data_1EFT
#
_model_server_result.job_id            9ZvRO1_O-ezHfhSXf_Lj0w 
_model_server_result.datetime_utc      '2025-04-08 07:12:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1eft 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":406}' 
#
_entry.id    1EFT 
#
_exptl.entry_id    1EFT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.3 
_cell.angle_gamma         90 
_cell.entry_id            1EFT 
_cell.length_a            150.7 
_cell.length_b            99.7 
_cell.length_c            40.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1EFT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 25 A THR 25 1_555 B MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc2 A OG1 THR 62 A THR 62 1_555 B MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc3 C O3G GNP . A GNP 406 1_555 B MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc4 C N3B GNP . A GNP 406 1_555 B MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? 
metalc ? metalc5 C O2B GNP . A GNP 406 1_555 B MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc6 B MG MG . A MG 407 1_555 D O HOH . A HOH 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc7 B MG MG . A MG 407 1_555 D O HOH . A HOH 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 129 n n 
PG O2G GNP sing 130 n n 
PG O3G GNP sing 131 n n 
PG N3B GNP sing 132 n n 
O2G HOG2 GNP sing 133 n n 
O3G HOG3 GNP sing 134 n n 
N3B PB GNP sing 135 n n 
N3B HNB3 GNP sing 136 n n 
PB O1B GNP doub 137 n n 
PB O2B GNP sing 138 n n 
PB O3A GNP sing 139 n n 
O2B HOB2 GNP sing 140 n n 
O3A PA GNP sing 141 n n 
PA O1A GNP doub 142 n n 
PA O2A GNP sing 143 n n 
PA O5' GNP sing 144 n n 
O2A HOA2 GNP sing 145 n n 
O5' C5' GNP sing 146 n n 
C5' C4' GNP sing 147 n n 
C5' "H5'2" GNP sing 148 n n 
C5' "H5'1" GNP sing 149 n n 
C4' O4' GNP sing 150 n n 
C4' C3' GNP sing 151 n n 
C4' H4' GNP sing 152 n n 
O4' C1' GNP sing 153 n n 
C3' O3' GNP sing 154 n n 
C3' C2' GNP sing 155 n n 
C3' H3' GNP sing 156 n n 
O3' HO3' GNP sing 157 n n 
C2' O2' GNP sing 158 n n 
C2' C1' GNP sing 159 n n 
C2' H2' GNP sing 160 n n 
O2' HO2' GNP sing 161 n n 
C1' N9 GNP sing 162 n n 
C1' H1' GNP sing 163 n n 
N9 C8 GNP sing 164 n y 
N9 C4 GNP sing 165 n y 
C8 N7 GNP doub 166 n y 
C8 H8 GNP sing 167 n n 
N7 C5 GNP sing 168 n y 
C5 C6 GNP sing 169 n y 
C5 C4 GNP doub 170 n y 
C6 O6 GNP doub 171 n n 
C6 N1 GNP sing 172 n y 
N1 C2 GNP sing 173 n y 
N1 HN1 GNP sing 174 n n 
C2 N2 GNP sing 175 n n 
C2 N3 GNP doub 176 n y 
N2 HN21 GNP sing 177 n n 
N2 HN22 GNP sing 178 n n 
N3 C4 GNP sing 179 n y 
#
_atom_sites.entry_id                     1EFT 
_atom_sites.fract_transf_matrix[1][1]    0.006636 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000616 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01003 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024982 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 407 407 MG MG . 
C 3 GNP A 1 406 406 GNP GNP . 
D 4 HOH A 1 408 408 HOH HOH . 
D 4 HOH A 2 409 409 HOH HOH . 
D 4 HOH A 3 410 410 HOH HOH . 
D 4 HOH A 4 411 411 HOH HOH . 
D 4 HOH A 5 412 412 HOH HOH . 
D 4 HOH A 6 413 413 HOH HOH . 
D 4 HOH A 7 414 414 HOH HOH . 
D 4 HOH A 8 415 415 HOH HOH . 
D 4 HOH A 9 416 416 HOH HOH . 
D 4 HOH A 10 417 417 HOH HOH . 
D 4 HOH A 11 418 418 HOH HOH . 
D 4 HOH A 12 419 419 HOH HOH . 
D 4 HOH A 13 420 420 HOH HOH . 
D 4 HOH A 14 421 421 HOH HOH . 
D 4 HOH A 15 422 422 HOH HOH . 
D 4 HOH A 16 423 423 HOH HOH . 
D 4 HOH A 17 424 424 HOH HOH . 
D 4 HOH A 18 425 425 HOH HOH . 
D 4 HOH A 19 426 426 HOH HOH . 
D 4 HOH A 20 427 427 HOH HOH . 
D 4 HOH A 21 428 428 HOH HOH . 
D 4 HOH A 22 429 429 HOH HOH . 
D 4 HOH A 23 430 430 HOH HOH . 
D 4 HOH A 24 431 431 HOH HOH . 
D 4 HOH A 25 432 432 HOH HOH . 
D 4 HOH A 26 433 433 HOH HOH . 
D 4 HOH A 27 434 434 HOH HOH . 
D 4 HOH A 28 435 435 HOH HOH . 
D 4 HOH A 29 436 436 HOH HOH . 
D 4 HOH A 30 437 437 HOH HOH . 
D 4 HOH A 31 438 438 HOH HOH . 
D 4 HOH A 32 439 439 HOH HOH . 
D 4 HOH A 33 440 440 HOH HOH . 
D 4 HOH A 34 441 441 HOH HOH . 
D 4 HOH A 35 442 442 HOH HOH . 
D 4 HOH A 36 443 443 HOH HOH . 
D 4 HOH A 37 444 444 HOH HOH . 
D 4 HOH A 38 445 445 HOH HOH . 
D 4 HOH A 39 446 446 HOH HOH . 
D 4 HOH A 40 447 447 HOH HOH . 
D 4 HOH A 41 448 448 HOH HOH . 
D 4 HOH A 42 449 449 HOH HOH . 
D 4 HOH A 43 450 450 HOH HOH . 
D 4 HOH A 44 451 451 HOH HOH . 
D 4 HOH A 45 452 452 HOH HOH . 
D 4 HOH A 46 453 453 HOH HOH . 
D 4 HOH A 47 454 454 HOH HOH . 
D 4 HOH A 48 455 455 HOH HOH . 
D 4 HOH A 49 456 456 HOH HOH . 
D 4 HOH A 50 457 457 HOH HOH . 
D 4 HOH A 51 458 458 HOH HOH . 
D 4 HOH A 52 459 459 HOH HOH . 
D 4 HOH A 53 460 460 HOH HOH . 
D 4 HOH A 54 461 461 HOH HOH . 
D 4 HOH A 55 462 462 HOH HOH . 
D 4 HOH A 56 463 463 HOH HOH . 
D 4 HOH A 57 464 464 HOH HOH . 
D 4 HOH A 58 465 465 HOH HOH . 
D 4 HOH A 59 466 466 HOH HOH . 
D 4 HOH A 60 467 467 HOH HOH . 
D 4 HOH A 61 468 468 HOH HOH . 
D 4 HOH A 62 469 469 HOH HOH . 
D 4 HOH A 63 470 470 HOH HOH . 
D 4 HOH A 64 471 471 HOH HOH . 
D 4 HOH A 65 472 472 HOH HOH . 
D 4 HOH A 66 473 473 HOH HOH . 
D 4 HOH A 67 474 474 HOH HOH . 
D 4 HOH A 68 475 475 HOH HOH . 
D 4 HOH A 69 476 476 HOH HOH . 
D 4 HOH A 70 477 477 HOH HOH . 
D 4 HOH A 71 478 478 HOH HOH . 
D 4 HOH A 72 479 479 HOH HOH . 
D 4 HOH A 73 480 480 HOH HOH . 
D 4 HOH A 74 481 481 HOH HOH . 
D 4 HOH A 75 482 482 HOH HOH . 
D 4 HOH A 76 483 483 HOH HOH . 
D 4 HOH A 77 484 484 HOH HOH . 
D 4 HOH A 78 485 485 HOH HOH . 
D 4 HOH A 79 486 486 HOH HOH . 
D 4 HOH A 80 487 487 HOH HOH . 
D 4 HOH A 81 488 488 HOH HOH . 
D 4 HOH A 82 489 489 HOH HOH . 
D 4 HOH A 83 490 490 HOH HOH . 
D 4 HOH A 84 491 491 HOH HOH . 
D 4 HOH A 85 492 492 HOH HOH . 
D 4 HOH A 86 493 493 HOH HOH . 
D 4 HOH A 87 494 494 HOH HOH . 
D 4 HOH A 88 495 495 HOH HOH . 
D 4 HOH A 89 496 496 HOH HOH . 
D 4 HOH A 90 497 497 HOH HOH . 
D 4 HOH A 91 498 498 HOH HOH . 
D 4 HOH A 92 499 499 HOH HOH . 
D 4 HOH A 93 500 500 HOH HOH . 
D 4 HOH A 94 502 502 HOH HOH . 
D 4 HOH A 95 503 503 HOH HOH . 
D 4 HOH A 96 504 504 HOH HOH . 
D 4 HOH A 97 505 505 HOH HOH . 
D 4 HOH A 98 506 506 HOH HOH . 
D 4 HOH A 99 507 507 HOH HOH . 
D 4 HOH A 100 509 509 HOH HOH . 
D 4 HOH A 101 511 511 HOH HOH . 
D 4 HOH A 102 512 512 HOH HOH . 
D 4 HOH A 103 513 513 HOH HOH . 
D 4 HOH A 104 515 515 HOH HOH . 
D 4 HOH A 105 516 516 HOH HOH . 
D 4 HOH A 106 517 517 HOH HOH . 
D 4 HOH A 107 518 518 HOH HOH . 
D 4 HOH A 108 519 519 HOH HOH . 
D 4 HOH A 109 521 521 HOH HOH . 
D 4 HOH A 110 523 523 HOH HOH . 
D 4 HOH A 111 524 524 HOH HOH . 
D 4 HOH A 112 525 525 HOH HOH . 
D 4 HOH A 113 527 527 HOH HOH . 
D 4 HOH A 114 528 528 HOH HOH . 
D 4 HOH A 115 529 529 HOH HOH . 
D 4 HOH A 116 530 530 HOH HOH . 
D 4 HOH A 117 531 531 HOH HOH . 
D 4 HOH A 118 532 532 HOH HOH . 
D 4 HOH A 119 534 534 HOH HOH . 
D 4 HOH A 120 535 535 HOH HOH . 
D 4 HOH A 121 537 537 HOH HOH . 
D 4 HOH A 122 538 538 HOH HOH . 
D 4 HOH A 123 539 539 HOH HOH . 
D 4 HOH A 124 540 540 HOH HOH . 
D 4 HOH A 125 541 541 HOH HOH . 
D 4 HOH A 126 542 542 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . C 3 105.348 -0.601 40.057 1 11.41 ? PG GNP 406 A 1 
HETATM 2 O O1G GNP . . . C 3 105.572 -0.578 41.522 1 14.08 ? O1G GNP 406 A 1 
HETATM 3 O O2G GNP . . . C 3 106.362 -1.29 39.158 1 24.4 ? O2G GNP 406 A 1 
HETATM 4 O O3G GNP . . . C 3 103.991 -1.095 39.557 1 10.93 ? O3G GNP 406 A 1 
HETATM 5 N N3B GNP . . . C 3 104.981 0.811 39.477 1 10.02 ? N3B GNP 406 A 1 
HETATM 6 P PB GNP . . . C 3 104.672 1.633 38.193 1 21.4 ? PB GNP 406 A 1 
HETATM 7 O O1B GNP . . . C 3 105.311 1.223 36.959 1 10.46 ? O1B GNP 406 A 1 
HETATM 8 O O2B GNP . . . C 3 103.132 1.616 38.095 1 26.12 ? O2B GNP 406 A 1 
HETATM 9 O O3A GNP . . . C 3 104.904 3.172 38.299 1 12.87 ? O3A GNP 406 A 1 
HETATM 10 P PA GNP . . . C 3 103.958 4.346 38.606 1 2 ? PA GNP 406 A 1 
HETATM 11 O O1A GNP . . . C 3 103.448 4.25 39.991 1 10.31 ? O1A GNP 406 A 1 
HETATM 12 O O2A GNP . . . C 3 102.849 4.531 37.686 1 11.51 ? O2A GNP 406 A 1 
HETATM 13 O O5' GNP . . . C 3 104.779 5.667 38.347 1 8.47 ? O5' GNP 406 A 1 
HETATM 14 C C5' GNP . . . C 3 106.014 5.736 39.078 1 17.04 ? C5' GNP 406 A 1 
HETATM 15 C C4' GNP . . . C 3 106.546 7.16 39.268 1 17.78 ? C4' GNP 406 A 1 
HETATM 16 O O4' GNP . . . C 3 106.852 7.701 38.019 1 21.91 ? O4' GNP 406 A 1 
HETATM 17 C C3' GNP . . . C 3 105.474 8.075 39.736 1 17.01 ? C3' GNP 406 A 1 
HETATM 18 O O3' GNP . . . C 3 106.024 8.982 40.665 1 24.76 ? O3' GNP 406 A 1 
HETATM 19 C C2' GNP . . . C 3 104.943 8.775 38.536 1 18.13 ? C2' GNP 406 A 1 
HETATM 20 O O2' GNP . . . C 3 104.515 10.097 38.882 1 21.15 ? O2' GNP 406 A 1 
HETATM 21 C C1' GNP . . . C 3 106.078 8.836 37.698 1 13.44 ? C1' GNP 406 A 1 
HETATM 22 N N9 GNP . . . C 3 105.66 8.85 36.312 1 3.7 ? N9 GNP 406 A 1 
HETATM 23 C C8 GNP . . . C 3 104.78 8.119 35.597 1 7.9 ? C8 GNP 406 A 1 
HETATM 24 N N7 GNP . . . C 3 104.659 8.464 34.342 1 2.12 ? N7 GNP 406 A 1 
HETATM 25 C C5 GNP . . . C 3 105.547 9.534 34.266 1 11.98 ? C5 GNP 406 A 1 
HETATM 26 C C6 GNP . . . C 3 105.896 10.365 33.184 1 15.74 ? C6 GNP 406 A 1 
HETATM 27 O O6 GNP . . . C 3 105.392 10.376 32.07 1 20.74 ? O6 GNP 406 A 1 
HETATM 28 N N1 GNP . . . C 3 106.873 11.301 33.503 1 15.25 ? N1 GNP 406 A 1 
HETATM 29 C C2 GNP . . . C 3 107.443 11.426 34.741 1 22.71 ? C2 GNP 406 A 1 
HETATM 30 N N2 GNP . . . C 3 108.412 12.33 34.858 1 22.46 ? N2 GNP 406 A 1 
HETATM 31 N N3 GNP . . . C 3 107.107 10.66 35.776 1 14.97 ? N3 GNP 406 A 1 
HETATM 32 C C4 GNP . . . C 3 106.159 9.743 35.456 1 9.41 ? C4 GNP 406 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           220 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           32 
#