230 HOH HOH . G 4 HOH A 134 647 231 HOH HOH . G 4 HOH A 135 648 232 HOH HOH . G 4 HOH A 136 649 233 HOH HOH . G 4 HOH A 137 650 236 HOH HOH . G 4 HOH A 138 651 237 HOH HOH . G 4 HOH A 139 652 238 HOH HOH . G 4 HOH A 140 653 239 HOH HOH . G 4 HOH A 141 654 241 HOH HOH . G 4 HOH A 142 655 242 HOH HOH . G 4 HOH A 143 656 248 HOH HOH . G 4 HOH A 144 657 250 HOH HOH . G 4 HOH A 145 658 254 HOH HOH . G 4 HOH A 146 659 258 HOH HOH . G 4 HOH A 147 660 259 HOH HOH . G 4 HOH A 148 661 263 HOH HOH . G 4 HOH A 149 662 265 HOH HOH . G 4 HOH A 150 663 268 HOH HOH . G 4 HOH A 151 664 269 HOH HOH . G 4 HOH A 152 665 274 HOH HOH . G 4 HOH A 153 666 277 HOH HOH . G 4 HOH A 154 667 279 HOH HOH . G 4 HOH A 155 668 281 HOH HOH . G 4 HOH A 156 669 284 HOH HOH . G 4 HOH A 157 670 285 HOH HOH . G 4 HOH A 158 671 287 HOH HOH . G 4 HOH A 159 672 294 HOH HOH . G 4 HOH A 160 673 298 HOH HOH . G 4 HOH A 161 674 299 HOH HOH . G 4 HOH A 162 675 300 HOH HOH . G 4 HOH A 163 676 301 HOH HOH . G 4 HOH A 164 677 302 HOH HOH . G 4 HOH A 165 678 303 HOH HOH . G 4 HOH A 166 679 306 HOH HOH . G 4 HOH A 167 680 308 HOH HOH . G 4 HOH A 168 681 309 HOH HOH . G 4 HOH A 169 682 316 HOH HOH . G 4 HOH A 170 683 319 HOH HOH . G 4 HOH A 171 684 321 HOH HOH . G 4 HOH A 172 685 322 HOH HOH . G 4 HOH A 173 686 324 HOH HOH . G 4 HOH A 174 687 326 HOH HOH . G 4 HOH A 175 688 328 HOH HOH . G 4 HOH A 176 689 330 HOH HOH . G 4 HOH A 177 690 332 HOH HOH . G 4 HOH A 178 691 334 HOH HOH . G 4 HOH A 179 692 337 HOH HOH . G 4 HOH A 180 693 340 HOH HOH . G 4 HOH A 181 694 342 HOH HOH . G 4 HOH A 182 695 343 HOH HOH . G 4 HOH A 183 696 346 HOH HOH . G 4 HOH A 184 697 347 HOH HOH . G 4 HOH A 185 698 348 HOH HOH . G 4 HOH A 186 699 351 HOH HOH . G 4 HOH A 187 700 352 HOH HOH . G 4 HOH A 188 701 353 HOH HOH . G 4 HOH A 189 702 354 HOH HOH . G 4 HOH A 190 703 357 HOH HOH . G 4 HOH A 191 704 358 HOH HOH . G 4 HOH A 192 705 360 HOH HOH . G 4 HOH A 193 706 361 HOH HOH . G 4 HOH A 194 707 362 HOH HOH . G 4 HOH A 195 708 366 HOH HOH . G 4 HOH A 196 709 367 HOH HOH . G 4 HOH A 197 710 368 HOH HOH . G 4 HOH A 198 711 369 HOH HOH . G 4 HOH A 199 712 370 HOH HOH . G 4 HOH A 200 713 374 HOH HOH . G 4 HOH A 201 714 377 HOH HOH . G 4 HOH A 202 715 379 HOH HOH . G 4 HOH A 203 716 381 HOH HOH . G 4 HOH A 204 717 382 HOH HOH . G 4 HOH A 205 718 383 HOH HOH . G 4 HOH A 206 719 384 HOH HOH . G 4 HOH A 207 720 386 HOH HOH . G 4 HOH A 208 721 388 HOH HOH . G 4 HOH A 209 722 391 HOH HOH . G 4 HOH A 210 723 395 HOH HOH . G 4 HOH A 211 724 397 HOH HOH . G 4 HOH A 212 725 398 HOH HOH . G 4 HOH A 213 726 402 HOH HOH . G 4 HOH A 214 727 403 HOH HOH . G 4 HOH A 215 728 404 HOH HOH . G 4 HOH A 216 729 405 HOH HOH . G 4 HOH A 217 730 409 HOH HOH . G 4 HOH A 218 731 415 HOH HOH . G 4 HOH A 219 732 416 HOH HOH . G 4 HOH A 220 733 417 HOH HOH . G 4 HOH A 221 734 421 HOH HOH . G 4 HOH A 222 735 423 HOH HOH . G 4 HOH A 223 736 425 HOH HOH . G 4 HOH A 224 737 429 HOH HOH . G 4 HOH A 225 738 433 HOH HOH . G 4 HOH A 226 739 434 HOH HOH . G 4 HOH A 227 740 435 HOH HOH . G 4 HOH A 228 741 438 HOH HOH . G 4 HOH A 229 742 440 HOH HOH . G 4 HOH A 230 743 442 HOH HOH . G 4 HOH A 231 744 444 HOH HOH . G 4 HOH A 232 745 445 HOH HOH . H 4 HOH B 1 515 1 HOH HOH . H 4 HOH B 2 516 2 HOH HOH . H 4 HOH B 3 517 3 HOH HOH . H 4 HOH B 4 518 4 HOH HOH . H 4 HOH B 5 519 5 HOH HOH . H 4 HOH B 6 520 6 HOH HOH . H 4 HOH B 7 521 7 HOH HOH . H 4 HOH B 8 522 8 HOH HOH . H 4 HOH B 9 523 9 HOH HOH . H 4 HOH B 10 524 10 HOH HOH . H 4 HOH B 11 525 12 HOH HOH . H 4 HOH B 12 526 18 HOH HOH . H 4 HOH B 13 527 19 HOH HOH . H 4 HOH B 14 528 20 HOH HOH . H 4 HOH B 15 529 22 HOH HOH . H 4 HOH B 16 530 26 HOH HOH . H 4 HOH B 17 531 27 HOH HOH . H 4 HOH B 18 532 28 HOH HOH . H 4 HOH B 19 533 29 HOH HOH . H 4 HOH B 20 534 36 HOH HOH . H 4 HOH B 21 535 38 HOH HOH . H 4 HOH B 22 536 39 HOH HOH . H 4 HOH B 23 537 48 HOH HOH . H 4 HOH B 24 538 51 HOH HOH . H 4 HOH B 25 539 54 HOH HOH . H 4 HOH B 26 540 55 HOH HOH . H 4 HOH B 27 541 56 HOH HOH . H 4 HOH B 28 542 58 HOH HOH . H 4 HOH B 29 543 59 HOH HOH . H 4 HOH B 30 544 62 HOH HOH . H 4 HOH B 31 545 65 HOH HOH . H 4 HOH B 32 546 66 HOH HOH . H 4 HOH B 33 547 67 HOH HOH . H 4 HOH B 34 548 68 HOH HOH . H 4 HOH B 35 549 70 HOH HOH . H 4 HOH B 36 550 71 HOH HOH . H 4 HOH B 37 551 72 HOH HOH . H 4 HOH B 38 552 74 HOH HOH . H 4 HOH B 39 553 76 HOH HOH . H 4 HOH B 40 554 77 HOH HOH . H 4 HOH B 41 555 80 HOH HOH . H 4 HOH B 42 556 85 HOH HOH . H 4 HOH B 43 557 88 HOH HOH . H 4 HOH B 44 558 89 HOH HOH . H 4 HOH B 45 559 93 HOH HOH . H 4 HOH B 46 560 94 HOH HOH . H 4 HOH B 47 561 96 HOH HOH . H 4 HOH B 48 562 100 HOH HOH . H 4 HOH B 49 563 101 HOH HOH . H 4 HOH B 50 564 110 HOH HOH . H 4 HOH B 51 565 112 HOH HOH . H 4 HOH B 52 566 113 HOH HOH . H 4 HOH B 53 567 116 HOH HOH . H 4 HOH B 54 568 119 HOH HOH . H 4 HOH B 55 569 123 HOH HOH . H 4 HOH B 56 570 128 HOH HOH . H 4 HOH B 57 571 130 HOH HOH . H 4 HOH B 58 572 131 HOH HOH . H 4 HOH B 59 573 137 HOH HOH . H 4 HOH B 60 574 140 HOH HOH . H 4 HOH B 61 575 141 HOH HOH . H 4 HOH B 62 576 143 HOH HOH . H 4 HOH B 63 577 145 HOH HOH . H 4 HOH B 64 578 149 HOH HOH . H 4 HOH B 65 579 152 HOH HOH . H 4 HOH B 66 580 158 HOH HOH . H 4 HOH B 67 581 162 HOH HOH . H 4 HOH B 68 582 166 HOH HOH . H 4 HOH B 69 583 169 HOH HOH . H 4 HOH B 70 584 172 HOH HOH . H 4 HOH B 71 585 174 HOH HOH . H 4 HOH B 72 586 176 HOH HOH . H 4 HOH B 73 587 177 HOH HOH . H 4 HOH B 74 588 178 HOH HOH . H 4 HOH B 75 589 179 HOH HOH . H 4 HOH B 76 590 181 HOH HOH . H 4 HOH B 77 591 183 HOH HOH . H 4 HOH B 78 592 185 HOH HOH . H 4 HOH B 79 593 188 HOH HOH . H 4 HOH B 80 594 193 HOH HOH . H 4 HOH B 81 595 194 HOH HOH . H 4 HOH B 82 596 195 HOH HOH . H 4 HOH B 83 597 196 HOH HOH . H 4 HOH B 84 598 197 HOH HOH . H 4 HOH B 85 599 199 HOH HOH . H 4 HOH B 86 600 200 HOH HOH . H 4 HOH B 87 601 202 HOH HOH . H 4 HOH B 88 602 205 HOH HOH . H 4 HOH B 89 603 206 HOH HOH . H 4 HOH B 90 604 210 HOH HOH . H 4 HOH B 91 605 211 HOH HOH . H 4 HOH B 92 606 212 HOH HOH . H 4 HOH B 93 607 220 HOH HOH . H 4 HOH B 94 608 221 HOH HOH . H 4 HOH B 95 609 223 HOH HOH . H 4 HOH B 96 610 226 HOH HOH . H 4 HOH B 97 611 228 HOH HOH . H 4 HOH B 98 612 234 HOH HOH . H 4 HOH B 99 613 235 HOH HOH . H 4 HOH B 100 614 240 HOH HOH . H 4 HOH B 101 615 243 HOH HOH . H 4 HOH B 102 616 244 HOH HOH . H 4 HOH B 103 617 245 HOH HOH . H 4 HOH B 104 618 246 HOH HOH . H 4 HOH B 105 619 247 HOH HOH . H 4 HOH B 106 620 249 HOH HOH . H 4 HOH B 107 621 251 HOH HOH . H 4 HOH B 108 622 252 HOH HOH . H 4 HOH B 109 623 253 HOH HOH . H 4 HOH B 110 624 255 HOH HOH . H 4 HOH B 111 625 256 HOH HOH . H 4 HOH B 112 626 257 HOH HOH . H 4 HOH B 113 627 260 HOH HOH . H 4 HOH B 114 628 261 HOH HOH . H 4 HOH B 115 629 262 HOH HOH . H 4 HOH B 116 630 264 HOH HOH . H 4 HOH B 117 631 266 HOH HOH . H 4 HOH B 118 632 267 HOH HOH . H 4 HOH B 119 633 270 HOH HOH . H 4 HOH B 120 634 271 HOH HOH . H 4 HOH B 121 635 272 HOH HOH . H 4 HOH B 122 636 273 HOH HOH . H 4 HOH B 123 637 275 HOH HOH . H 4 HOH B 124 638 276 HOH HOH . H 4 HOH B 125 639 278 HOH HOH . H 4 HOH B 126 640 280 HOH HOH . H 4 HOH B 127 641 282 HOH HOH . H 4 HOH B 128 642 283 HOH HOH . H 4 HOH B 129 643 286 HOH HOH . H 4 HOH B 130 644 288 HOH HOH . H 4 HOH B 131 645 289 HOH HOH . H 4 HOH B 132 646 290 HOH HOH . H 4 HOH B 133 647 291 HOH HOH . H 4 HOH B 134 648 292 HOH HOH . H 4 HOH B 135 649 293 HOH HOH . H 4 HOH B 136 650 295 HOH HOH . H 4 HOH B 137 651 296 HOH HOH . H 4 HOH B 138 652 297 HOH HOH . H 4 HOH B 139 653 304 HOH HOH . H 4 HOH B 140 654 305 HOH HOH . H 4 HOH B 141 655 307 HOH HOH . H 4 HOH B 142 656 310 HOH HOH . H 4 HOH B 143 657 311 HOH HOH . H 4 HOH B 144 658 312 HOH HOH . H 4 HOH B 145 659 313 HOH HOH . H 4 HOH B 146 660 314 HOH HOH . H 4 HOH B 147 661 315 HOH HOH . H 4 HOH B 148 662 317 HOH HOH . H 4 HOH B 149 663 318 HOH HOH . H 4 HOH B 150 664 320 HOH HOH . H 4 HOH B 151 665 323 HOH HOH . H 4 HOH B 152 666 325 HOH HOH . H 4 HOH B 153 667 327 HOH HOH . H 4 HOH B 154 668 329 HOH HOH . H 4 HOH B 155 669 331 HOH HOH . H 4 HOH B 156 670 333 HOH HOH . H 4 HOH B 157 671 335 HOH HOH . H 4 HOH B 158 672 336 HOH HOH . H 4 HOH B 159 673 338 HOH HOH . H 4 HOH B 160 674 339 HOH HOH . H 4 HOH B 161 675 341 HOH HOH . H 4 HOH B 162 676 344 HOH HOH . H 4 HOH B 163 677 345 HOH HOH . H 4 HOH B 164 678 349 HOH HOH . H 4 HOH B 165 679 350 HOH HOH . H 4 HOH B 166 680 355 HOH HOH . H 4 HOH B 167 681 356 HOH HOH . H 4 HOH B 168 682 359 HOH HOH . H 4 HOH B 169 683 363 HOH HOH . H 4 HOH B 170 684 364 HOH HOH . H 4 HOH B 171 685 365 HOH HOH . H 4 HOH B 172 686 371 HOH HOH . H 4 HOH B 173 687 372 HOH HOH . H 4 HOH B 174 688 373 HOH HOH . H 4 HOH B 175 689 375 HOH HOH . H 4 HOH B 176 690 376 HOH HOH . H 4 HOH B 177 691 378 HOH HOH . H 4 HOH B 178 692 380 HOH HOH . H 4 HOH B 179 693 385 HOH HOH . H 4 HOH B 180 694 387 HOH HOH . H 4 HOH B 181 695 389 HOH HOH . H 4 HOH B 182 696 390 HOH HOH . H 4 HOH B 183 697 392 HOH HOH . H 4 HOH B 184 698 393 HOH HOH . H 4 HOH B 185 699 394 HOH HOH . H 4 HOH B 186 700 396 HOH HOH . H 4 HOH B 187 701 399 HOH HOH . H 4 HOH B 188 702 400 HOH HOH . H 4 HOH B 189 703 401 HOH HOH . H 4 HOH B 190 704 406 HOH HOH . H 4 HOH B 191 705 407 HOH HOH . H 4 HOH B 192 706 408 HOH HOH . H 4 HOH B 193 707 410 HOH HOH . H 4 HOH B 194 708 411 HOH HOH . H 4 HOH B 195 709 412 HOH HOH . H 4 HOH B 196 710 413 HOH HOH . H 4 HOH B 197 711 414 HOH HOH . H 4 HOH B 198 712 418 HOH HOH . H 4 HOH B 199 713 419 HOH HOH . H 4 HOH B 200 714 420 HOH HOH . H 4 HOH B 201 715 422 HOH HOH . H 4 HOH B 202 716 424 HOH HOH . H 4 HOH B 203 717 426 HOH HOH . H 4 HOH B 204 718 427 HOH HOH . H 4 HOH B 205 719 428 HOH HOH . H 4 HOH B 206 720 430 HOH HOH . H 4 HOH B 207 721 431 HOH HOH . H 4 HOH B 208 722 432 HOH HOH . H 4 HOH B 209 723 436 HOH HOH . H 4 HOH B 210 724 437 HOH HOH . H 4 HOH B 211 725 439 HOH HOH . H 4 HOH B 212 726 441 HOH HOH . H 4 HOH B 213 727 443 HOH HOH . H 4 HOH B 214 728 446 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . D 3 38.728 27.907 21.981 1 14.14 ? PB GDP 513 A 1 HETATM 2 O O1B GDP . . . D 3 39.797 28.963 21.717 1 11.43 ? O1B GDP 513 A 1 HETATM 3 O O2B GDP . . . D 3 37.696 27.782 21.005 1 11.6 ? O2B GDP 513 A 1 HETATM 4 O O3B GDP . . . D 3 39.402 26.627 22.443 1 12.73 ? O3B GDP 513 A 1 HETATM 5 O O3A GDP . . . D 3 38.049 28.44 23.359 1 13.84 ? O3A GDP 513 A 1 HETATM 6 P PA GDP . . . D 3 36.473 28.464 23.624 1 16.81 ? PA GDP 513 A 1 HETATM 7 O O1A GDP . . . D 3 35.748 29.463 22.787 1 15.89 ? O1A GDP 513 A 1 HETATM 8 O O2A GDP . . . D 3 35.978 27.066 23.592 1 16.46 ? O2A GDP 513 A 1 HETATM 9 O O5' GDP . . . D 3 36.541 28.996 25.148 1 17.75 ? O5' GDP 513 A 1 HETATM 10 C C5' GDP . . . D 3 37.315 28.27 26.124 1 17.95 ? C5' GDP 513 A 1 HETATM 11 C C4' GDP . . . D 3 36.643 28.493 27.487 1 18.59 ? C4' GDP 513 A 1 HETATM 12 O O4' GDP . . . D 3 36.859 29.881 27.8 1 17.76 ? O4' GDP 513 A 1 HETATM 13 C C3' GDP . . . D 3 35.129 28.294 27.582 1 19.82 ? C3' GDP 513 A 1 HETATM 14 O O3' GDP . . . D 3 34.781 27.978 28.94 1 19.5 ? O3' GDP 513 A 1 HETATM 15 C C2' GDP . . . D 3 34.56 29.713 27.349 1 19.8 ? C2' GDP 513 A 1 HETATM 16 O O2' GDP . . . D 3 33.258 29.938 27.922 1 20.87 ? O2' GDP 513 A 1 HETATM 17 C C1' GDP . . . D 3 35.616 30.523 28.096 1 19.11 ? C1' GDP 513 A 1 HETATM 18 N N9 GDP . . . D 3 35.65 31.914 27.607 1 18.93 ? N9 GDP 513 A 1 HETATM 19 C C8 GDP . . . D 3 35.745 32.369 26.326 1 18.49 ? C8 GDP 513 A 1 HETATM 20 N N7 GDP . . . D 3 35.779 33.658 26.18 1 18.3 ? N7 GDP 513 A 1 HETATM 21 C C5 GDP . . . D 3 35.692 34.123 27.474 1 18.22 ? C5 GDP 513 A 1 HETATM 22 C C6 GDP . . . D 3 35.665 35.464 27.981 1 17.96 ? C6 GDP 513 A 1 HETATM 23 O O6 GDP . . . D 3 35.678 36.498 27.354 1 19.61 ? O6 GDP 513 A 1 HETATM 24 N N1 GDP . . . D 3 35.56 35.538 29.377 1 17.3 ? N1 GDP 513 A 1 HETATM 25 C C2 GDP . . . D 3 35.485 34.419 30.177 1 18.54 ? C2 GDP 513 A 1 HETATM 26 N N2 GDP . . . D 3 35.377 34.649 31.496 1 18.21 ? N2 GDP 513 A 1 HETATM 27 N N3 GDP . . . D 3 35.526 33.162 29.713 1 17.3 ? N3 GDP 513 A 1 HETATM 28 C C4 GDP . . . D 3 35.62 33.061 28.37 1 17.73 ? C4 GDP 513 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #